Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq167275 154 3e-32 seq23575 140 7e-28 seq1583 136 9e-27 seq302619 129 1e-24 seq155405 123 6e-23 seq136929 122 2e-22 seq40208 122 2e-22 seq20182 118 2e-21 seq37689 116 8e-21 seq173346 113 1e-19 seq167078 102 2e-16 seq21874 102 2e-16 seq55815 98.7 2e-15 seq104817 93.3 1e-13 seq194843 91.5 3e-13 >seq167275 Length=2206 Score = 154 bits (170), Expect = 3e-32 Identities = 159/207 (77%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| ||||| || ||||| || ||||| | |||||||| ||||| |||| ||| Sbjct 831 TGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCTAACTGT 890 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || ||||| || |||||||| ||||| || || || || || || ||||| |||||| Sbjct 891 TTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTT 950 Query 104477 GCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||||| ||||| || | ||||| ||| ||| ||||| | ||| || ||||| ||| Sbjct 951 GCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTCTTCCCA 1007 Query 104534 GTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || || ||||| || |||||| Sbjct 1008 GTAAGGGTCTTCACAAAGATTTGCATT 1034 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || || |||||||| || || | |||||| | || || Sbjct 365 AAGGACGAGGTGAAGGGTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATC 424 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || |||||||| || |||||||| || || ||||| || || || || || Sbjct 425 TTCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 484 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||| ||||| || | ||||| | |||||||| | || || || Sbjct 485 CTGAATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGT 544 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || ||||| |||||||| Sbjct 545 CTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 577 Score = 116 bits (128), Expect = 8e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || || || | || || ||||| || ||||| || || Sbjct 1032 ATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCT 1091 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 1092 GCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGG 1151 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || |||||||||||||| || ||||| || | || || || | || Sbjct 1152 GGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTC-AGAGCTCTC 1210 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||| || ||||| || || || || || ||||| |||||||| Sbjct 1211 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 1261 Score = 107 bits (118), Expect = 4e-18 Identities = 165/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || | ||| | || || || ||||| || || || || Sbjct 576 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCT 635 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || ||||| || || || || ||||| ||||| || |||||||| || || || Sbjct 636 GCCAGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 695 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || |||||||| ||||||||||| || || ||||| || | || || ||| | Sbjct 696 GGAATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---T 752 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | |||||||| || || || | || || ||||| || |||||| Sbjct 753 TCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806 >seq23575 Length=1941 Score = 140 bits (154), Expect = 7e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||||| || || | Sbjct 1608 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGG 1549 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || |||||||||||||| ||||| || || || Sbjct 1548 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 1489 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | || ||||| || || Sbjct 1488 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGGGT 1430 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || ||||| || || ||||| |||||||| Sbjct 1429 GACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGCAT 1391 >seq1583 Length=2309 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || || || | ||||| || || || Sbjct 574 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 515 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| || || |||||||| || || || || || || || ||||| Sbjct 514 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 455 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| ||||| ||||| || | ||||| | |||||||| | ||| || || Sbjct 454 CTGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGT 395 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| ||||| |||||||| Sbjct 394 CTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 362 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||||||||| | || || || || || || || || || || Sbjct 330 GTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCT 271 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || || || || || || ||||||||||| || ||||| Sbjct 270 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATTTTAGCTTTC 211 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| |||| ||| || ||| ||| || || | || || || || || ||||| Sbjct 210 ACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGGTTTTGCCGGTAAGG 154 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| Sbjct 153 GTCTTGACAAAGATTTGCAT 134 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| ||||| | ||||| ||| || ||||| ||||| || Sbjct 102 GTTGATTCCTTCTGAATATTGTAGTCCGCAAGAGTGTGACCATCCTCTAGCTGTTTCCCT 43 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463 |||||||| |||||||| || || ||||| || || || || Sbjct 42 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 2 >seq302619 Length=692 Score = 129 bits (142), Expect = 1e-24 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || |||| || ||||| || |||||||| ||||||| || || | Sbjct 319 AGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGT 260 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || |||||||||||||| || || || || || || || || ||||| Sbjct 259 CCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCC 200 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 ||||| || || || ||||| ||||| || | ||| || ||| ||| ||||| || Sbjct 199 TTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGG 143 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || || || |||||||| Sbjct 142 GTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 102 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| |||| ||| | || || || || ||||| || || ||| Sbjct 559 ATGCCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 500 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || |||||||| || || ||||| || || || Sbjct 499 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 440 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||||||||| || || || || | ||| || | || Sbjct 439 GGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCA 380 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || || || ||||| || || || ||||| || ||||| Sbjct 379 ACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 |||||| |||||||| || || ||||| || || || || |||||||||||||| || || Sbjct 692 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 633 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||| || | ||||| | ||| ||||| | || || ||||| || || || || || Sbjct 632 ATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTT 573 Query 104545 TACAAATATCTGCAT 104559 ||||| || ||||| Sbjct 572 GACAAAGATTTGCAT 558 >seq155405 Length=1148 Score = 123 bits (136), Expect = 6e-23 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || || || ||||||| || || | ||||| || || || || ||| Sbjct 671 GTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 730 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| ||||| || || || ||||| || || || || ||||||||||| Sbjct 731 GCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 790 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| || || || ||||| || || || Sbjct 791 ACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGG 847 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 848 GTTTTCACAAAGATCTGCAT 867 >seq136929 Length=1332 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || || | || || || ||||| ||||| ||||| | || || || Sbjct 334 AGTCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTG 275 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || |||||||||||||| ||||| || || || Sbjct 274 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 215 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | || || | || || Sbjct 214 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCGACATAGAGGGT 156 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || || || ||||| |||||||| Sbjct 155 GACGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 117 >seq40208 Length=2036 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || || || ||||| ||||| || || | ||||| || Sbjct 1044 AGCCTGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG 985 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || | ||| |||||||| || || | |||||| ||||| || || || ||||| Sbjct 984 CCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCC 925 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 |||||||| ||||| || || || || || | |||||| || | || ||||| || || Sbjct 924 TTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGG-AGCTCTCAACCTCCAGGGT 866 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || | || || || ||||||||||| Sbjct 865 AATGGTCTTCCCTGTCAAAGTCTTCACGAATATCTGCAT 827 >seq20182 Length=796 Score = 118 bits (130), Expect = 2e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||||| || ||||| ||||| ||||| | ||| || | || || Sbjct 388 AAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATC 447 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || ||||| || |||||||| || || || || || ||||| || || Sbjct 448 CTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 507 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||| || || || || || | ||| || || | || ||||| || || || | Sbjct 508 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACCTCAAGGGTGATGG 566 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 567 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 600 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || ||||| ||||| || || || || | || || | || || Sbjct 160 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATC 219 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||| ||||| || |||||||| || || || || || || || || || Sbjct 220 CTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 279 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| || | ||| || || || ||||| || || || || Sbjct 280 CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 339 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | || || || || |||||||| Sbjct 340 CTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 372 Score = 93.3 bits (102), Expect = 1e-13 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| || || || |||| ||||||| || || Sbjct 616 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCGGCCATC 675 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || || | ||| || || || || ||||| || || || Sbjct 676 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 735 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || || || || | ||| || || || ||||| || || ||||| Sbjct 736 CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 795 Query 104527 C 104527 | Sbjct 796 C 796 >seq37689 Length=540 Score = 116 bits (128), Expect = 8e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || || | || ||||| || |||||||| |||||| || || Sbjct 158 AGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACAAGGGTGTGT 217 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || ||||||||||| ||||| ||||| || || || || ||||| Sbjct 218 CCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCC 277 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || || || || || ||||| ||||| || | ||| || ||| ||| ||||| || Sbjct 278 TTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCAACCTCAAGG 334 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || || || |||||||| Sbjct 335 GTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 375 >seq173346 Length=301 Score = 113 bits (124), Expect = 1e-19 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||| | || || | Sbjct 189 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGG 130 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 129 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 70 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | |||||||| || || Sbjct 69 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCTACCTCGAGGGT 11 Query 104521 AATAGTCTT 104529 || ||||| Sbjct 10 GATGGTCTT 2 >seq167078 Length=762 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || | ||| | || || || | || || ||||| ||||||||||| || | Sbjct 637 TTCCTCCCCTCAACCTCAAAACAAGGTGGAGAGTTGACTCTTTTTGAATATTATAATCTG 578 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || |||| ||| ||||| | || || ||||||||||| || ||||| ||||| |||| Sbjct 577 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAG 518 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| |||||||||| Sbjct 517 GGATGCCTTCCTTATCCTGAA 497 >seq21874 Length=1446 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | ||||| || | || || || || || || || || || | Sbjct 1264 TTCCACCCCTCAGCCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 1323 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || ||||| | ||| || || |||||||| | |||||||||||||||| Sbjct 1324 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 1383 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| |||||||||| Sbjct 1384 GGATGCCTTCCTTATCCTGAA 1404 >seq55815 Length=911 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| || | || || || || ||||||||||||||| || || || || || Sbjct 346 AAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACAAGTGTCCTTCCATC 287 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || |||||||| | ||| ||||| || || || || || || || || Sbjct 286 CTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTTGTC 227 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 ||||| || ||||| ||||| || | ||| || ||| ||| || || | | || Sbjct 226 TTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAATGAT 170 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || || ||||| || ||||| Sbjct 169 GGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || || || ||||| || || || || || || | |||||| || Sbjct 550 TCCTTCTGAATGTTGTAATCTATAAGAGTCCTCCCATCCTCAAGCTGCTGTCCAGCGAAT 491 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || ||||| || || || |||| || | || || ||||||||||| ||||| ||||| Sbjct 490 ATGAGCCTTTGCTGGTCCAGAGGGATGC--TCCTTGTCCTGAATCTTAGCTTTCACATTG 433 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| | |||||||| | ||| || ||||| | || | ||||| ||| Sbjct 432 TCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCTTGTCAACGTTTTGACA 373 Query 104549 AATATCTGCAT 104559 | || ||||| Sbjct 372 ATGATTTGCAT 362 >seq104817 Length=483 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || | ||| | || || || | || || ||||| || |||||||| || | Sbjct 358 TTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTG 299 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || |||| ||| ||||| | || || ||||||||||| || ||||| ||||| |||| Sbjct 298 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAG 239 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| || ||||||| Sbjct 238 GGATGCCTTCCTTGTCCTGAA 218 >seq194843 Length=321 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| ||||| ||||||| ||| || | || || Sbjct 144 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCTAGGGTGCGGCCATC 203 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || ||||| || |||||||| || || || || || ||||| || || Sbjct 204 CTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATGCCTTCCTTGTC 263 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499 ||||||||| || || || || || | ||| || Sbjct 264 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146631005060404