Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq167275 149 5e-31
seq1583 138 9e-28
seq55815 134 1e-26
seq302619 132 4e-26
seq20182 132 4e-26
seq136929 111 1e-19
seq23575 109 4e-19
seq40208 104 2e-17
seq163152 102 6e-17
seq167078 96.9 3e-15
seq104817 96.9 3e-15
seq155405 93.3 3e-14
seq194843 82.4 6e-11
seq129847 82.4 6e-11
>seq167275
Length=2206
Score = 149 bits (164), Expect = 5e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||||| || || ||||| |||||||||||||| || || |||| || || ||
Sbjct 1278 AGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCC 1337
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || ||||||||| | |||| |||||||| || || || || ||||| ||||||
Sbjct 1338 TCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCT 1397
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | ||||||||| ||| || || || || |||||
Sbjct 1398 TGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTC 1457
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | |||||| ||||| ||||||||
Sbjct 1458 TTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1489
Score = 111 bits (122), Expect = 1e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || || || || || || ||||| ||||| || | || | |
Sbjct 590 ACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACC 649
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || ||| | || | || ||||| || || ||||| || |||||
Sbjct 650 ATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 709
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||| || ||| ||||| | ||| |
Sbjct 710 GTCCTG-AATCTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 768
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||||| || || || || || ||||| || ||||||
Sbjct 769 TAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || ||| || ||||| || | || ||||| ||||||||||| || || ||
Sbjct 806 TCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGC 865
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | || || | ||||| || ||| | || | || |||||||| || ||
Sbjct 866 AAGAGTTCTTCCGTCCTCTAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 925
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||||| ||||| || | ||| ||| ||| | || | || ||||| ||| ||
Sbjct 926 AATACCCTCCTTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCAC 985
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| | || || || || ||||| | ||| || ||||| || ||||||
Sbjct 986 CTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 1034
>seq1583
Length=2309
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| |||||||| || || ||||| || |||||||| ||||| || |||
Sbjct 360 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 301
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || || ||| | ||||| || ||||| || || |||
Sbjct 300 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 241
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| || || || |||||| | ||| ||| | |||| |||||||| ||| ||
Sbjct 240 ATACCCTCCTTATCCTG-AATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCAC 182
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || |||||||| || | ||| || ||||| || |||||
Sbjct 181 TTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
>seq55815
Length=911
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| ||||| || || || ||||| || |||||||| ||||| || ||
Sbjct 360 CCACCGCGCAGACGAAGCACTAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAACA 301
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || ||||| ||| | ||||| ||||| || || || |||
Sbjct 300 AGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGA 241
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| |||||| | ||| ||| | || | |||||||| ||| ||
Sbjct 240 ATACCCTCCTTGTCTTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCAC 182
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | | | || |||||||| || | ||| || ||||| || |||||
Sbjct 181 TTCCACAATGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
>seq302619
Length=692
Score = 132 bits (146), Expect = 4e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| |||||||| ||||| || ||||||||||| ||||| || | ||||||
Sbjct 545 ACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCC 486
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | || | ||| ||||| || || || |||||||||||
Sbjct 485 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 426
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| |||| || || | || | ||||||||| || || || | ||||
Sbjct 425 ATCCTG-AATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTA 367
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||| | || || ||||| || |||||
Sbjct 366 TGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330
>seq20182
Length=796
Score = 132 bits (146), Expect = 4e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||||||||| |||||||| || || ||||| ||||| || | ||||||
Sbjct 157 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCC 216
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || ||| | || | || ||||| || || || |||||||| ||
Sbjct 217 ATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 276
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||||||| || || ||||| || |
Sbjct 277 GTCCTG-AATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA 335
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || ||||| || || || ||||||||
Sbjct 336 TGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 372
Score = 102 bits (112), Expect = 6e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| ||||||||||| || || || || || || ||||| ||||| |||
Sbjct 602 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 661
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || || ||||||||| | |||| | ||||| ||||| |||
Sbjct 662 AGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 721
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| ||||| || ||| || | || || | || | ||||||||| || ||
Sbjct 722 ATTCCCTCCTTGTCCTG-AATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 780
Query 29739 TTCAAGAGTTATAGT 29753
||||| || |||||
Sbjct 781 CTCAAGGGTGATAGT 795
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || || || || || || || || || || || | ||||||
Sbjct 385 ACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCC 444
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || ||| | || | || ||||| || || ||||| || || ||
Sbjct 445 ATCCTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 504
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||||| | || | |||||||| || || ||||| || |
Sbjct 505 GTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGA 563
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| || || || ||||| ||||||||
Sbjct 564 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 600
>seq136929
Length=1332
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || || || || |||||||| || | || |||
Sbjct 560 ACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCGGCCAAAGTACGACC 501
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || || || | ||||| ||||||||||||||||| |||||||| ||
Sbjct 500 ATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTT 441
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | || ||||||| | || | || ||||| || || || || || ||
Sbjct 440 ATCTTGAACCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCCAGGGTGAT 381
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| || || || ||||| ||||||||
Sbjct 380 GGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 345
>seq23575
Length=1941
Score = 109 bits (120), Expect = 4e-19
Identities = 155/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || || || || |||||||| || | || |||
Sbjct 1835 ACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCGGCCAAAGTACGACC 1776
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || || || | ||||| ||||||||||||||||| |||||||| ||
Sbjct 1775 ATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTT 1716
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| || || | ||||||| | || | || || || || || || || || |
Sbjct 1715 ATCTTGAAACCTTGGCTTTGACATTGTCAATGGTATCGGAGCTCTCCACCTCCAGGGTGA 1656
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || |||||||| || || || ||||| ||||||||
Sbjct 1655 TGGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 1619
>seq40208
Length=2036
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| || |||||||| ||||| || || || || || || || ||||| ||
Sbjct 825 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 766
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || || | || || || || | |||||||| ||||||||||| |||
Sbjct 765 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGA 706
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | || ||||| | || | ||||| || || ||
Sbjct 705 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCAACC 646
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || | ||| || || || ||||||||
Sbjct 645 TCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 599
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || || || || || || ||||| ||||| || | ||| | |
Sbjct 586 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 527
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| ||||| || || || || | ||||| || |||||||| || || || || || ||
Sbjct 526 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCTT 467
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||| | || | ||||| || || || || ||||| ||
Sbjct 466 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGAT 407
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || |||| |||||| || || ||||||||
Sbjct 406 CGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 371
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || ||||| || || || || || |||||||||| || | |||
Sbjct 1038 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 979
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | ||| || ||||| | ||||| || ||||||||||| || || || || || ||
Sbjct 978 TCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 919
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | || || || || || || || || || ||
Sbjct 918 TGGATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTC 859
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || |||||||||||
Sbjct 858 TTCCCTGTCAAAGTCTTCACGAATATCTGCAT 827
>seq163152
Length=1956
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || ||||| || || || || || ||||| || | || ||
Sbjct 1734 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 1793
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || || || | ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 1794 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 1853
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||| | || | || ||||| || || || ||||| ||
Sbjct 1854 GTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACCTCGAGAGTGAT 1913
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || |||| |||||| || || ||||||||
Sbjct 1914 CGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1949
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||||||||| || || || || || || || || |||||||||| || | |||
Sbjct 1510 AGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 1569
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | ||| || ||||| | ||||| || ||||||||||| || || || || || ||
Sbjct 1570 TCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 1629
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | ||||| || || ||||| ||||| || ||
Sbjct 1630 TGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGATTGTC 1689
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | || || || || || |||||
Sbjct 1690 TTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 1721
>seq167078
Length=762
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||||||||| | || || | || || || || ||||||||||| |||||||| ||
Sbjct 636 TCCTCCCCTCAACCTCAAAACAAGGTGGAGAGTTGACTCTTTTTGAATATTATAATCTGC 577
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||| ||| ||| || | || || |||||| | |||| ||| ||||||||||| ||
Sbjct 576 AAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAGG 517
Query 29679 AATACCCTCTTTGTCTTGTAA 29699
|| || || || || || ||
Sbjct 516 GATGCCTTCCTTATCCTGAAA 496
>seq104817
Length=483
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||||||||| | || ||| | || || || || |||||||| || |||||||| ||
Sbjct 357 TCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTGC 298
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||| ||| ||| || | || || |||||| | |||| ||| |||||||| || ||
Sbjct 297 AAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAGG 238
Query 29679 AATACCCTCTTTGTCTTGTAA 29699
|| || || ||||| || ||
Sbjct 237 GATGCCTTCCTTGTCCTGAAA 217
>seq155405
Length=1148
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || || || ||||| || | || ||||| ||||||||||| || || ||
Sbjct 184 TCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGC 243
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | || || | ||||| || ||| | || | || |||||||| || ||
Sbjct 244 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 303
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||||| ||||| || | || |||||| | || | || || || ||| ||
Sbjct 304 AATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 363
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || || || ||||| | || || ||||| |||||||||
Sbjct 364 CTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATT 412
>seq194843
Length=321
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| ||||||||||| || || || || || || || || || || ||
Sbjct 130 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCT 189
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || || || ||| | || | || ||||| |||||||||
Sbjct 190 AGGGTGCGGCCATCCTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGA 249
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || ||| || | ||||| | || | |||||||| || ||
Sbjct 250 ATGCCTTCCTTGTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGAC 308
Query 29739 TTCAAGAGTTAT 29750
||||| || ||
Sbjct 309 CTCAAGGGTGAT 320
>seq129847
Length=1368
Score = 82.4 bits (90), Expect = 6e-11
Identities = 117/162 (72%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-ATCATCGAGTTGTTTGCC 29648
||||| |||||| || || || || |||| |||| ||| ||| ||||| | |||||
Sbjct 1201 GTGGAGTCTTTTCTGATATTGTAGTCAGCAAGAGTGC-AGACATCCTCGAGCAGCTTGCC 1259
Query 29649 AGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTT 29708
|||| || ||| |||||||| || || || || || || |||||||| | ||| |||
Sbjct 1260 AGCAAATTTCAGCCTTTGCTGGTCAGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCTTT 1319
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||| | || | || ||| | | | || |||||||||||
Sbjct 1320 GACATTGTCAATGGTATCAAATCTTCCAACCTCAAGAGTTAT 1361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 383701995280983
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |