Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq161483 163 4e-34 >seq161483 Length=5526 Score = 163 bits (180), Expect = 4e-34 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || || ||||| ||||||||| |||| | ||| ||| |||| || Sbjct 1649 ATCTACAAAGTACTTAAGCAAGTGCACCCCGACACCGGT-----ATC-TCCTCCAAGGCC 1596 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || || |||||||| |||| | |||| | | |||||| | Sbjct 1595 ATGTCCATCATGAACTCCTTCGTGAACGACATCTTCGAGAGGATCGCCGCTGAGGCCAGC 1536 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||||| || |||||||||| ||| ||| | | || ||||||||||| || || Sbjct 1535 CGCTTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACTGCTGTC 1476 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || ||| ||| ||| |||||| ||||||||| || || ||||||| Sbjct 1475 CGTCTCCTCCTGCCCGGTGAATTGGCCAAGCACGCCGTGTCTGAAGGCACCA 1424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7157481081586360