Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq27794 82.4 1e-10 >seq27794 Length=2292 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 51979 TGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAT 52038 ||||| | | ||||||||||||||||||||||||||||||||| | ||||||||||| | Sbjct 334 TGACTTCACCTTATAATGCTGATTTTGATGGGGATGAAATGAATGTCCATGTTCCTCAGT 393 Query 52039 CATATGGAGCTACTGCTGAA 52058 || || | ||| || ||| Sbjct 394 CACTTGAAACTAGGGCAGAA 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632611776265640