Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq16442 125 6e-24
seq163152 123 2e-23
seq167275 118 1e-21
seq294161 116 3e-21
seq155405 111 1e-19
seq302619 109 5e-19
seq40208 109 5e-19
seq20182 107 2e-18
seq136929 100 3e-16
seq1583 96.9 3e-15
seq194843 82.4 7e-11
seq104817 82.4 7e-11
>seq16442
Length=1968
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | || || |||| || ||||| || || || ||
Sbjct 407 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 348
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| || | || ||||||||| |||||| ||||| | |
Sbjct 347 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 288
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || |||||||||| ||||||||| || ||||| | ||||||||
Sbjct 287 GTCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 228
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 227 GAAGATCTGCAT 216
>seq163152
Length=1956
Score = 123 bits (136), Expect = 2e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| |||| ||| || |||| || |||||||| || |||||
Sbjct 1302 CTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAA 1361
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| |||||||||| || | | |||||| ||| |||||| || | | |
Sbjct 1362 GATCAACCTTTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGGATCTTGGCTTTGACATT 1421
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | || || |||| || ||||||| ||||| || || || |||||||| ||
Sbjct 1422 ATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTT 1478
Query 35722 CACAAATATCTGCAT 35736
|||||| ||||||||
Sbjct 1479 CACAAAAATCTGCAT 1493
Score = 123 bits (136), Expect = 2e-23
Identities = 158/214 (74%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||| || || |||||||||||||| ||||| | || ||
Sbjct 1740 CACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCCATCCTC 1799
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| ||||||||| || || ||||||| ||||||||||| |||| | ||||||||||
Sbjct 1800 CAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 1859
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702
|||||| ||| | |||| | | || || |||| || ||||| | |||||||
Sbjct 1860 GATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAGTGATCG 1915
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || || | ||||| || || ||||||||
Sbjct 1916 TCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1949
>seq167275
Length=2206
Score = 118 bits (130), Expect = 1e-21
Identities = 166/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||||| | | ||||||||| | || |||||| || ||||||||||| |||
Sbjct 579 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 638
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || | | || || |||||||| || ||||| || | || ||||||||| | |||
Sbjct 639 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 698
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| || || |||||| ||||| ||| | | | | | ||||| ||| ||||
Sbjct 699 ATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---TTCC 755
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || || ||||| || |||||||| |||||||| || |||||||
Sbjct 756 ACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATTC 807
Score = 114 bits (126), Expect = 1e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||||||||| |||||||| || | || || | || || ||||||||||| |||||
Sbjct 386 CTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAA 445
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||| | || ||||||||||| ||||| || |||||||||| |||||| |||| | |
Sbjct 446 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 505
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | || || ||| || ||||||| || || || || || || | || ||
Sbjct 506 ATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTT 562
Query 35722 CACAAATATCTGCAT 35736
|||||| ||||||||
Sbjct 563 CACAAAGATCTGCAT 577
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | || | ||||| || | || ||| |||||||||||||| || ||
Sbjct 1263 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 1322
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || |||||||| || ||||| |||| || |||||||| | ||
Sbjct 1323 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 1382
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||||||||| ||||||| ||| | | | | | ||||| ||| |||
Sbjct 1383 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCT---TTCA 1439
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741
||||| | ||||| || || || || | ||||||||||| ||||||| |||||
Sbjct 1440 ACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCA-TCTGT 1493
Score = 107 bits (118), Expect = 2e-18
Identities = 167/235 (71%), Gaps = 8/235 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || || || ||||||||||||||||| || |
Sbjct 805 TTCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTG 864
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| | |||| |||| || | ||| ||||| ||||| || | || |||||| || | |
Sbjct 865 CAAGAGTTCTTCCGTCCTCTAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 924
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGAT 35683
||| | |||||||||| |||| ||||||| | ||| | | || || ||| |
Sbjct 925 GAATACCCTCCTTGTCCTGGATC-TTTGCTTTAACATTGTCAATTGTATCAGAGCT---T 980
Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||||||||| ||||| || || || || | || |||||||| || |||||||
Sbjct 981 TCCACCTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATTC 1035
>seq294161
Length=603
Score = 116 bits (128), Expect = 3e-21
Identities = 156/213 (73%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||||||| || || |||||| || ||||||||||| |||| ||| || | || ||
Sbjct 216 ACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCAGCCAGGGTACGACCATCCTCG 157
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || ||||| ||||||| ||||||||||| ||| | | ||||||||| |
Sbjct 156 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 97
Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703
||||| ||| | |||| | | || || |||| || ||||| | ||||||||
Sbjct 96 ATCTTGGCCTTGA-CGTTGTCGATGGTATCAGAGCTC---TCGACCTCGAGAGTGATCGT 41
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || | ||||| || || ||||||||
Sbjct 40 CTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 8
>seq155405
Length=1148
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || || || ||||||||||||||||| || |
Sbjct 183 TTCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTG 242
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| | |||| |||| |||| ||| ||||| ||||| || | || |||||| || | |
Sbjct 243 CAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 302
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| | |||||||||| |||||| ||| | | | | | || ||| |||||
Sbjct 303 GAATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCA 362
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||||| ||||| || || || || | || || ||||| ||||||||||
Sbjct 363 CCTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATTC 413
Score = 107 bits (118), Expect = 2e-18
Identities = 173/246 (70%), Gaps = 7/246 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | || | ||||| || | || ||| ||||| |||||||| || ||
Sbjct 641 CCACCACGGAGTCTGAGAACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCG 700
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || ||| |||| || |||||||| || ||||| |||| || || ||||||| |||
Sbjct 701 AGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGA 760
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||||||||| ||||||| || | | | | | ||||| ||| |||
Sbjct 761 ATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCT---TTCA 817
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGCA 35746
||||| | ||||| || || || || | ||||||||||| ||||||| ||||| ||
Sbjct 818 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCA-TCTGTTGACA 876
Query 35747 CACACA 35752
|| |||
Sbjct 877 CAAACA 882
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || | ||| ||||||||| || ||||||||||
Sbjct 411 TTCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGG 470
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| | ||| || | || || ||||| || || ||||| || | || |||||| || | |
Sbjct 471 CAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 530
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684
| | || |||||||||| ||||||| ||| | | | | | || || ||| |
Sbjct 531 GTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTC---T 587
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| ||||||| ||||| || || || || | ||| || ||||| ||||||||
Sbjct 588 CAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 639
Score = 86.0 bits (94), Expect = 6e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 35554 AATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCG 35613
||||||||| || || | |||| |||| |||| ||| ||||| ||||| || | ||
Sbjct 1 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 60
Query 35614 CTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGT 35673
|||||| || | || | | |||||||||| ||| ||| ||| | | | | | ||
Sbjct 61 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGT 120
Query 35674 GTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTG 35733
||| ||||||||||| ||||| || || || || | || || ||||| |||||
Sbjct 121 ATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTG 180
Query 35734 CATTC 35738
|||||
Sbjct 181 CATTC 185
>seq302619
Length=692
Score = 109 bits (120), Expect = 5e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||||| | | ||| ||||| | || ||||||||||||||||||||| |||
Sbjct 556 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 497
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| || | | ||||||||| | ||
Sbjct 496 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 437
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||| || ||| |||||| ||||| |||| | | ||||| ||| ||
Sbjct 436 ATACCCTCTTTATCCTGAATCTTTGCCTTCA-CGTTGTCAATGGTGTCAGAACTC---TC 381
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| || || ||||| || || | ||| |||||||| || |||||
Sbjct 380 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 330
Score = 82.4 bits (90), Expect = 7e-11
Identities = 167/243 (69%), Gaps = 9/243 (4%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | || | ||||| |||| || ||||||||||| ||||| || ||
Sbjct 328 CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 269
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| |||| | |||||||| | |||
Sbjct 268 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 209
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGATTC 35685
| || ||||| || ||| ||| || || | | | | | ||||| ||| |||
Sbjct 208 ATGCCTTCCTTATCTTGGAT-TTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTC 153
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGC 35745
||||| | ||||| || || || || | ||| || || || ||||||| ||||| | |
Sbjct 152 AACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCA-TCTGTTCTC 94
Query 35746 ACA 35748
|||
Sbjct 93 ACA 91
>seq40208
Length=2036
Score = 109 bits (120), Expect = 5e-19
Identities = 155/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||| || ||||||||||| |||||||| | |||| ||
Sbjct 580 CACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACCGTCCTC 521
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||| || || || ||||||| |||||| || | || | | |||||||||
Sbjct 520 GAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCTTGTCCTG 461
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702
|||||| ||| | |||| | | ||||| |||| || ||||| | |||||||
Sbjct 460 GATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATCG 405
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || || | |||||||| || ||||||||
Sbjct 404 TCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 371
Score = 109 bits (120), Expect = 5e-19
Identities = 155/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || || ||||||||||||| ||| | |||| ||
Sbjct 808 CACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTC 749
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| ||||||||| || || ||||| | |||||| |||| |||| | ||||||||||
Sbjct 748 CAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTG 689
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702
|||||| ||| | |||| | | |||||| |||| || ||||| | ||||| |
Sbjct 688 GATCTTAGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TCAACCTCGAGAGTGATGG 633
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || || | || ||||| || ||||||||
Sbjct 632 TCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 599
Score = 109 bits (120), Expect = 5e-19
Identities = 142/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || || |||||||| |||| ||| || | || || |||||||| || |||||
Sbjct 1246 CTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAA 1187
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||||| || | | ||||| ||| |||||| || | | |
Sbjct 1186 GATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGGATCTTGGCTTTGACATT 1127
Query 35665 TGCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | || || ||| |||||||||| ||||| || || || |||||||| ||
Sbjct 1126 ATCGATGGTATC---CGAACTCTCCACCTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTT 1070
Query 35722 CACAAATATCTGCAT 35736
|||||| ||||||||
Sbjct 1069 CACAAAGATCTGCAT 1055
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | |||||| || | || |||||| || || |||||||| ||
Sbjct 1053 CCACCACGAAGCCTGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCA 994
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || | | || |||| ||||| || || || ||||||| |||||| |||| ||
Sbjct 993 AGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 934
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATTCC 35686
| | ||||| ||| |||||| ||| | | | | || ||| ||| ||
Sbjct 933 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTC---TCA 877
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| || || || || || |||||||| ||||| |||||||||||
Sbjct 876 ACCTCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTCACGAATATCTGCAT 827
>seq20182
Length=796
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||||||| | || ||||| || ||||||||||| |||
Sbjct 146 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCC 205
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| || | || ||||||||| | ||
Sbjct 206 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 265
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| ||||| ||| | | | | | ||||| || ||||||
Sbjct 266 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACC 325
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || || ||||| || || || || ||||||||
Sbjct 326 TCAAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 372
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||||||| | || |||||| || ||||||||||| ||
Sbjct 602 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 661
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || |||||||| || ||||| |||| ||||||||||||| |||
Sbjct 662 AGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 721
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| ||| || || | | |||| | | ||||| || |||||
Sbjct 722 ATTCCCTCCTTGTCC-TGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 780
Query 35689 CTCCACCGTGATCGT 35703
||| | ||||| ||
Sbjct 781 CTCAAGGGTGATAGT 795
>seq136929
Length=1332
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || || || ||||||||||| || || | || |||| |||||| || || ||
Sbjct 536 CTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCGGCGAA 477
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
||||||| ||||| |||| || | | |||||| | | ||| | || || || | |
Sbjct 476 GATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTAT-CTTGAACCTTGGCTTTGACAT 418
Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
| | | || || |||| |||||||||| ||||| || || || |||||||| |
Sbjct 417 TGTCAATGGTATCAGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCT 361
Query 35721 TCACAAATATCTGCAT 35736
||||||| ||||||||
Sbjct 360 TCACAAAAATCTGCAT 345
>seq1583
Length=2309
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||||||||| || || || || | || | | || ||
Sbjct 343 CACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTC 284
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| ||||| ||||||| ||||||||| | |||| | |||||| ||| |
Sbjct 283 AAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCC-T 225
Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702
|| ||| || |||| | | | | ||||| ||| |||||| |||| ||||| |
Sbjct 224 GAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGG 168
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || | || || ||||| || |||||
Sbjct 167 TTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 134
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| || | || | | | || || |||||||| || || ||
Sbjct 553 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAA 494
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||| | || ||||||||| | || | || |||||| ||| ||||| |||| | |
Sbjct 493 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTTGGCTTTCACATT 434
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||| || ||| || ||||||| || || || || || |||| ||||||
Sbjct 433 GTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTTT 377
Query 35722 CACAAATATCTGCAT 35736
||||| ||||||||
Sbjct 376 GACAAAGATCTGCAT 362
>seq194843
Length=321
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||||||| | || |||||| || || ||||| || ||
Sbjct 130 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCT 189
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| || | || ||||||||||| |||
Sbjct 190 AGGGTGCGGCCATCCTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGA 249
Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652
| || ||||||||| |||||
Sbjct 250 ATGCCTTCCTTGTCCTGAATCTT 272
>seq104817
Length=483
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 35505 TATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAAT 35564
|| |||| || | ||||||||||| | || | || ||| ||||| || || ||||
Sbjct 361 TAGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAAT 302
Query 35565 CGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCG 35624
| || | |||||| | || |||| ||||||||| ||||| |||| | |||||| || |
Sbjct 301 CTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTG 242
Query 35625 AAGGAACGCTCTCCTTGTCC 35644
||| | || |||||||||
Sbjct 241 GAGGGATGCCTTCCTTGTCC 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448972602348040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |