Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq16442 143 3e-29
seq40208 125 7e-24
seq167275 118 1e-21
seq155405 118 1e-21
seq33539 118 1e-21
seq23575 113 5e-20
seq136929 109 6e-19
seq20182 107 2e-18
seq173346 100 3e-16
seq163152 98.7 1e-15
seq194843 95.1 1e-14
seq294161 93.3 4e-14
seq55815 86.0 6e-12
seq41891 82.4 8e-11
>seq16442
Length=1968
Score = 143 bits (158), Expect = 3e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| || ||||| || || ||||| | || || || ||
Sbjct 213 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 272
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | | |||| || || | ||||| ||||||||||| |||||
Sbjct 273 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGAC 332
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || ||||||| ||| || |||||||| || |||| || || ||| |||||||
Sbjct 333 CAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGACTAC 392
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
||||||||||||||| | || || || || ||| | ||| | | || ||||
Sbjct 393 AACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGCCTCCGCGGTGGCG 444
>seq40208
Length=2036
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || || ||||| |||| ||||| | ||
Sbjct 143 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 202
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| || || ||||| | |||||
Sbjct 203 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCTCCCGACCA 261
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || |||| || || | |||||||||
Sbjct 262 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGACTACAA 321
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| | || || || || ||| | || | ||||||||
Sbjct 322 CATCCAGAAGGAGTCAACTCTCCACCTGGTGCTCCGTCTCAGGGGCGG 369
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || |||||||| |||| || || | ||
Sbjct 599 ATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 658
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| |||||| || || | ||||| ||||| || ||| |||| ||
Sbjct 659 GACACGATTGACAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCGGATCA 717
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || ||| |||| |||| | ||||| ||| |||||
Sbjct 718 GCAGAGATTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAA 777
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | || || || | ||| | || |||||||| ||
Sbjct 778 TATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGG 825
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||||||||| | |||||||| | ||||||| ||| || || ||||| ||
Sbjct 8 GACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAG 67
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| || || | |||||||||||||||||||||| | || || || || ||| |
Sbjct 68 GACGGCCGGACTTTGGCCGACTACAACATCCAGAAGGAGTCAACTCTCCACCTGGTGCTC 127
Query 40903 CGCTTGAGGGGCGG 40916
|| | ||||||||
Sbjct 128 CGTCTCAGGGGCGG 141
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || || ||||| |||| ||||| | ||
Sbjct 371 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 430
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| || || |||||| | || ||
Sbjct 431 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCAGATCA 489
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| ||| || || ||||| || |||| | ||| | || |||||
Sbjct 490 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACAA 549
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||||||||| | || || ||| | |||
Sbjct 550 CATCCAGAAGGAGTCAACCCTCCATTTGGTG 580
>seq167275
Length=2206
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| ||||| || |||||| |||| || ||| | |
Sbjct 1489 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCTCT 1430
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| ||| || | ||||| ||||| |||||| | ||||||
Sbjct 1429 GACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAG 1370
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | || |||| || ||||| ||||| || |||| || || || |||||||||
Sbjct 1369 CAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACAAC 1310
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || || ||| |||| || || || |||
Sbjct 1309 ATTCAAAAAGAGTCCACCCTCCACCTGGTG 1280
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || |||||||| | || || || | |
Sbjct 1261 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 1202
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| ||| |||| ||||| |||||||||||| | || |||
Sbjct 1201 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 1142
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || ||||||||||| || || | || || ||| || |||||
Sbjct 1141 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTACAAT 1082
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||| || ||| |||| || || || |||
Sbjct 1081 ATCCAAAAAGAGTCCACCCTCCACCTGGTG 1052
>seq155405
Length=1148
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| ||||| ||||||||| | || || ||| | |
Sbjct 867 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCTCT 808
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||| | ||| || | ||||| ||||| || ||| |||||||
Sbjct 807 GACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAA 748
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | || |||| || ||||| ||||| || |||| ||| || ||| |||||||||
Sbjct 747 CAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGACTACAAC 688
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
||||| || ||| |||| || ||
Sbjct 687 ATCCAAAAAGAGTCCACTCTCCA 665
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || |||||||| | || || || |
Sbjct 639 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGTTCT 580
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||||| ||| || | ||||| |||||||| ||| | || |||
Sbjct 579 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 520
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || ||||||||||| || || | |||||||| ||| |||||
Sbjct 519 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 460
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||| |||||| | || || || || |||
Sbjct 459 ATCCAAAAGGAGTCTACTCTTCACCTGGTG 430
Score = 91.5 bits (100), Expect = 2e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || ||||| ||||| || || || || |||||| | || || ||| | |
Sbjct 184 AATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTC 125
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
||| | | | | |||||| |||||| | ||||| ||||| |||||| | || ||
Sbjct 124 CGATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCA 65
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || |||||| |||| |||| | || || ||||||||
Sbjct 64 GCAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAA 5
Query 40869 CAT 40871
|||
Sbjct 4 CAT 2
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || ||||| ||||| || || || || |||||| | || || ||| | |
Sbjct 412 AATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCCTGGAGGTGGAAAGCTC 353
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
||| | | | | |||||| || || | ||||| ||||| || ||| | || ||
Sbjct 352 CGATACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCA 293
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || |||||| |||| |||| | || || ||||||||
Sbjct 292 GCAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAA 233
Query 40869 CATCCAGAAGGA 40880
||| || |||||
Sbjct 232 CATTCAAAAGGA 221
>seq33539
Length=831
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| || ||||| || || ||||| | || || || ||
Sbjct 205 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 146
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | | |||| || || | ||||| ||||||||||| ||||
Sbjct 145 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCTGGAC 86
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|||||||| | |||| || || ||| |||| || |||| || || ||| |||||||
Sbjct 85 CAGCAACGCGTTATCTTCGTCGGAAAATAGCTCGAGGACGGCCGGACTCTCGCCGACTAC 26
Query 40867 AACATCCAGAAGGAGGCCACGCT 40889
||||||||||||||| | || ||
Sbjct 25 AACATCCAGAAGGAGTCGACTCT 3
>seq23575
Length=1941
Score = 113 bits (124), Expect = 5e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || ||||| || ||||| ||| ||||| |||| || || | ||
Sbjct 1391 ATGCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTCC 1450
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||| | || || | ||||| ||||||||||| | || ||
Sbjct 1451 GACACCATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCA 1509
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | ||||||| || || || ||||| || |||| || |||||| ||||||||
Sbjct 1510 ACAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAA 1569
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| | || || || || |||
Sbjct 1570 TATCCAGAAGGAGTCGACTCTCCACCTCGTG 1600
>seq136929
Length=1332
Score = 109 bits (120), Expect = 6e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 40682 TCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741
||| || ||||| || || || || || || || ||||| ||| ||||| || | ||||
Sbjct 109 TCCCAATCATGCAGATCTTTGTGAAGACCCTAACCGGCAAGACCGTCACCCTCTATGTCG 168
Query 40742 AAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800
| | |||||| | | | |||| |||| | || || | ||||| |||||||||||
Sbjct 169 AGAGCTCCGACACCATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCT 227
Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860
| || || || | ||||||| || || || ||||| || |||| | |||||| |
Sbjct 228 CCAGATCAACAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGGACCCTCGCC 287
Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||| |||||||||||| | || || || || |||
Sbjct 288 GACTACAATATCCAGAAGGAGTCGACTCTCCACCTCGTG 326
>seq20182
Length=796
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || || || ||||||||| | || ||||| | |
Sbjct 600 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 541
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || |||| ||||| || ||||| ||| | |||||
Sbjct 540 GACACCATTGACAACG-TCAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 482
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || || ||||| || || | |||||||| ||||||||
Sbjct 481 GCAGAGGCTCATCTTTGCCGGGAAGCAGCTTGAGGATGGCCGCACCCTAGCAGACTACAA 422
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| | || || ||| | |||
Sbjct 421 TATCCAGAAGGAGTCTACCCTCCATTTGGTG 391
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||||| | || || || | |
Sbjct 372 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT 313
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || |||| ||||| ||||| ||||| | ||||||
Sbjct 312 GACACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 253
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || || || ||||| || || | |||||||| || ||||||
Sbjct 252 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACAAC 193
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||||||| |||| || ||| | |||
Sbjct 192 ATCCAGAAGGAATCCACCCTTCATTTGGTG 163
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827
|||| || |||| ||||| ||||| || ||| |||||||||| || || |||| ||
Sbjct 750 AAGGCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGTCTGATCTTTGCT 691
Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887
||||| ||||| || || | || || || || |||||||||||||||||| | ||
Sbjct 690 GGCAAGCAGCTTGAGGATGGCCGAACTCTTGCTGATTACAACATCCAGAAGGAGTCGACC 631
Query 40888 CTGCATCTAGTG 40899
|| ||| | |||
Sbjct 630 CTCCATTTGGTG 619
>seq173346
Length=301
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40719 CAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAA 40777
||| ||||||||| |||| || || | |||||| | | | |||| |||| | || |
Sbjct 1 CAAGACCATCACCCTCGAGGTAGAGAGCTCCGACACCATCGACAACG-TCAAAGCCAAGA 59
Query 40778 TTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGC 40837
| | ||||| ||||||||||| | ||||| || | ||||||| || || || ||||
Sbjct 60 TCCAGGACAAGGAGGGCATCCCTCCAGACCAACAGAGGCTCATCTTTGCCGGAAAGCAGC 119
Query 40838 TGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAG 40897
| || |||| || |||||| |||||||| |||||||||||| | || || || || |
Sbjct 120 TCGAGGACGGCCGGACCCTCGCAGACTACAATATCCAGAAGGAGTCGACTCTCCACCTCG 179
Query 40898 TG 40899
||
Sbjct 180 TG 181
>seq163152
Length=1956
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || || ||||| |||| ||||| | |
Sbjct 1949 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 1890
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||||| || || | ||||| ||||| || ||| |||||||
Sbjct 1889 GATACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 1831
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| ||| || || ||| |||| || | || || | ||| |||||
Sbjct 1830 GCAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAA 1771
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || ||| | |||
Sbjct 1770 TATCCAGAAGGAGTCCACCCTCCATTTGGTG 1740
Score = 82.4 bits (90), Expect = 8e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| |||||||| | || || || | |
Sbjct 1493 ATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTCG 1434
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| | || || | || || ||||| ||||| ||||||||
Sbjct 1433 GATACCATTGATAATGTCAAAGCCAAGATCCAGGATAAGGAGGGGATCCCACCGGACCAG 1374
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | | |||| || ||||| ||||| || |||| || ||||| || ||||||
Sbjct 1373 CAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTACAAC 1314
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||||||| |||| || ||
Sbjct 1313 ATTCAGAAGGAGTCCACCCTTCA 1291
>seq194843
Length=321
Score = 95.1 bits (104), Expect = 1e-14
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 40725 CATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCG 40783
||||||| | || ||||| | | |||| | | | |||| |||||| || |||| |
Sbjct 321 CATCACCCTTGAGGTCGAGAGCTCTGACACCATTGACAACG-TCAAGGCTAAGATTCAGG 263
Query 40784 ACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACG 40843
|||| || ||||| || |||||||||| | ||||||| || || || ||||| || |
Sbjct 262 ACAAGGAAGGCATTCCGCCGGACCAGCAGAGGCTCATCTTTGCAGGGAAGCAGCTTGAGG 203
Query 40844 ACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
| | |||||||| |||||||| |||||||||||| | || || ||| | |||
Sbjct 202 ATGGCCGCACCCTAGCTGACTACAATATCCAGAAGGAGTCGACCCTCCATTTGGTG 147
>seq294161
Length=603
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || || ||||| |||| ||||| | |
Sbjct 8 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 67
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||||| || || | ||||| || || ||||| |||||||
Sbjct 68 GATACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCA 126
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| || || || ||||| || || | || ||||| || |||||
Sbjct 127 GCAGAGGTTGATCTTTGCAGGGAAGCAGCTCGAGGATGGTCGTACCCTGGCTGATTACAA 186
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||||||||||||| | || |||||
Sbjct 187 CATCCAGAAGGAGTCGACTTTGCAT 211
>seq55815
Length=911
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || ||||||||||||| || || || ||| | |
Sbjct 134 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCATTGTGGAAGTGGAAAGCTCT 193
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | || | ||||||| ||||| ||||| || ||| | |||||
Sbjct 194 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAA 253
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | | || | || ||||| ||||| || || | | || || ||||| ||
Sbjct 254 CAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGTTGACTATAAT 313
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || |||||| |||| ||||| |||||
Sbjct 314 ATTCAAAAGGAGTCCACTCTGCACTTAGTG 343
>seq41891
Length=414
Score = 82.4 bits (90), Expect = 8e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAG 40770
|| || || || ||||||||| | || || || | | |||| | | | | | |||
Sbjct 2 CTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCAGACACCATTGACAATGTGAAG 61
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
| || |||| || || ||||| || || | |||||||| | || |||| || |||
Sbjct 62 GCCAAGATTCAAGATAAGGAGGGGATTCCACCCGACCAGCAGAGGCTTATCTTTGCCGGC 121
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | ||| |||||| |||||||| |||||||||||| | || ||
Sbjct 122 AAGCAGCTCGAGGATGGGCGTACCCTCGCAGACTACAATATCCAGAAGGAGTCTACCCTT 181
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 182 CACCTTGT 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513137952720880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |