Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq314856 86.0 2e-11
>seq314856
Length=966
Score = 86.0 bits (94), Expect = 2e-11
Identities = 163/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| ||| || ||||| || ||| ||| || || || | ||| || | ||| |
Sbjct 292 TGCTTCCTTGTATGCATGAAAGATGATAGCATTGAAGGCATATATGATACTTTGAAGGAA 233
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725
|||||| | || ||| || || ||||||||||| || | ||||| |||||| |
Sbjct 232 TGTGCTGTCATCAGCAAATCAGCTGGGGGAATTGGTGTCTCTGTTCACAACATTCGTGCC 173
Query 363726 ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | |||||| ||||| || || | |||| | || ||||| | |||| ||||| |
Sbjct 172 ACTG-GCAGTTATATTCGTGGAACAAATGGGACA-TCCAATGGCATCATTCCTATGCTGC 115
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839
| || ||| | ||||||| | || || || ||||| ||||| || | |||||
Sbjct 114 GAGTTTTTAATGATACTGCCCGTTATGTTGATCAGGGGGGAGGCAAAAGGAAAGG 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1297957030613466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |