Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq302619 122 9e-23
seq167275 118 1e-21
seq16442 116 4e-21
seq1583 116 4e-21
seq40208 111 2e-19
seq155405 100 3e-16
seq163152 98.7 1e-15
seq55815 98.7 1e-15
seq294161 89.7 6e-13
seq37689 89.7 6e-13
seq20182 89.7 6e-13
>seq302619
Length=692
Score = 122 bits (134), Expect = 9e-23
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | || ||| | ||| ||||| | ||| |||||||||||| ||||||||||||
Sbjct 556 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 497
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || |||||||| ||||| || ||||||| ||||||||| | |||
Sbjct 496 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 437
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157
| | ||| || ||| ||| | |||| | ||| | | | ||||| ||| ||
Sbjct 436 ATACCCTCTTTATCC-TGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC---TC 381
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | || |||||||| || || || ||||| ||||||||||||||
Sbjct 380 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||||||||||||||| ||||| || || || | || || |||||||| ||||| ||
Sbjct 292 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAA 233
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| |||| |||||||| | || | || ||||| || |||||| ||||| |
Sbjct 232 ATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTG 173
Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | ||||| ||| ||| || || | |||||||| ||||| || || |||||
Sbjct 172 TCGATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTA 116
Query 42195 ACAAAGATTTGCAT 42208
|| ||||| |||||
Sbjct 115 ACGAAGATCTGCAT 102
>seq167275
Length=2206
Score = 118 bits (130), Expect = 1e-21
Identities = 146/196 (74%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||||||||| || |||||||| | || || |||||||||||||| ||
Sbjct 386 CTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAA 445
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| |
Sbjct 446 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 504
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | || || ||| || || || | || ||||| || || || || ||||
Sbjct 505 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 561
Query 42193 TTACAAAGATTTGCAT 42208
| |||||||| |||||
Sbjct 562 TCACAAAGATCTGCAT 577
Score = 105 bits (116), Expect = 7e-18
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| |||||||| ||||||||||| ||||| || || ||||| | |||| |||
Sbjct 825 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCT 884
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||| ||||| || || ||||| | |||||| || | || | | |||||||||| |
Sbjct 885 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 944
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176
|| ||| ||| | | | | || || ||| |||||| || | ||||| ||
Sbjct 945 ATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTC 1001
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || || ||||| |||||||||||||||
Sbjct 1002 TTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 1034
Score = 102 bits (112), Expect = 9e-17
Identities = 164/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | || ||| | ||||||||||| || |||||| || || |||||||| |||
Sbjct 579 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 638
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| |||| | || || |||||||| || || || ||||| | ||||||||| | ||
Sbjct 639 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 698
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| || || |||||| ||| | || | |||| | | | ||||| ||| |||
Sbjct 699 ATGCCTTCTTTGTCC-TGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---TTC 754
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
||| || | || || ||||| || || | ||||| |||||||||||||||
Sbjct 755 CACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||| || | ||| ||| ||||| ||||||||||| || || || || |
Sbjct 1046 ACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCC 1105
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| |||||||| || || || || ||||| | |||||| || | || | || ||||||
Sbjct 1106 ATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTT 1165
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| ||| | |||| |||| | | | ||||| |||| || || || | |
Sbjct 1166 GTCC-TGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAATG 1221
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||||| || || || || ||||| |||||||| |||||
Sbjct 1222 TGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 1261
>seq16442
Length=1968
Score = 116 bits (128), Expect = 4e-21
Identities = 147/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || |||||||| |||| || ||||| || || |||||
Sbjct 407 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 348
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || ||||||||| ||| || || | |
Sbjct 347 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 288
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| || ||||| || | |||||| || || |||||||| || || ||
Sbjct 287 GTCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 228
Query 42197 AAAGATTTGCATTTTCACGCCG 42218
||||| ||||| || ||||||
Sbjct 227 GAAGATCTGCATCTTGACGCCG 206
>seq1583
Length=2309
Score = 116 bits (128), Expect = 4e-21
Identities = 160/220 (73%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| ||| ||||||||||||||| || || || || |||| |
Sbjct 349 ACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCC 290
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||||||||| || || || | | ||||||||| | || | | ||||||
Sbjct 289 ATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 230
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168
||| ||| |||| | ||| | | | | ||||| ||| |||||| || | |
Sbjct 229 ATCC-TGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAG 174
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||||||||||| || || ||||| ||||||||||||||
Sbjct 173 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| |||||||| || ||||||| | | || || |||||||| ||||||||
Sbjct 553 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAA 494
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|||||| | ||||||||| | || | || |||||| ||| ||| | || | ||| |
Sbjct 493 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC-TGAATCTTGGCTTTCACAT 435
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||| || ||| || || || | || ||||| || || || || || |
Sbjct 434 TGTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTT 378
Query 42193 TTACAAAGATTTGCAT 42208
| |||||||| |||||
Sbjct 377 TGACAAAGATCTGCAT 362
>seq40208
Length=2036
Score = 111 bits (122), Expect = 2e-19
Identities = 166/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || || | |||||| || | || |||||| || ||||||||||| ||
Sbjct 826 ACCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGC 767
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| |||| |||| || | ||||||||| ||||| || | || |||||| || | ||
Sbjct 766 CAGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGG 707
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156
| | |||||||||| ||| || |||| ||| | | | |||||| |||| |
Sbjct 706 AATTCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---T 651
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || |||| |||||||| || || || || ||||| || ||||| |||||
Sbjct 650 CAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 599
Score = 102 bits (112), Expect = 9e-17
Identities = 164/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || | ||| | ||||| || | || |||||| || || ||||| || ||
Sbjct 370 ACCGCCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 311
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||||| |||| || |||||||| || ||||| ||||| | ||||||||||| ||
Sbjct 310 CAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGG 251
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156
| | ||||||||| ||| || |||| ||| | | | ||||| |||| |
Sbjct 250 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---T 195
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || |||| ||||| || || || ||||| || || || ||||| |||||
Sbjct 194 CGACCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 143
Score = 93.3 bits (102), Expect = 5e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || | ||| | ||||| || | || |||||| || || ||||| || ||
Sbjct 142 ACCGCCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 83
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||||| |||| || |||||||| || ||||| ||||| | ||||||||||| ||
Sbjct 82 CAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGG 23
Query 42101 CACGCTCTCCTTGTCC 42116
| || ||||||||||
Sbjct 22 GATGCCCTCCTTGTCC 7
Score = 89.7 bits (98), Expect = 6e-13
Identities = 154/220 (70%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | || |||||| || || ||||||||||||| |||| |
Sbjct 586 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 527
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || ||||| || | | |||||| || | || | | |||||
Sbjct 526 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCTT 467
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| ||| || |||| ||| | | | ||||| |||| || || |||| |
Sbjct 466 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAG 411
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || || ||||| || || || ||||| |||||
Sbjct 410 TGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 371
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || ||||||||||||||||| || || | || ||
Sbjct 1263 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCG 1204
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | | ||||||||| | ||| | | ||||| ||| |
Sbjct 1203 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 1144
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGATGGTT 42176
|| || ||||| | | | || || ||| ||||| || | ||||||||
Sbjct 1143 ATCTTGGCTTTGACATTATCGATGGTATC---CGAACTCTCCACCTCCAAAGTGATGGTC 1087
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || | ||||| |||||||| |||||
Sbjct 1086 TTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 1055
>seq155405
Length=1148
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| ||||| || ||||||||||| ||||| || || ||||| | |||| ||
Sbjct 203 ACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 262
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||| ||||| || || ||||| | |||||| || | || | | |||||||||| |
Sbjct 263 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 322
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | || ||| |||||| || | ||||| || ||
Sbjct 323 ATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTC 382
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || ||||||||||||||||| ||||||
Sbjct 383 CCAGTAAGCGTCTTTACAAAGATCTGCATT 412
Score = 89.7 bits (98), Expect = 6e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 42026 AATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCG 42085
||| ||||| || || ||||| | |||| || | ||| ||||| || || ||||| |
Sbjct 1 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 60
Query 42086 CTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGT 42145
|||||| || | || | | |||||||||| ||||||| |||| | | | ||
Sbjct 61 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGT 120
Query 42146 GTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTG 42205
||| |||||| || | ||||| || || || || ||||||||||||||||| ||
Sbjct 121 ATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTG 180
Query 42206 CATT 42209
||||
Sbjct 181 CATT 184
>seq163152
Length=1956
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | ||| |||||| || ||||||||||| |||| ||| || |
Sbjct 1734 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 1793
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | ||||||||| ||||| || | | ||||||||| | || | | ||||||
Sbjct 1794 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 1853
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| ||| || |||| ||| | | | || || |||| || || |||| |
Sbjct 1854 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAG 1909
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || || ||||| || || || ||||| |||||
Sbjct 1910 TGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1949
Score = 96.9 bits (106), Expect = 4e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
||||||||||| || |||||| || ||||||||||| || ||||||| | || ||
Sbjct 1512 CACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 1571
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
| |||||||||||||| || | | |||||| || | ||| | | ||||| |||
Sbjct 1572 CAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 1631
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175
||| || |||| | | | |||||| |||| || || |||| ||||| ||
Sbjct 1632 GATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTC---TCAACTTCGAGAGTGATTGT 1688
Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || ||||| || |||||||||||
Sbjct 1689 CTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 1721
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| ||||| |||||||||||||| || || |||| ||
Sbjct 1285 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 1344
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | | |||||||| | ||| | | |||||| ||| |
Sbjct 1345 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGG 1404
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176
|| || ||||| | | | || || |||| || || || | ||||||||
Sbjct 1405 ATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTC 1461
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || | ||||| ||||| || |||||
Sbjct 1462 TTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 1493
>seq55815
Length=911
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||| || |||| ||| ||||||||||||||| || ||| | || |||| |
Sbjct 349 ACGAAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACAAGTGTCCTTCC 290
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || || || || | | || ||||| | || | | ||||||
Sbjct 289 ATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTT 230
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168
||| ||| |||| | ||| | | | | ||||| ||| |||||| || ||
Sbjct 229 GTCT-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAA 174
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||||||||||| || || ||||| ||||||||||||||
Sbjct 173 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
>seq294161
Length=603
Score = 89.7 bits (98), Expect = 6e-13
Identities = 150/213 (70%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||||||||| || |||||| || || |||||||||||||| || || | || ||
Sbjct 216 ACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCAGCCAGGGTACGACCATCCTCG 157
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | | ||||||||| | || | | ||||||||| |
Sbjct 156 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 97
Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175
|| || |||| ||| | | | || || |||| || || |||| ||||| ||
Sbjct 96 ATCTTGGCCTTGA-CGTTGTCGATGGTATCAGAGCTC---TCGACCTCGAGAGTGATCGT 41
Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || ||||| || || || ||||| |||||
Sbjct 40 CTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 8
>seq37689
Length=540
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||||||||||||||| ||| | || || | | || || |||||||||||||| ||
Sbjct 185 TCCTTTTGAATATTGTAGTCAACAAGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAA 244
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || | || ||||| | || | || |||||||| |||||| ||||| |
Sbjct 245 ATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTA 304
Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | ||||| ||| ||| || || | |||||||| ||||| || || |||||
Sbjct 305 TCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTG 361
Query 42195 ACAAAGATTTGCAT 42208
|| ||||| |||||
Sbjct 362 ACGAAGATCTGCAT 375
>seq20182
Length=796
Score = 89.7 bits (98), Expect = 6e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | || |||||| || || ||||||||||| ||||| || |
Sbjct 613 ACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCGGCC 672
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| ||||| || || || ||||||||||| | || | | ||||||
Sbjct 673 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 732
Query 42113 GTCC 42116
||||
Sbjct 733 GTCC 736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541018471523920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |