Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq58964 136 2e-27 seq13283 132 3e-26 seq171660 129 4e-25 seq7966 129 4e-25 seq153096 122 5e-23 seq150930 118 7e-22 seq117973 113 3e-20 seq192635 111 1e-19 seq186836 105 4e-18 seq165785 105 4e-18 seq115535 105 4e-18 seq6123 105 4e-18 seq115308 93.3 3e-14 seq1224 89.7 3e-13 >seq58964 Length=436 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| ||||| ||| || |||||||| ||||||| ||||| | Sbjct 110 AGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTG 169 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || ||||| || | | ||| ||||| || || | || || Sbjct 170 CCGTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCT 229 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | || ||| || |||||||||| ||| |||||||||| || Sbjct 230 TTGTCCTGAATCTTT-GCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGT 288 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || || ||||||||||| ||||| Sbjct 289 AATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCAT 327 >seq13283 Length=967 Score = 132 bits (146), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || |||||| |||||||||||| ||||| || | |||||| | Sbjct 582 AGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTT 641 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || || | ||| ||||| || || | |||||| Sbjct 642 CCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 701 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||| || || ||| ||||| ||| ||||||||||| | Sbjct 702 TTGTCT-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACTTCCACAAT 760 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| | || || ||||| || |||||| Sbjct 761 GATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 800 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||||||||||||||| || ||||| ||| | || ||||| ||||||| Sbjct 800 GCCACCACGAAGACGCAACACCAAGTGAAGAGTTGATTCCGTCTGGATGTTGTAATCTGC 859 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | || || |||||||| || ||||| || | | ||| ||||| || || Sbjct 860 AAGAGTGTGACCATCCTCTAGTTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGG 919 Query 34599 CACTCCCTCCTTGTC 34613 | ||||||||||| Sbjct 920 AATGCCCTCCTTGTC 934 >seq171660 Length=1062 Score = 129 bits (142), Expect = 4e-25 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||||||| ||| ||||| ||||| || || | ||||| ||| |||| ||| Sbjct 404 ACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTCA 345 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || | | ||||||||||| || | ||||||||||||| | Sbjct 344 AGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 285 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 |||||| | ||| || | ||| ||||| ||| || || || | ||| || || || Sbjct 284 ATCTTT-GCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTT 226 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCA--TGTTGA 34711 || || | ||||||||||| ||||||| |||||| Sbjct 225 GCCTGTGAGGGTTTTCACAAAGATCTGCATCTGTTGA 189 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||| || |||| ||| |||| |||| || | |||||||| ||||| Sbjct 842 TCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAG 783 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| || || || || | ||||||||||| |||| || | || || | Sbjct 782 ATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATC-TTCGCCTTGACATT 724 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 |||||| || ||| ||||| |||| ||| || || || || || | ||| || || Sbjct 723 GTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTAC 664 Query 34695 AAAAATCTGCAT 34706 ||| |||||||| Sbjct 663 AAAGATCTGCAT 652 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || ||||| ||||||||| || || ||||| | ||| || || Sbjct 641 AGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGCAAGGGTGCGG 582 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| |||||||| || | | ||| || || || || | |||||| Sbjct 581 CCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGTATGCCCTCC 522 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| |||| || || || ||||| || ||||| || |||| || Sbjct 521 TTGTCCTGGATC-TTTGCCTTGACATTATCGATTGTATCAGAACTCTCAACCTCCAATGT 463 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || | || || ||||| ||||||||| Sbjct 462 GATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 423 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 34524 AATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACG 34583 |||||| || |||| ||| |||| |||| || | |||||||| ||||| || | | Sbjct 1062 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 1003 Query 34584 CTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTG 34642 ||| || || || || | ||||||||||| ||| ||||| || || | ||||| Sbjct 1002 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGAT-TTTTGCCTTGACATTGTCAATTG 944 Query 34643 TGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCT 34702 | || ||| ||||| |||| ||| || || || || || | ||| || ||||| |||| Sbjct 943 TATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCT 884 Query 34703 GCAT 34706 |||| Sbjct 883 GCAT 880 >seq7966 Length=1209 Score = 129 bits (142), Expect = 4e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || |||||| |||||||||||| ||||| |||| |||||| | Sbjct 879 AGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTT 938 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || ||||| ||||| || || | ||| ||||| || || | |||||| Sbjct 939 CCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 998 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| ||| | ||| || || || ||||| ||| |||||||||| || Sbjct 999 TTATC-CTGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCACTTCCAAAGT 1057 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| | || || ||||| || |||||| Sbjct 1058 GATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 1097 >seq153096 Length=4879 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||||||||| ||| |||||| || || || ||||| | Sbjct 3214 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 3155 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||||| | || || | || |||||||| || || || | ||| |||||||| || Sbjct 3154 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 3095 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || ||| | || ||||| |||||| || Sbjct 3094 ATTCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 3036 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || ||||||| |||||||| ||||| |||||| Sbjct 3035 CTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAAATTTGCATG 2987 Score = 114 bits (126), Expect = 8e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 ||| ||||| | ||||| | ||||| || || ||| |||||| |||||||| ||||| Sbjct 3674 GTCACCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 3615 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| || || || || |||||||| || || | || |||||||| Sbjct 3614 AGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGG 3555 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCT 34654 || | || ||||| || |||||| | ||| || || ||| || || ||||| Sbjct 3554 TGGGATCCCTTCCTTATCCTGGATCTTG-GCTTTGACATTATCAATGGTATCCGAGCTCT 3496 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || |||| || || || || || || || || ||||||||||||||||| Sbjct 3495 CAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 3444 >seq150930 Length=8867 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| || |||||| || || || ||||| | ||| || || Sbjct 671 AGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGG 612 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | |||||| |||||||| || | ||||||| Sbjct 611 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCC 552 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | |||||| | ||| ||||| |||||| || | ||| Sbjct 551 TTGTC-CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGT 493 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | |||||||| ||||| ||||| Sbjct 492 GATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 454 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||| || ||| ||||| || ||||| || || | Sbjct 1364 CCACCACGAAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 1305 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || || ||||| || | | ||| ||||| || || Sbjct 1304 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 1245 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || |||||| ||||||||| Sbjct 1244 ATACCCTCCTTGTCCTGGATC-TTAGCCTTCACATTGTCGATGGTGTCTGAGCTCTCCAC 1186 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || || || || ||||| |||||||| Sbjct 1185 CTCCAAGGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 1138 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| || |||||| || || || || |||| || || || Sbjct 899 AGACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGG 840 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || |||||||| || | | ||| ||||| || || | || ||| Sbjct 839 CCATCCTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 780 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | ||| ||||| |||||| || || | ||| Sbjct 779 TTGTC-CTGAATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGT 721 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || ||||| |||||||| Sbjct 720 GATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 682 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || || || || |||| || || ||| | || || || || || |||||||| Sbjct 1557 CTCCTTCTGGATATTGTAGTCTGCGAGGGTACGCCCATCCTCGAGCTGCTTGCCGGCAAA 1498 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | | ||| ||||| || || | |||||||||||| ||| || | || || Sbjct 1497 GATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCT-TGAATCTTGGCCTTCACAT 1439 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| |||||| ||||||||| || | ||| || || || || || | || || | Sbjct 1438 TGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTAAGAGTCTTGA 1379 Query 34694 CAAAAATCTGCAT 34706 ||||||||||||| Sbjct 1378 CAAAAATCTGCAT 1366 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| || ||| ||||| || ||||| ||||||| || || || Sbjct 1127 AGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGG 1068 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || |||||||| || | | ||| ||||| || || | |||||| Sbjct 1067 CCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCC 1008 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || | ||| ||||| |||||| || | ||| Sbjct 1007 TTGTC-CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGT 949 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || || || |||||||| Sbjct 948 GATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 910 >seq117973 Length=1091 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||||| ||| ||| ||||||||||| || || | ||||||||| |||| || Sbjct 686 CACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCCTC 627 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || ||||| || | | || ||||| || || | ||||||||||||| Sbjct 626 GAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTG 567 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||| |||| || || | ||| ||||| ||| || || || | ||| || || | Sbjct 566 GATC-TTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCT 508 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || | ||||||||||| |||||||| Sbjct 507 TGCCTGTGAGGGTTTTCACAAAGATCTGCAT 477 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| ||||| ||| ||| ||||| || || ||||||| Sbjct 931 CCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCG 872 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || || || ||||| |||||||| || | | ||| || || || || Sbjct 871 AGTGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGG 812 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| |||| || || || |||||||| |||||| || Sbjct 811 ATGCCCTCCTTGTC-CTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCTCAAC 753 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || || | || || ||||| ||||||||| Sbjct 752 CTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 704 >seq192635 Length=3999 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || || | ||||| |||||||| |||||| || ||||| || || | Sbjct 1881 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 1822 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || |||| || || ||||| ||||| || || | ||||| |||||||||| Sbjct 1821 CGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 1762 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| ||| || | || || | || ||||| | |||| Sbjct 1761 GGATGCCCTCCTTGTCT-TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCC 1703 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || |||| || ||||| || || |||| |||||||| || |||||||| |||| Sbjct 1702 ACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTGA 1648 >seq186836 Length=3669 Score = 105 bits (116), Expect = 4e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || || || || |||| || || || |||| || || || Sbjct 714 TGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGGCCGTCCTCGAGCTGC 773 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || | | ||||||||| || || | ||||||||||| |||| || Sbjct 774 TTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATC-TT 832 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| | || ||||| |||||| || || | ||| || || || ||||| Sbjct 833 GGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCTACCTCGAGGGTGATGGTCTTGCCGGT 892 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGATTG 34714 || || || ||||| ||||||||| | |||| Sbjct 893 TAGGGTCTTTACAAAGATCTGCATGATTATTG 924 >seq165785 Length=1301 Score = 105 bits (116), Expect = 4e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || || || || || | || || || |||| || || || Sbjct 1233 TGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGC 1174 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || | | |||||| || || || | ||||||||||| |||| || Sbjct 1173 TTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATC-TT 1115 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| | || ||||| ||||||||| || | ||| | || || ||||| Sbjct 1114 GGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGACGGTCTTGCCGGT 1055 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGATTG 34714 | ||| |||||||| ||||||||| |||||| Sbjct 1054 AAGCGTCTTCACAAAGATCTGCATGATGATTG 1023 >seq115535 Length=1238 Score = 105 bits (116), Expect = 4e-18 Identities = 171/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | ||||| |||||||| |||||| || ||||| || || | Sbjct 595 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 536 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || |||| || || || || ||||| ||||| | | ||| ||||| || || Sbjct 535 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAATATGAGCCTCTGCTGGTCGGGAGGG 476 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || ||||| |||||| || Sbjct 475 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGAC 417 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT----GATTG 34714 || | ||| || || || ||||||| |||||||| || ||||||||| | ||||| Sbjct 416 CTCGAGGGTGATAGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATGATTTGGGATTG 357 Query 34715 TAT 34717 ||| Sbjct 356 TAT 354 >seq6123 Length=1345 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| ||||| || ||| ||||||||||||||| ||||| | || || || Sbjct 1200 AGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGG 1141 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | | ||| ||||| || || | ||||| Sbjct 1140 CCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCT 1081 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| |||| || ||| | ||| ||||| ||||| || |||| ||| Sbjct 1080 TTATC-CTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGT 1022 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| ||||| || || | || |||||||| || |||||| Sbjct 1021 TATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCATG 982 >seq115308 Length=3903 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||||||||||| || || || | || || | || Sbjct 3588 TGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCCTCCAACTGC 3647 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | | ||| ||||| || || | ||||||||||| |||| || Sbjct 3648 TTGCCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATC-TT 3706 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||||||||| || | ||| || || || || || Sbjct 3707 GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCCGT 3766 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || |||||||| || ||||||||| Sbjct 3767 TAGGGTTTTCACGAATATCTGCATG 3791 >seq1224 Length=2434 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||||||||| || |||||| || || || ||||| | ||| || | | || || Sbjct 1919 CACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 1978 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | ||| || || || || || || | ||| || ||||| || | || ||||| || Sbjct 1979 CAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 2038 Query 34617 GATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||| || | || ||| || |||||| || |||||| || |||| ||| || || | Sbjct 2039 GATC-TTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTCT 2097 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || ||||| || |||||||| Sbjct 2098 TCCCTGTCAAAGTCTTCACGAATATCTGCAT 2128 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| || || || |||||| || || || ||||| | || || | |||| || Sbjct 2147 CACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTC 2206 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | || |||||||| || || || | ||| || ||||| || | |||||||||||| Sbjct 2207 CAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTG 2266 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||| || | || ||| | ||| ||||| |||||| || || | || || || | Sbjct 2267 GATC-TTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCT 2325 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | || ||||| || |||||||| Sbjct 2326 TTCCGGTAAGGGTCTTCACGAAGATCTGCAT 2356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313921097031740