Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq171293 105 9e-18 >seq171293 Length=1713 Score = 105 bits (116), Expect = 9e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 ||||||| |||||||||| | ||||| || ||||||||||| ||||| || | ||| Sbjct 1485 GTTTCAAGAGTAACATCAGAGGAAGGATAGGCGACACAAGTGAGGACAAAGCCACCATCA 1426 Query 32693 ATTTGATCATCATCCAAGAACG-ACTGATCACTTTGGTCTACTGTACCAGATACAATCTT 32751 || || ||||||| |||||| | ||| ||| ||||| || || ||| |||| ||| Sbjct 1425 ATCTGGTCATCAT-CAAGAAAGCTCTGGTCAGACTGGTCGACGGTGCCATCAACAACCTT 1367 Query 32752 ACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTC 32811 || || || || || |||| ||| || ||||| ||||| | || | || | || Sbjct 1366 GCCGGCGCAGGAAGAGCAGGAACCGGCGCGACAGGAGTAAGGGAGGTCGAGACCTGCCTC 1307 Query 32812 CTCTGCTGCATCAAGGATGTATTGATCATCAG 32843 ||| || || || || ||||| |||||||| Sbjct 1306 CTCGGCGGCGTCGAGAATGTAGACATCATCAG 1275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 662806110415160