Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq20182 134 1e-26
seq155405 131 1e-25
seq55815 127 2e-24
seq167275 122 7e-23
seq163152 118 9e-22
seq302619 116 3e-21
seq23575 116 3e-21
seq136929 114 1e-20
seq16442 109 5e-19
seq1583 109 5e-19
seq41891 102 7e-17
seq33539 100 2e-16
seq294161 98.7 8e-16
seq40208 98.7 8e-16
seq312774 82.4 6e-11
>seq20182
Length=796
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || |||| ||||| ||||| | |
Sbjct 372 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT 313
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || ||||| |||||||||||||| ||||| || ||
Sbjct 312 GACACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 253
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| |||||||| || ||| | |||||| ||||||| | | |||||||||
Sbjct 252 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACAAC 193
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || ||||||||| | ||||| ||
Sbjct 192 ATCCAGAAGGAATCCACCCTTCATTTGGT 164
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315
|||| ||||| ||||| | | || ||| | ||| | | || || ||||| ||||
Sbjct 791 TCACCCTTGAGGTGGAGTCTTCTGACACCATTGACAACGTTAAGGCCAAGATTCAGGACA 732
Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375
||||||| ||||| || || || || ||||| || ||||| ||||| ||| | ||||||
Sbjct 731 AGGAGGGAATTCCCCCGGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATG 672
Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGAT 22435
||| || | | ||||||||||| || || || || ||| | ||||| || | ||
Sbjct 671 GCCGAACTCTTGCTGATTACAACATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTC 612
Query 22436 TGCGCGGAGGT 22446
|||| || |||
Sbjct 611 TGCGTGGTGGT 601
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| || || ||||| || || |||| | || ||||| | | |
Sbjct 144 ATGCAGATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTGGAGAGCTCA 85
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || || |||||||||||||| ||||| || ||
Sbjct 84 GACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 25
Query 22339 CAACGTCTTATATTTGCCGGCAA 22361
|| | ||||| |||||||| ||
Sbjct 24 CAGAGGCTTATCTTTGCCGGAAA 2
>seq155405
Length=1148
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| ||||| | || || || || |||| ||||| || |||| |
Sbjct 869 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCT 810
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || ||||| ||| || |||||||||||||| ||||| || || |
Sbjct 809 CTGACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACC 750
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
||||| | || || ||||| ||||| ||| | ||||| || || || | || ||||
Sbjct 749 AACAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGACTACA 690
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428
|||| |||||||| ||||| | || || |||
Sbjct 689 ACATCCAAAAAGAGTCCACTCTCCACTTGGTT 658
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| || || ||||||| | ||
Sbjct 411 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCCTGGAGGTGGAAAGCTCC 352
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| || || || ||||||||||||||||| || |||||
Sbjct 351 GATACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 292
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || |||||||| ||||| | || | | || ||||||
Sbjct 291 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 232
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| ||||| ||| | || || ||| | ||| |||| || ||
Sbjct 231 ATTCAAAAGGAATCAACCTTGCACTTGGTTCTCCGACTGCGTGGTGG 185
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||| | || || || || |||| | || || || | |
Sbjct 639 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGTTCT 580
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || |||| ||| || || ||||||||||| || || || |||||
Sbjct 579 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 520
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||||||||||||| |||||||| ||||||| | ||||||||||
Sbjct 519 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 460
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||| || || ||
Sbjct 459 ATCCAAAAGGAGTCTAC 443
Score = 100 bits (110), Expect = 2e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| | || ||||||| | ||
Sbjct 183 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTCC 124
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| |||||| || |||||||||||||| || || |||||
Sbjct 123 GATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCAG 64
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373
|| | || || ||||| || |||||||| |||||
Sbjct 63 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGA 29
>seq55815
Length=911
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | ||||| ||||| ||| | | |||||||||| | |
Sbjct 134 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCATTGTGGAAGTGGAAAGCTCT 193
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| |||||||||||||||||||||||||| || || |||
Sbjct 194 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAA 253
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| ||||| ||| | |||||| | || | || || ||
Sbjct 254 CAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGTTGACTATAAT 313
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || ||||| | || ||||||| |||
Sbjct 314 ATTCAAAAGGAGTCCACTCTGCACTTAGTGCTTCGTCTGCGCGGTGGT 361
>seq167275
Length=2206
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || || |||| | || ||||||| | |
Sbjct 1033 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACAATCACATTGGAGGTGGAAAGCTCT 974
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | ||| ||| || || ||||||||||||||||| || |||||
Sbjct 973 GATACAATTGACAATGTTAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 914
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || |||||||||||||| | || | | || ||||||
Sbjct 913 CAGAGGCTCATCTTTGCAGGTAAACAGTTAGAGGACGGAAGAACTCTTGCAGACTACAAC 854
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| ||||| || | || || ||| | || |||| || ||
Sbjct 853 ATTCAAAAGGAATCAACATTGCACTTGGTTCTCCGTCTGCGTGGTGG 807
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| | || || || | | |
Sbjct 1261 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 1202
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| ||| ||||| ||||||||||| || || || |||||
Sbjct 1201 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 1142
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||||||||||||| |||||||| ||| || || | ||||||||
Sbjct 1141 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTACAAT 1082
Query 22399 ATTCAAAAAGAATCCACC 22416
|| |||||||| ||||||
Sbjct 1081 ATCCAAAAAGAGTCCACC 1064
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| ||||| | || || || || |||| || || || |||| |
Sbjct 1491 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCT 1432
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || |||| ||| || |||||||||||||| || || || || |
Sbjct 1431 CTGACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACC 1372
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| ||| | || || ||||| ||||| ||| | ||||| ||| || | | || ||||
Sbjct 1371 AGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACA 1312
Query 22397 ACATTCAAAAAGAATCCACC 22416
||||||||||||| ||||||
Sbjct 1311 ACATTCAAAAAGAGTCCACC 1292
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||||| || || ||||| | ||| | |||||||||| | |
Sbjct 805 ATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTCA 746
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| || ||||| ||||| || || ||||| || || ||
Sbjct 745 GACACAATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 686
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| | || | | |||||||||
Sbjct 685 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATTACAAC 626
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || || | ||||| ||
Sbjct 625 ATACAGAAGGAGTCAACTCTGCATTTGGT 597
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || ||||| || || | || || || || | || | || || || | |
Sbjct 578 GATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATAACCTTGGAGGTAGAGAGTTC 519
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | ||| ||| ||||| ||||||||||| ||||| || || ||
Sbjct 518 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 459
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || |||||||| || || ||| | || ||| ||| || | | ||||||||
Sbjct 458 GCAGAGGCTCATATTTGCTGGTAAGCAGCTTGAAGATGGCCGGACTCTAGCAGATTACAA 399
Query 22398 CATTCAAAAAGAATCCACC 22416
|||||||| || || |||
Sbjct 398 TATTCAAAAGGAGTCAACC 380
>seq163152
Length=1956
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| |||||||| || ||||| || || || || ||||| | || || || | | |
Sbjct 1494 GATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTC 1435
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || ||||| || || || || |||||||| || ||||| || ||
Sbjct 1434 GGATACCATTGATAATGTCAAAGCCAAGATCCAGGATAAGGAGGGGATCCCACCGGACCA 1375
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | | || ||||||||||| ||| | ||||| || ||| | | ||||||||
Sbjct 1374 GCAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTACAA 1315
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||| || || |||||| | || || ||
Sbjct 1314 CATTCAGAAGGAGTCCACCCTTCACTTGGT 1285
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| ||||||| || ||| ||||||| || || || | | |
Sbjct 1949 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 1890
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || || || ||||||||||| ||||| || || ||
Sbjct 1889 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 1830
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||||| |||||| ||| || | ||||||||||
Sbjct 1829 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAAT 1770
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | ||||| || | || | ||||| |||
Sbjct 1769 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTTCGCGGTGGT 1722
>seq302619
Length=692
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || ||||| | || | || || || | |
Sbjct 330 ATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTCT 389
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || ||| ||||| || || |||||||| ||||| || ||
Sbjct 390 GACACCATTGACAACGTGAAGGCAAAGATTCAGGATAAAGAGGGTATCCCACCAGACCAG 449
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| ||||||| | | |||||||||
Sbjct 450 CAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAAC 509
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| || |||||| | ||||||||
Sbjct 510 ATTCAAAAGGAGTCCACCCTTCATTTAGT 538
>seq23575
Length=1941
Score = 116 bits (128), Expect = 3e-21
Identities = 146/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || ||||| || || || || |||| || || ||||| | | ||
Sbjct 1619 ATGCAGATTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTGGAGGTGGAGAGCTCC 1678
Query 22279 GATACCGTGGACGATATCAAA-CAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | ||| || ||||| | || ||||||| ||||||||||| || || |||||
Sbjct 1679 GATACCATTGACAATGTCAAAGCCAAGGTTTCAAGATAAGGAGGGTATCCCGCCGGATCA 1738
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | | || || ||||| || ||||| |||||| || || | ||||||| ||
Sbjct 1739 GCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAA 1798
Query 22398 CATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 1799 TATCCAGAAGGAGTCTACC 1817
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || ||||| || || ||||| | | ||
Sbjct 1391 ATGCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTCC 1450
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | ||||| || || || ||||||||||| || || || ||||||
Sbjct 1451 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCAA 1510
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | ||||| ||| ||| || | || |||||
Sbjct 1511 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAAT 1570
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 1571 ATCCAGAAGGAGTCGAC 1587
>seq136929
Length=1332
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || ||||| || || || || |||| || || ||||| | | |
Sbjct 345 ATGCAGATTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTGGAGGTGGAGAGCTCT 404
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || ||||| || ||||||| ||||||||||| || || |||||
Sbjct 405 GATACCATTGACAATGTCAAAGCCAAGGTTCAAGATAAGGAGGGTATCCCGCCGGATCAG 464
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || ||||| |||||| || || | ||||||| ||
Sbjct 465 CAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAAT 524
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 525 ATCCAGAAGGAGTCTACC 542
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || ||||||| || || ||||| || | || || | | ||
Sbjct 117 ATGCAGATCTTTGTGAAGACCCTAACCGGCAAGACCGTCACCCTCTATGTCGAGAGCTCC 176
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | ||||| || || || ||||||||||| || || || ||||||
Sbjct 177 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCAA 236
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | ||||| | | ||| || |||| |||||
Sbjct 237 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGGACCCTCGCCGACTACAAT 296
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 297 ATCCAGAAGGAGTCGAC 313
>seq16442
Length=1968
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| |||||||| || || || ||||| |||| || || ||| |||| | || |||||
Sbjct 210 GTCAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAG 269
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
|| |||| ||| | ||| || | || || || |||||||||||||| || || ||
Sbjct 270 TCCTCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCG 329
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || || || || || ||||| |||||| | ||||| ||| || || ||||
Sbjct 330 GACCAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGAC 389
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||||| || || || || ||
Sbjct 390 TACAACATCCAGAAGGAGTCGAC 412
>seq1583
Length=2309
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | ||||| ||||| ||||| | |||||||||| | |
Sbjct 134 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 193
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| |||||||| || |||||||||||||| || || ||
Sbjct 194 GACACCATAGATAATGTGAAAGCTAAAATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 253
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| | || | | || || ||
Sbjct 254 CAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAAT 313
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || || || | || ||||||| |||
Sbjct 314 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCGGTGGT 361
>seq41891
Length=414
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| ||||| | | | || ||| | ||| || | ||
Sbjct 5 ACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCAGACACCATTGACAATGTGAAGGCC 64
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| |||||||| |||||||| ||||||||||| || || | ||||| |||||||||||
Sbjct 65 AAGATTCAAGATAAGGAGGGGATTCCACCCGACCAGCAGAGGCTTATCTTTGCCGGCAAG 124
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| || ||| || | || ||||| || || || || || |||
Sbjct 125 CAGCTCGAGGATGGGCGTACCCTCGCAGACTACAATATCCAGAAGGAGTCTACC 178
>seq33539
Length=831
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| |||| || || ||| |||| | || ||||| ||
Sbjct 205 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 146
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| || | || || || |||||||||||||| || || | ||
Sbjct 145 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCTGGAC 86
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||||| |||| || | ||| ||| || | ||||| ||| || || |||| |||
Sbjct 85 CAGCAACGCGTTATCTTCGTCGGAAAATAGCTCGAGGACGGCCGGACTCTCGCCGACTAC 26
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || || ||
Sbjct 25 AACATCCAGAAGGAGTCGAC 6
>seq294161
Length=603
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| ||||||| || ||| ||||||| || || || | | |
Sbjct 8 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 67
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || || || |||||||| ||||| || || || ||
Sbjct 68 GATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 127
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| || ||| | | |||||||||
Sbjct 128 CAGAGGTTGATCTTTGCAGGGAAGCAGCTCGAGGATGGTCGTACCCTGGCTGATTACAAC 187
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || || | ||||| ||
Sbjct 188 ATCCAGAAGGAGTCGACTTTGCATTTGGT 216
>seq40208
Length=2036
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || ||||||| || || || | | |
Sbjct 598 GATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAGAGCTC 657
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| | |||| || || || ||||||||||| ||||| || |||||
Sbjct 658 CGACACGATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCGGATCA 717
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || ||||| || ||||| ||||| | | ||| | ||||||||||
Sbjct 718 GCAGAGATTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAA 777
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | || || || | |||||| | || |||
Sbjct 778 TATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGGT 826
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| ||||||| || ||| ||||||| || || || | | ||
Sbjct 371 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 430
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || |||||||| || || || || |||||
Sbjct 431 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCAGATCAG 490
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||| | ||||| | ||| | | |||||||||
Sbjct 491 CAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACAAC 550
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | ||||| || | || | ||||| ||
Sbjct 551 ATCCAGAAGGAGTCAACCCTCCATTTGGTGCTCCGTCTTCGCGGTGG 597
>seq312774
Length=892
Score = 82.4 bits (90), Expect = 6e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317
|||||||| || | || |||||| | ||| || ||||| ||||| |||||||||
Sbjct 219 ACTCTTGAGGTTGGAAGATTTGATACCATTGACAATGTCAAAGCCAAAATCCAAGACAAG 160
Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377
|| || || || || || || ||| | || | |||||| ||||| | | | |||||| |
Sbjct 159 GAAGGGATCCCCCCTGACCAGCAAAGGCTAAAATTTGCTGGCAAGCTGCTGGAGGATGTC 100
Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||||| | | || ||||| ||| ||| || |||||
Sbjct 99 CGCACTCTTGCTGACTACAATATTAGAAAGGACTCCAC 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418074880679095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |