Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq321971 100 7e-16 >seq321971 Length=1964 Score = 100 bits (110), Expect = 7e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| || | || || |||||| | ||||| || |||||||||||| Sbjct 266 CATTTGAATGATGGAGACTTTGTCCTCTTCAATCGTCAACCCAGTCTCCATAAAATGTCT 207 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 || |||| || | | ||||| | | || | || |||||| ||||| | || Sbjct 206 ATTATGGGGCACAGAATCAAAATCATGCCTTACTCAACTTTTCGACTAAATCTCTCTGTC 147 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | ||||||| ||||| ||||||||||| ||||||||||||||||| || || || ||| Sbjct 146 ACTTCGCCTTACAATGCTGATTTTGATGGGGATGAAATGAATATGCACGTTCCCCAGTCA 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181898770818643