Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq163152 89.7 3e-13
>seq163152
Length=1956
Score = 89.7 bits (98), Expect = 3e-13
Identities = 153/217 (71%), Gaps = 14/217 (6%)
Strand=Plus/Plus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT--TG--GT 33215
||||||||||| |||||||| || || ||||||||||| | ||| |||| || |
Sbjct 1512 CACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCG-CAA---GAGTCCTGCCAT 1567
Query 33216 CATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTT 33275
| ||||||||||| ||| || || || | ||||| |||| || || ||||| || |
Sbjct 1568 CCTCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTAT 1627
Query 33276 C---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTA 33332
| | | | ||| || || | | |||||||||| | | ||| || ||||| |
Sbjct 1628 CCTGGATCTTGGCC---TTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGA 1684
Query 33333 TCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || || || ||||| || ||||| ||||||||
Sbjct 1685 TTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 1721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317522078782374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |