Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq163152 138 1e-27
seq155405 138 1e-27
seq167275 129 6e-25
seq40208 120 3e-22
seq136929 118 1e-21
seq23575 118 1e-21
seq302619 113 4e-20
seq16442 100 3e-16
seq1583 100 3e-16
seq20182 95.1 1e-14
seq55815 86.0 6e-12
seq37689 86.0 6e-12
seq104817 84.2 2e-11
seq167078 82.4 7e-11
>seq163152
Length=1956
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||||||| | || ||||| || || |||||||||||| ||
Sbjct 1723 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 1782
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || | ||| || || ||| ||||||| | |||||| || || ||
Sbjct 1783 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 1842
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||||| |||| || | ||| || | ||||||||
Sbjct 1843 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCAATGGTATCAGAGCTCTCGAC 1901
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||| || ||||| || ||||| || || ||||||||
Sbjct 1902 CTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1949
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || ||||| || ||||| |||||||| ||| || ||| || ||
Sbjct 1285 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 1344
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || ||||||| | ||||| || || || || |||||||| ||| |
Sbjct 1345 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGG 1404
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| || |||| | || | ||| |||| ||||| || || | || | || |||
Sbjct 1405 ATCTTGGCTTTGACATTATCAATGGTATCCGAGCTCTCAACCTCCAAAGTGATGGTCTTG 1464
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| || ||||||||||||||
Sbjct 1465 CCTGTCAAAGTCTTCACAAAAATCTGCAT 1493
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||||||| | || ||||| || || ||||||||||| | | || | ||| ||
Sbjct 1512 CACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 1571
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| || || |||||| | ||||| | ||||||||| || || || || ||||| |||
Sbjct 1572 CAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 1631
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
||| || ||||| | || | ||||| | ||||| ||||||| || | || ||
Sbjct 1632 GATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGATTGTCTT 1691
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| ||||| || || || || |||||
Sbjct 1692 CCCGGTGAGAGTCTTCACGAAGATTTGCAT 1721
>seq155405
Length=1148
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||||| || | |||||||| ||||| |||||||||||| |
Sbjct 412 TCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGC 471
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||||| ||| ||||||||||| || || |||| | | ||||||||| || ||
Sbjct 472 AAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGG 531
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||||| ||| || ||||| | |||| || || | |||||| ||
Sbjct 532 TATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTCTCAAC 591
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || || || || ||||| || ||||| |||||||||
Sbjct 592 CTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 640
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||| | ||||| || | || || || |||||||| ||||| || |
Sbjct 184 TCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGC 243
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | || || | |||||| || || |||| | | ||||||||| || ||
Sbjct 244 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 303
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| ||| ||||| | || | || || | || || ||
Sbjct 304 AATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 363
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || || || || |||||||| ||||||||
Sbjct 364 CTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 411
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||||||||| || ||||| || |
Sbjct 641 CCACCACGGAGTCTGAGAACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCG 700
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || ||||| || ||||| |||||| | || || || || ||
Sbjct 701 AGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGA 760
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| ||| || ||| |||| | || | ||||| | || || ||
Sbjct 761 ATTCCCTCCTTGTCTTGGATCTT-TGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAAC 819
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || ||||| || || ||||| ||||| ||||||||
Sbjct 820 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 867
>seq167275
Length=2206
Score = 129 bits (142), Expect = 6e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||||| || | || ||||||||||| ||||||||||| |
Sbjct 1034 TCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGC 1093
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||| || ||| ||||||||||| || || |||| | | ||||||||| || ||
Sbjct 1094 GAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGG 1153
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||||||| ||| | | || ||||| | |||| ||||| | ||||| |
Sbjct 1154 GATGCCCTCCTTGTCC-TGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCTCAA 1212
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
| || | || | || || || || ||||| || ||||| |||||||||
Sbjct 1213 CCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 1262
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||||||||||||||| | | || || ||| || ||||| || |||
Sbjct 381 GTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCA 440
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035
|| | || | | |||||| || ||||| ||||||||||||||| ||| | | ||| ||
Sbjct 441 GCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTT 499
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| | || | || || | |||||| || || | ||| | || || || || || ||
Sbjct 500 CACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGT 559
Query 127096 TTTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 560 CTTCACAAAGATCTGCAT 577
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || |||||||||||||| ||||| || |
Sbjct 1263 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 1322
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || ||||| || ||||| |||||| | ||||| || || ||
Sbjct 1323 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 1382
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| ||| || ||||| | || | ||||| | || || ||
Sbjct 1383 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 1442
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || ||||| || || ||||| ||||| ||||||||
Sbjct 1443 TCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1489
>seq40208
Length=2036
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | ||||| | |||||| || | || ||||| || || |||||||||||| ||
Sbjct 825 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 766
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | || || | ||| || || ||| ||||||||| ||||||||| || ||
Sbjct 765 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGA 706
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||||| |||| || | ||||| | ||||| ||
Sbjct 705 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTG-TCAATCGTGTCGGAGCTCTCAAC 647
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | || || ||||| || || || || || ||||||||
Sbjct 646 CTCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 599
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||| || || ||||||||||| ||
Sbjct 1281 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 1222
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || ||||| || || || ||||||| | |||||| || || ||
Sbjct 1221 AGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 1162
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| ||| ||| || |||| | |||| ||| |||| |||||| ||
Sbjct 1161 ATACCTTCCTTATCCTGGATCTTGGCTTTGACATTATCGATGGTATCCGAACTCTCCACC 1102
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || |||| ||| || ||||| ||||||||
Sbjct 1101 TCCAAAGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 1055
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || ||||| || || ||||||||||| | | || | ||| ||
Sbjct 1036 CACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 977
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| || ||||||||| ||||||| | ||||||||| || || || || ||||| |||
Sbjct 976 CAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 917
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
||| || ||||| | || | || || | ||||| || || | ||| | || ||
Sbjct 916 GATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTCTT 857
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| || || || ||||||||
Sbjct 856 CCCTGTCAAAGTCTTCACGAATATCTGCAT 827
>seq136929
Length=1332
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || |||||||| ||| | | || | || || ||||| |||||
Sbjct 313 GTCGACTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTGCCGTCCTCGAGCTGCTTTCCG 254
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | ||| ||||| ||||| ||||||||||||||| ||| || |||
Sbjct 253 GCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 194
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | |||||||| | || ||| || || |||||||| || ||
Sbjct 193 ACGTTG-TCGATGGTGTCGGAGCTCTCGACATAGAGGGTGACGGTCTTGCCGGTTAGGGT 135
Query 127096 TTTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 134 CTTCACAAAGATCTGCATG 116
Score = 109 bits (120), Expect = 5e-19
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || || ||||| |||||| ||| || ||| ||| || | ||| |||||
Sbjct 541 GTAGACTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCG 482
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT- 127035
||| ||||||| | |||||||| || || || |||||||| || ||| | ||||
Sbjct 481 GCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCT-TGAACCTTGGCTTT 423
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
|| | || | ||| || | ||||| || || | ||| | || ||||| |||| |||
Sbjct 422 GACATTGTCAATGGTATCAGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGT 363
Query 127096 TTTTACAAAAATCTGCATG 127114
|| |||||||||||||||
Sbjct 362 CTTCACAAAAATCTGCATG 344
>seq23575
Length=1941
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || |||||||| || | | || || || || ||||| |||||
Sbjct 1587 GTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCG 1528
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | ||| ||||| ||||| ||||||||||||||| ||| || |||
Sbjct 1527 GCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 1468
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | ||||| || |||| ||| || || |||||||| || ||
Sbjct 1467 ACGTTG-TCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGACGGTCTTGCCGGTAAGCGT 1409
Query 127096 TTTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 1408 CTTCACAAAGATCTGCATG 1390
Score = 105 bits (116), Expect = 6e-18
Identities = 146/202 (72%), Gaps = 7/202 (3%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || || ||||| |||||| ||| || ||| ||| || | ||| |||||
Sbjct 1816 GTAGACTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCG 1757
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA----TTTTCTG 127032
||| ||||||| | |||||||| || || || |||||||| || ||| || ||
Sbjct 1756 GCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCT-TGAAACCTTGGCT- 1699
Query 127033 CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092
|||| | || | ||| || | ||||| || || | ||| | || ||||| ||||
Sbjct 1698 -TTGACATTGTCAATGGTATCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAA 1640
Query 127093 AGTTTTTACAAAAATCTGCATG 127114
||| || |||||||||||||||
Sbjct 1639 AGTCTTCACAAAAATCTGCATG 1618
>seq302619
Length=692
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| |||| || || || |||||||||||||| || |
Sbjct 328 CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 269
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| |||||||| | |||| || ||||| || || ||
Sbjct 268 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 209
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| ||||| || |||||| |||| | |||| |||||| | || || ||
Sbjct 208 ATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCAACC 149
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || ||||| || ||||| || || || ||||||||
Sbjct 148 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 102
>seq16442
Length=1968
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| |||||||| | || | ||||| || | || ||||| || || || ||||| |||
Sbjct 445 GCGCCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCG 386
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| | || || || || ||||||||||| ||| |||| | |||||||| || ||
Sbjct 385 GCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGC 326
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| |||||||||||||| ||| || ||| | | |||| |||||| | |||
Sbjct 325 GGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCC 266
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | || | ||| || || || || ||||| || || ||||||||
Sbjct 265 ACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 216
>seq1583
Length=2309
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | || ||||| ||||||||||| || || |
Sbjct 360 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 301
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || ||||| || || || | ||||| | |||||| || || ||
Sbjct 300 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 241
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||| ||| ||| ||| |||| | | || | |||||| | || || ||
Sbjct 240 ATACCCTCCTTATCC-TGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCAC 182
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| | || | ||||||||||| || || || ||||| || ||||||
Sbjct 181 TTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 133
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| |||||||| | | || | ||| || ||||| ||||||
Sbjct 558 GTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCA 499
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035
||| | || | | |||||| || || || ||||||||||| ||| ||| | | || ||
Sbjct 498 GCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC-TGAATCTTGGCTTT 440
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| | || | || || | |||||| || || | || | || || || ||||||||
Sbjct 439 CACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGT 380
Query 127096 TTTTACAAAAATCTGCAT 127113
||| ||||| ||||||||
Sbjct 379 TTTGACAAAGATCTGCAT 362
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||||||||| || | || || || || ||||||||||| || |
Sbjct 132 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCA 73
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| ||||||||||| || || | || | | |||||| || |||||
Sbjct 72 AGAGTGTGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 13
Query 127007 ATGCCCTCCTTG 127018
||||||||||||
Sbjct 12 ATGCCCTCCTTG 1
>seq20182
Length=796
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||||||| | || || || || || || |||||||| ||
Sbjct 146 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCC 205
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| ||||| || |||| | | |||||| || || ||
Sbjct 206 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 265
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| || || ||||| | || | |||||| | | ||| ||
Sbjct 266 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACC 325
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || |||| || || || || ||||||||
Sbjct 326 TCAAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 372
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||||||| | || ||||| || || || |||||||| |
Sbjct 602 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 661
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || ||||| |||||| |||||||| || || ||
Sbjct 662 AGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 721
Query 127007 ATGCCCTCCTTGTCC 127021
|| ||||||||||||
Sbjct 722 ATTCCCTCCTTGTCC 736
>seq55815
Length=911
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||| || || | || ||||| ||||||||||| || || |
Sbjct 360 CCACCGCGCAGACGAAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACA 301
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || ||||| || || || | ||||| | || || || || ||
Sbjct 300 AGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGA 241
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| ||| ||| |||| | | || | |||||| | || || ||
Sbjct 240 ATACCCTCCTTGTCT-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCAC 182
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| || | | ||||||||||| || || || ||||| || ||||||
Sbjct 181 TTCCACAATGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 133
>seq37689
Length=540
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||| || | || || || |||||||||||||| || |
Sbjct 149 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACA 208
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | ||| || ||||| || ||||| | |||| | || || || || ||
Sbjct 209 AGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGG 268
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| |||||||| |||||| |||| | || | |||||| | || || ||
Sbjct 269 ATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAACC 328
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || ||||| || ||||| || || || ||||||||
Sbjct 329 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 375
>seq104817
Length=483
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960
|||||| | || | || ||||||||||| ||||| ||||| | | || ||| |||
Sbjct 342 CAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTGCAAGGGTTCGACCATC 283
Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020
|| | ||| || ||||| | |||| || ||||||||| ||||| ||||| ||||||||
Sbjct 282 TTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAGGGATGCCTTCCTTGTC 223
Query 127021 C 127021
|
Sbjct 222 C 222
>seq167078
Length=762
Score = 82.4 bits (90), Expect = 7e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||||||||||||||| ||||| | | || ||| ||| || | ||| || |||
Sbjct 605 GTTGACTCTTTTTGAATATTATAATCTGCAAGGGTTCGACCATCTTCCAACTGCTTACCA 546
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021
|| | |||| || ||||||||| ||||| ||||| ||||| |||
Sbjct 545 GCAAAAATCAGTCTCTGCTGATCCGGAGGGATGCCTTCCTTATCC 501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473579996687120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |