Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06]
323,163 sequences; 214,184,023 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq167275 82.4 6e-11
>seq167275
Length=2206
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| |||| |||||| || || || || |||||||| |||| || | ||| ||
Sbjct 596 CACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACCATCCTC 655
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
| || || || ||| | || ||||| || |||||| ||| | ||||||||||||
Sbjct 656 AAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTG 715
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTT 101206
||| || || |||| | | || |||| | | || ||| | |||||||||
Sbjct 716 AATCTTCGCCTTGACATTATCAATTGTGTCTGAG--CTTTCCACTTCCAAAGTAATAGTT 773
Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239
|| || ||||| || || | ||| |||||||||
Sbjct 774 TTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408047330840217
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |