Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq186836 84.2 2e-11 >seq186836 Length=3669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| || ||||| || || || || || || | ||||| |||| || || | Sbjct 689 CATGCAGGTTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTCGAGGTAGAGAGCTC 630 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || ||| || ||| ||||| |||||||| ||||| ||||| Sbjct 629 TGATACCATTGACAATGTCAAAGCCAAGATTCAAGATAAGGAGGGTATCCCGCCGGATCA 570 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||||| | || | || ||| || || | || |||| | | | | | |||||| || Sbjct 569 GCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAA 510 Query 25354 TATTCAAAAAGAATCCACC 25372 ||| || ||||| |||||| Sbjct 509 TATCCAGAAAGAGTCCACC 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443921687529600