Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq171303 118 1e-21
>seq171303
Length=2772
Score = 118 bits (130), Expect = 1e-21
Identities = 175/246 (71%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791
||||||| ||| ||||||| || ||| ||| ||||||||| | || |||||
Sbjct 952 GGTGAGTTGGGGGCAGATATTGTGGTGGGTTCCGCGCAGAGGTTTGGTGTGCCGATGGGG 1011
Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851
||||||||||||||||| |||||| | || ||| | | |||| ||||| | ||| |||
Sbjct 1012 TATGGAGGTCCTCATGCAGCATTCCTGGCCACATCTCAGGAGTACAAGAGGATGATGCCT 1071
Query 153852 GGCAGAATTGTAG--GTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCAC 153909
|| |||||| | | || ||| || ||| | || || ||| | | ||
Sbjct 1072 GGAAGAATTATTGGTGTAAGT--GTTGATTCTTCGGGGAAGCCTGCACTGCGTATGGCCA 1129
Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTC 153969
| ||||| || ||||| |||||||| || ||||| || ||||| ||||| ||||| ||||
Sbjct 1130 TGCAGACAAGGGAGCAACATATCAGAAGGGACAAGGCTACCAGCAACATTTGCACTGCTC 1189
Query 153970 AGGCAC 153975
||| ||
Sbjct 1190 AGGTAC 1195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576873048173920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |