Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq16442 122 1e-22 seq302619 118 1e-21 seq167275 118 1e-21 seq1583 116 4e-21 seq40208 109 6e-19 seq155405 100 3e-16 seq163152 98.7 1e-15 seq55815 98.7 1e-15 seq294161 89.7 6e-13 seq37689 89.7 6e-13 seq20182 89.7 6e-13 >seq16442 Length=1968 Score = 122 bits (134), Expect = 1e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || |||||||| |||| || ||||| || || ||||| Sbjct 407 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 348 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || ||||||||| ||| || || | | Sbjct 347 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 288 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | |||||| || || |||||||| || || || Sbjct 287 GTCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 228 Query 43172 AAAGATTTGCATTTTTACGCCG 43193 ||||| ||||| || |||||| Sbjct 227 GAAGATCTGCATCTTGACGCCG 206 >seq302619 Length=692 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||| ||||| | ||| |||||||||||| |||||||||||| Sbjct 556 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 497 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| ||||| || ||||||| ||||||||| | || Sbjct 496 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 437 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||| || ||| ||| | |||| | ||| | | | ||||| ||| || Sbjct 436 ATACCCTCTTTATCC-TGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC---TC 381 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 380 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || || | || || |||||||| ||||| || Sbjct 292 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAA 233 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| |||||||| | || | || ||||| || |||||| ||||| | Sbjct 232 ATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTG 173 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 172 TCGATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTA 116 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 115 ACGAAGATCTGCAT 102 >seq167275 Length=2206 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||||||||||||||| || |||||||| | || || |||||||||||||| || Sbjct 386 CTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAA 445 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| | Sbjct 446 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 504 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 505 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 561 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 562 TCACAAAGATCTGCAT 577 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||||||| ||||||||||| ||||| || || ||||| | |||| ||| Sbjct 825 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCT 884 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 885 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 944 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || ||| ||| | | | | || || ||| |||||| || | ||||| || Sbjct 945 ATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTC 1001 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || || ||||| ||||||||||||||| Sbjct 1002 TTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 1034 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||||||||| || |||||| || || |||||||| ||| Sbjct 579 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 638 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| || || || ||||| | ||||||||| | || Sbjct 639 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 698 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || || |||||| ||| | || | |||| | | | ||||| ||| ||| Sbjct 699 ATGCCTTCTTTGTCC-TGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---TTC 754 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || | || || ||||| || || | ||||| ||||||||||||||| Sbjct 755 CACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| ||| ||||| ||||||||||| || || || || | Sbjct 1046 ACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCC 1105 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| || || || || ||||| | |||||| || | || | || |||||| Sbjct 1106 ATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTT 1165 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | |||| |||| | | | ||||| |||| || || || | | Sbjct 1166 GTCC-TGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAATG 1221 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || || ||||| |||||||| ||||| Sbjct 1222 TGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 1261 >seq1583 Length=2309 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| |||| ||| ||||||||||||||| || || || || |||| | Sbjct 349 ACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCC 290 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| || || || | | ||||||||| | || | | |||||| Sbjct 289 ATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 230 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 ||| ||| |||| | ||| | | | | ||||| ||| |||||| || | | Sbjct 229 ATCC-TGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAG 174 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||||| || || ||||| |||||||||||||| Sbjct 173 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||| || ||||||| | | || || |||||||| |||||||| Sbjct 553 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAA 494 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || |||||| ||| ||| | || | ||| | Sbjct 493 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC-TGAATCTTGGCTTTCACAT 435 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||| || ||| || || || | || ||||| || || || || || | Sbjct 434 TGTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTT 378 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 377 TGACAAAGATCTGCAT 362 >seq40208 Length=2036 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || || || | |||||| || | || |||||| || ||||||||||| ||| Sbjct 825 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 766 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| |||| || | ||||||||| ||||| || | || |||||| || | || Sbjct 765 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGA 706 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||||||| ||| || |||| ||| | | | |||||| |||| || Sbjct 705 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TC 650 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| || || || || ||||| || ||||| ||||| Sbjct 649 AACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 599 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||| |||||| |||| || |||||||| || ||||| Sbjct 334 CTCCTTCTGGATGTTGTAGTCGGCCAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 275 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | | ||||||||| ||| || |||| ||| Sbjct 274 GATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 216 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || |||| ||||| || || || ||||| || | Sbjct 215 TGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTT 159 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 158 TCACGAAGATCTGCAT 143 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||| |||||| |||| || |||||||| || ||||| Sbjct 106 CTCCTTCTGGATGTTGTAGTCGGCCAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 47 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| | ||||||||||| || | || |||||||||| Sbjct 46 GATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 7 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | || |||||| || || ||||||||||||| |||| | Sbjct 586 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 527 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || | | |||||| || | || | | ||||| Sbjct 526 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCTT 467 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || |||| ||| | | | ||||| |||| || || |||| | Sbjct 466 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAG 411 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || ||||| || || || ||||| ||||| Sbjct 410 TGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 371 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || ||||||||||||||||| || || | || || Sbjct 1263 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCG 1204 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | | ||||||||| | || | | ||||| ||| | Sbjct 1203 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 1144 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGATGGTT 43151 || || ||||| | | | || || ||| ||||| || | |||||||| Sbjct 1143 ATCTTGGCTTTGACATTATCGATGGTATC---CGAACTCTCCACCTCCAAAGTGATGGTC 1087 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | ||||| |||||||| ||||| Sbjct 1086 TTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 1055 >seq155405 Length=1148 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| || ||||||||||| ||||| || || ||||| | |||| || Sbjct 203 ACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 262 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 263 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 322 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | || ||| |||||| || | ||||| || || Sbjct 323 ATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTC 382 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || ||||||||||||||||| |||||| Sbjct 383 CCAGTAAGCGTCTTTACAAAGATCTGCATT 412 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 43001 AATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCG 43060 ||| ||||| || || ||||| | |||| || | ||| ||||| || || ||||| | Sbjct 1 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 60 Query 43061 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGT 43120 |||||| || | || | | |||||||||| ||||||| |||| | | | || Sbjct 61 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGT 120 Query 43121 GTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTG 43180 ||| |||||| || | ||||| || || || || ||||||||||||||||| || Sbjct 121 ATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTG 180 Query 43181 CATT 43184 |||| Sbjct 181 CATT 184 >seq163152 Length=1956 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| |||||| || ||||||||||| |||| ||| || | Sbjct 1734 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 1793 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||| ||||| || | | ||||||||| | || | | |||||| Sbjct 1794 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 1853 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || |||| ||| | | | || || |||| || || |||| | Sbjct 1854 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAG 1909 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || ||||| || || || ||||| ||||| Sbjct 1910 TGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1949 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||||| || |||||| || ||||||||||| || ||||||| | || || Sbjct 1512 CACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 1571 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | |||||||||||||| || | | |||||| || | || | | ||||| ||| Sbjct 1572 CAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 1631 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 ||| || |||| | | | |||||| |||| || || |||| ||||| || Sbjct 1632 GATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTC---TCAACTTCGAGAGTGATTGT 1688 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || ||||| || ||||||||||| Sbjct 1689 CTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 1721 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| |||||||||||||| || || |||| || Sbjct 1285 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 1344 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | | |||||||| | || | | |||||| ||| | Sbjct 1345 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGG 1404 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || || ||||| | | | || || |||| || || || | |||||||| Sbjct 1405 ATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTC 1461 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| ||||| || ||||| Sbjct 1462 TTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 1493 >seq55815 Length=911 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| || |||| ||| ||||||||||||||| || ||| | || |||| | Sbjct 349 ACGAAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACAAGTGTCCTTCC 290 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || || | | || ||||| | || | | |||||| Sbjct 289 ATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTT 230 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 ||| ||| |||| | ||| | | | | ||||| ||| |||||| || || Sbjct 229 GTCT-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAA 174 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||||| || || ||||| |||||||||||||| Sbjct 173 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134 >seq294161 Length=603 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||||||||| || |||||| || || |||||||||||||| || || | || || Sbjct 216 ACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCAGCCAGGGTACGACCATCCTCG 157 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | | ||||||||| | || | | ||||||||| | Sbjct 156 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 97 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 || || |||| ||| | | | || || |||| || || |||| ||||| || Sbjct 96 ATCTTGGCCTTGA-CGTTGTCGATGGTATCAGAGCTC---TCGACCTCGAGAGTGATCGT 41 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || || || ||||| ||||| Sbjct 40 CTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 8 >seq37689 Length=540 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||| | || || | | || || |||||||||||||| || Sbjct 185 TCCTTTTGAATATTGTAGTCAACAAGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAA 244 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | || ||||| | || | || |||||||| |||||| ||||| | Sbjct 245 ATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTA 304 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 305 TCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTG 361 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 362 ACGAAGATCTGCAT 375 >seq20182 Length=796 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | || |||||| || || ||||||||||| ||||| || | Sbjct 613 ACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCGGCC 672 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || ||||||||||| | || | | |||||| Sbjct 673 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 732 Query 43088 GTCC 43091 |||| Sbjct 733 GTCC 736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569507721361640