Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq155405 86.0 5e-12
seq21874 86.0 5e-12
>seq155405
Length=1148
Score = 86.0 bits (94), Expect = 5e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 25148 AGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGA 25207
|||||| || || || |||||||| |||||||| | || ||| | || | |||||
Sbjct 526 AGATCAGCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGA 467
Query 25208 TTACAATATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||||||| |||||||| |||||||||||| |||||
Sbjct 466 TTACAATATCCAAAAGGAGTCTACTCTTCACCTGGTG 430
>seq21874
Length=1446
Score = 86.0 bits (94), Expect = 5e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| ||||| | || |||||||| ||| | || ||||| || || |||||||||
Sbjct 1399 GATAAGGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCCGGTAAGCAATTGGAA 1340
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | |||| | || |||||||| || |||||||| || ||||||||| | || |||
Sbjct 1339 GATGGAAGAACTCTTGCAGATTACAACATCCAAAAGGAGTCAACTCTTCACCTAGTTTTA 1280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409178856648482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |