Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq314856 120 4e-22
>seq314856
Length=966
Score = 120 bits (132), Expect = 4e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147
|||| ||| |||||||| | || | || || | |||| |||||| || ||| |||||
Sbjct 68 TTTGCCTCCCCCCTGATCAACATAACGGGCAGTATCATTAAAAACTCGCAGCATAGGAAT 127
Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207
|| ||||||||||| ||||| || || ||||| || ||| |||||||||| ||
Sbjct 128 GATGCCATTGGATGTCCCATTTGTTCCACGAATATAACTGCCAGTGGCACGAATGTTGTG 187
Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267
|| || | ||| |||||||| || ||| ||| | || ||| || || |||||
Sbjct 188 AACAGAGACACCAATTCCCCCAGCTGATTTGCTGATGACAGCACATTCCTTCAAAGTATC 247
Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316
||| ||||| || ||||||||||| ||||| | || || ||||||
Sbjct 248 ATATATGCCTTCAATGCTATCATCTTTCATGCATACAAGGAAGCAGCTA 296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715367326247320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |