Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq314856 104 3e-17
>seq314856
Length=966
Score = 104 bits (114), Expect = 3e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472
|| |||| ||| |||||||| | || | || || | |||| |||||| || ||| ||
Sbjct 65 CCTTTTGCCTCCCCCCTGATCAACATAACGGGCAGTATCATTAAAAACTCGCAGCATAGG 124
Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532
||| || || || ||| | ||||| || || ||||| | ||| |||||||||| ||
Sbjct 125 AATGATGCCATTGGATGTCCCATTTGTTCCACGAATATAACTGCCAGTGGCACGAATGTT 184
Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592
|| || | ||| |||||||| || ||| ||| | || ||| || || ||
Sbjct 185 GTGAACAGAGACACCAATTCCCCCAGCTGATTTGCTGATGACAGCACATTCCTTCAAAGT 244
Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63644
||||| |||||||| ||||||||||| ||||| | || || ||||||
Sbjct 245 ATCATATATGCCTTCAATGCTATCATCTTTCATGCATACAAGGAAGCAGCTA 296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627273428186640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |