Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq322356 125 9e-24
>seq322356
Length=2453
Score = 125 bits (138), Expect = 9e-24
Identities = 311/465 (67%), Gaps = 18/465 (4%)
Strand=Plus/Plus
Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTA---TC 15973
||| || ||||| | | || ||||| || | |||| ||||| || |||| ||
Sbjct 625 ATCGAGAATATCTGCCCTGTTAGTTGCTGCAACCACAATGATACCAGT---GTTACCCTC 681
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033
|||||||||||| |||||||||||||| |||| || ||||| | ||||||||| ||
Sbjct 682 AAAACCATCCATTTCTGTCAAAAGCTGATTAAGGGTCTGTTCTCTTTCATCATTGCCT-- 739
Query 16034 CATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090
|||| |||| | | ||| ||| || |||||||| ||||||| || || ||
Sbjct 740 -CCACCAATTCCAGTTCCTCTTTGACGTCCAACAGCATCAATTTCATCAACAAATACAAT 798
Query 16091 GCATGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACA 16148
||| ||| ||||| ||| |||| ||| ||||| || || || || || |||
Sbjct 799 GCAAGGTGCGTTTTCCTTAGC--CTTCTTAAAAAGATCACGGACTCGAGAAGCACCAACA 856
Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207
||||||||||| || ||||| | | | | | || | || || || ||| || |||
Sbjct 857 CCAACAAACATTTCAACAAACTCAGAACCTG-AGATAGAGAAAAAAGGAACACCAGCTTC 915
Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267
||| ||||| || || || |||||||| || || ||||| || | || || |
Sbjct 916 ACCAGCAATTGCCTTCGCTAGCAGAGTCTTTCCAGTTCCTGGAGGGCCAACAAGAAGAAC 975
Query 16268 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327
||| ||||| || ||| || | |||||||||| | ||| | || |||||
Sbjct 976 CCCTTTAGGAATGCGAGCTCCAACAGCAGTGAATCTCTCAGGCTTCTTTAAGAACTCCAC 1035
Query 16328 AATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372
| || | || || | ||||| | || | ||| |||||||
Sbjct 1036 CACTTCCACAAAATCCTGCTTGGCTTCATCCACCCCAGCAACATC 1080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618234887797360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |