Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq167275 154 3e-32
seq23575 140 7e-28
seq1583 136 9e-27
seq302619 129 1e-24
seq155405 123 6e-23
seq136929 122 2e-22
seq40208 122 2e-22
seq20182 118 2e-21
seq37689 116 8e-21
seq173346 113 1e-19
seq167078 102 2e-16
seq21874 102 2e-16
seq55815 98.7 2e-15
seq104817 93.3 1e-13
seq194843 91.5 3e-13
>seq167275
Length=2206
Score = 154 bits (170), Expect = 3e-32
Identities = 159/207 (77%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| ||||| || ||||| || ||||| | |||||||| ||||| |||| |||
Sbjct 831 TGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCTAACTGT 890
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || ||||| || |||||||| ||||| || || || || || || ||||| ||||||
Sbjct 891 TTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTT 950
Query 104477 GCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533
||||| ||||| || | ||||| ||| ||| ||||| | ||| || ||||| |||
Sbjct 951 GCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTCTTCCCA 1007
Query 104534 GTAAGTGTTTTTACAAATATCTGCATT 104560
||||| || || ||||| || ||||||
Sbjct 1008 GTAAGGGTCTTCACAAAGATTTGCATT 1034
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || || |||||||| || || | |||||| | || ||
Sbjct 365 AAGGACGAGGTGAAGGGTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATC 424
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || || |||||||| || |||||||| || || ||||| || || || || ||
Sbjct 425 TTCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 484
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||||||||| ||||| || | ||||| | |||||||| | || || ||
Sbjct 485 CTGAATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGT 544
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || || ||||| ||||||||
Sbjct 545 CTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 577
Score = 116 bits (128), Expect = 8e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || || || | || || ||||| || ||||| || ||
Sbjct 1032 ATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCT 1091
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct 1092 GCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGG 1151
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || |||||||||||||| || ||||| || | || || || | ||
Sbjct 1152 GGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTC-AGAGCTCTC 1210
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||| || ||||| || || || || || ||||| ||||||||
Sbjct 1211 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 1261
Score = 107 bits (118), Expect = 4e-18
Identities = 165/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || | ||| | || || || ||||| || || || ||
Sbjct 576 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCT 635
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || ||||| || || || || ||||| ||||| || |||||||| || || ||
Sbjct 636 GCCAGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 695
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || |||||||| ||||||||||| || || ||||| || | || || ||| |
Sbjct 696 GGAATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---T 752
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || | |||||||| || || || | || || ||||| || ||||||
Sbjct 753 TCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806
>seq23575
Length=1941
Score = 140 bits (154), Expect = 7e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || || || | || || || ||||| ||||| ||||||| || || |
Sbjct 1608 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGG 1549
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || ||||| ||||| || |||||||||||||| ||||| || || ||
Sbjct 1548 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 1489
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| ||||| || || || | ||| ||| || | || ||||| || ||
Sbjct 1488 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGGGT 1430
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| ||||| || ||||| || || ||||| ||||||||
Sbjct 1429 GACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGCAT 1391
>seq1583
Length=2309
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || |||||||| || || || | ||||| || || ||
Sbjct 574 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 515
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || |||||||| || || |||||||| || || || || || || || |||||
Sbjct 514 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 455
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| ||||| ||||| || | ||||| | |||||||| | ||| || ||
Sbjct 454 CTGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGT 395
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| ||||| ||||||||
Sbjct 394 CTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 362
Score = 114 bits (126), Expect = 3e-20
Identities = 146/200 (73%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||||||||| | || || || || || || || || || ||
Sbjct 330 GTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCT 271
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || || || || || || || ||||||||||| || |||||
Sbjct 270 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATTTTAGCTTTC 211
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| |||| ||| || ||| ||| || || | || || || || || |||||
Sbjct 210 ACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGGTTTTGCCGGTAAGG 154
Query 104540 GTTTTTACAAATATCTGCAT 104559
|| || ||||| || |||||
Sbjct 153 GTCTTGACAAAGATTTGCAT 134
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||||||||| ||||| | ||||| ||| || ||||| ||||| ||
Sbjct 102 GTTGATTCCTTCTGAATATTGTAGTCCGCAAGAGTGTGACCATCCTCTAGCTGTTTCCCT 43
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463
|||||||| |||||||| || || ||||| || || || ||
Sbjct 42 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 2
>seq302619
Length=692
Score = 129 bits (142), Expect = 1e-24
Identities = 162/221 (73%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || || |||| || ||||| || |||||||| ||||||| || || |
Sbjct 319 AGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGT 260
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || |||||||||||||| || || || || || || || || |||||
Sbjct 259 CCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCC 200
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
||||| || || || ||||| ||||| || | ||| || ||| ||| ||||| ||
Sbjct 199 TTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGG 143
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| ||||| || || || || || ||||||||
Sbjct 142 GTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 102
Score = 113 bits (124), Expect = 1e-19
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | ||| |||| ||| | || || || || ||||| || || |||
Sbjct 559 ATGCCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 500
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || || |||||||| || || ||||| || || ||
Sbjct 499 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 440
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || |||||||||||||||||||| || || || || | ||| || | ||
Sbjct 439 GGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCA 380
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || || || ||||| || || || ||||| || |||||
Sbjct 379 ACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484
|||||| |||||||| || || ||||| || || || || |||||||||||||| || ||
Sbjct 692 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 633
Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544
||| || | ||||| | ||| ||||| | || || ||||| || || || || ||
Sbjct 632 ATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTT 573
Query 104545 TACAAATATCTGCAT 104559
||||| || |||||
Sbjct 572 GACAAAGATTTGCAT 558
>seq155405
Length=1148
Score = 123 bits (136), Expect = 6e-23
Identities = 148/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||| || || || ||||||| || || | ||||| || || || || |||
Sbjct 671 GTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 730
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || ||||| ||||| || || || ||||| || || || || |||||||||||
Sbjct 731 GCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 790
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | || || ||| ||| ||||| || || || ||||| || || ||
Sbjct 791 ACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGG 847
Query 104540 GTTTTTACAAATATCTGCAT 104559
||||| ||||| ||||||||
Sbjct 848 GTTTTCACAAAGATCTGCAT 867
>seq136929
Length=1332
Score = 122 bits (134), Expect = 2e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || || || | || || || ||||| ||||| ||||| | || || ||
Sbjct 334 AGTCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTG 275
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || ||||| ||||| || |||||||||||||| ||||| || || ||
Sbjct 274 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 215
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| ||||| || || || | ||| ||| || | || || | || ||
Sbjct 214 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCGACATAGAGGGT 156
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| ||||| || || || || || ||||| ||||||||
Sbjct 155 GACGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 117
>seq40208
Length=2036
Score = 122 bits (134), Expect = 2e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || | || | || || || ||||| ||||| || || | ||||| ||
Sbjct 1044 AGCCTGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG 985
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || | ||| |||||||| || || | |||||| ||||| || || || |||||
Sbjct 984 CCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCC 925
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|||||||| ||||| || || || || || | |||||| || | || ||||| || ||
Sbjct 924 TTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGG-AGCTCTCAACCTCCAGGGT 866
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || | || || || |||||||||||
Sbjct 865 AATGGTCTTCCCTGTCAAAGTCTTCACGAATATCTGCAT 827
>seq20182
Length=796
Score = 118 bits (130), Expect = 2e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | ||||| || ||||| ||||| ||||| | ||| || | || ||
Sbjct 388 AAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATC 447
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || ||||| || |||||||| || || || || || ||||| || ||
Sbjct 448 CTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 507
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||||||||| || || || || || | ||| || || | || ||||| || || || |
Sbjct 508 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACCTCAAGGGTGATGG 566
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| ||||| | || || ||||| ||||||||
Sbjct 567 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 600
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || ||||| ||||| || || || || | || || | || ||
Sbjct 160 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATC 219
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || ||||| ||||| || |||||||| || || || || || || || || ||
Sbjct 220 CTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 279
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || ||||| || | ||| || || || ||||| || || || ||
Sbjct 280 CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 339
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || | || || || || ||||||||
Sbjct 340 CTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 372
Score = 93.3 bits (102), Expect = 1e-13
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || || || ||||| || || || |||| ||||||| || ||
Sbjct 616 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCGGCCATC 675
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || |||||||| || || | ||| || || || || ||||| || || ||
Sbjct 676 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 735
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || || || || | ||| || || || ||||| || || |||||
Sbjct 736 CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 795
Query 104527 C 104527
|
Sbjct 796 C 796
>seq37689
Length=540
Score = 116 bits (128), Expect = 8e-21
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || || || | || ||||| || |||||||| |||||| || ||
Sbjct 158 AGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACAAGGGTGTGT 217
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || ||||||||||| ||||| ||||| || || || || |||||
Sbjct 218 CCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCC 277
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
|| || || || || ||||| ||||| || | ||| || ||| ||| ||||| ||
Sbjct 278 TTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCAACCTCAAGG 334
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| ||||| || || || || || ||||||||
Sbjct 335 GTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 375
>seq173346
Length=301
Score = 113 bits (124), Expect = 1e-19
Identities = 140/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || || || | || || || ||||| ||||| ||||| | || || |
Sbjct 189 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGG 130
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 129 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 70
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| ||||| || || || | ||| ||| || | |||||||| || ||
Sbjct 69 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCTACCTCGAGGGT 11
Query 104521 AATAGTCTT 104529
|| |||||
Sbjct 10 GATGGTCTT 2
>seq167078
Length=762
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || | ||| | || || || | || || ||||| ||||||||||| || |
Sbjct 637 TTCCTCCCCTCAACCTCAAAACAAGGTGGAGAGTTGACTCTTTTTGAATATTATAATCTG 578
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| |||| ||| ||||| | || || ||||||||||| || ||||| ||||| ||||
Sbjct 577 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAG 518
Query 104451 GTATTCCTTCTTTATCCTGAA 104471
| || ||||| ||||||||||
Sbjct 517 GGATGCCTTCCTTATCCTGAA 497
>seq21874
Length=1446
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| | ||||| || | || || || || || || || || || |
Sbjct 1264 TTCCACCCCTCAGCCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 1323
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|||||||| || ||||| | ||| || || |||||||| | ||||||||||||||||
Sbjct 1324 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 1383
Query 104451 GTATTCCTTCTTTATCCTGAA 104471
| || ||||| ||||||||||
Sbjct 1384 GGATGCCTTCCTTATCCTGAA 1404
>seq55815
Length=911
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| |||| || | || || || || ||||||||||||||| || || || || ||
Sbjct 346 AAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACAAGTGTCCTTCCATC 287
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || |||||||| | ||| ||||| || || || || || || || ||
Sbjct 286 CTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTTGTC 227
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523
||||| || ||||| ||||| || | ||| || ||| ||| || || | | ||
Sbjct 226 TTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAATGAT 170
Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||||| || || ||||| || |||||
Sbjct 169 GGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || || || ||||| || || || || || || | |||||| ||
Sbjct 550 TCCTTCTGAATGTTGTAATCTATAAGAGTCCTCCCATCCTCAAGCTGCTGTCCAGCGAAT 491
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| ||||| || || || |||| || | || || ||||||||||| ||||| |||||
Sbjct 490 ATGAGCCTTTGCTGGTCCAGAGGGATGC--TCCTTGTCCTGAATCTTAGCTTTCACATTG 433
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| | |||||||| | ||| || ||||| | || | ||||| |||
Sbjct 432 TCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCTTGTCAACGTTTTGACA 373
Query 104549 AATATCTGCAT 104559
| || |||||
Sbjct 372 ATGATTTGCAT 362
>seq104817
Length=483
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || | ||| | || || || | || || ||||| || |||||||| || |
Sbjct 358 TTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTG 299
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| |||| ||| ||||| | || || ||||||||||| || ||||| ||||| ||||
Sbjct 298 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAG 239
Query 104451 GTATTCCTTCTTTATCCTGAA 104471
| || ||||| || |||||||
Sbjct 238 GGATGCCTTCCTTGTCCTGAA 218
>seq194843
Length=321
Score = 91.5 bits (100), Expect = 3e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || || || ||||| ||||| ||||||| ||| || | || ||
Sbjct 144 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCTAGGGTGCGGCCATC 203
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || ||||| || |||||||| || || || || || ||||| || ||
Sbjct 204 CTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATGCCTTCCTTGTC 263
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499
||||||||| || || || || || | ||| ||
Sbjct 264 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC 296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146631005060404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |