Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 338 6e-88 seq4 174 2e-38 seq5 147 2e-30 seq1 143 3e-29 seq3 131 2e-25 seq2 109 6e-19 >seq6 Length=38222195 Score = 338 bits (374), Expect = 6e-88 Identities = 559/796 (70%), Gaps = 17/796 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| ||| | ||||| ||||||| || ||||| || ||||||||||| Sbjct 28139635 GAGCCGCTCCTGATGGCCAACCCGGACCGGTTCTGCATGTTCCCGATTCAATACCCGGAG 28139576 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCT- 116694 || ||| |||||||| ||||||||||||||||||||||||| ||||||||| || || Sbjct 28139575 ATCTGGGAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGGTCGATCTC 28139516 Query 116695 GTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | |||| || | || ||||||| | | | | | |||| || ||||||| || Sbjct 28139515 GATCAAGACCA-GCGCCACTGGGAAACCCTAACCCCCGGCGAGAAGCACTTCATCACTCA 28139457 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 ||| || ||||| ||||||||| |||||||||||| ||||||||| | || | || Sbjct 28139456 CGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAGAATCTTGCCGGAAGGTT 28139397 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | ||||||| ||||| | |||||||| |||||||||||| |||||||| || || Sbjct 28139396 CATGAAGGAGGTCCAGGTCTCGGAGGCGCGTGCCTTCTACGGCTTCCAGATCGCGATTGA 28139337 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | ||||| || ||||| |||| |||| || ||| | ||||| || Sbjct 28139336 GAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAGACCTACATCAAAGACTCGGACGA 28139277 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| |||| | || ||| |||| || || || |||||| | ||||| |||| Sbjct 28139276 GAAGTCCCGTCTCTTCCGGGCCGTCGACACCATCCCTTGCGTCGCGAAAAAGGCGCAGTG 28139217 Query 116995 GGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 ||| ||| ||||||| |||| || | |||| ||||| | ||||||||||| Sbjct 28139216 GGCCCTGAAATGGATCGACGGCTCCGA---AACTTTCGCGGAGCGGATCGTGGCCTTCGC 28139160 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 ||| || || ||||||| ||||| || ||| ||| ||||||||||| || || || Sbjct 28139159 CTGCGTGGAAGGGATCTTCTTCTCGGGAAGCTTCTGCGCGATATTTTGGCTAAAAAAGCG 28139100 Query 117115 CGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 ||| | ||||| || ||||| ||| |||||| | ||||| | || || || || || Sbjct 28139099 CGGGTTGATGCCGGGTCTGACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTCCA 28139040 Query 117175 TTGCGACTTTGCCTG--TTTGCTGTTCAAGCATTTGG-TGCAGC-GACCGAGCGCGGCGC 117230 |||||||| || || || || || | | || || ||| ||||| || || Sbjct 28139039 CTGCGACTTCGCGTGCCTTCTCTACTCCCTCCTCCGGATGAAGCTCACCGA----GGAGC 28138984 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 |||| | | ||||| ||||||| | ||| ||| || ||| || ||| ||| Sbjct 28138983 GCGTGAAGTCAATCGTGCGGAACGCGGTTGACATAGAGAAGGAGTTCGTCTGCGACGCGT 28138924 Query 117291 TGCCGGTGCGTCT--GCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGT 117348 | || ||||| || | ||||| | || | || |||| || |||||||||||||| Sbjct 28138923 TACC-GTGCGCCTTAGTTGGGA-TGAACGGTGATCTGATGGGTCAGTACATCGAGTTCGT 28138866 Query 117349 CGCCGACAGGCTGCTG 117364 ||| || ||||||||| Sbjct 28138865 CGCTGATAGGCTGCTG 28138850 Score = 161 bits (178), Expect = 1e-34 Identities = 179/236 (76%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 40682 TCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741 ||| || |||||||| || || ||||| || || ||||| ||||||||| |||| |||| Sbjct 34520512 TCCCAATCATGCAAATTTTTGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCG 34520453 Query 40742 AAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800 | | |||||| ||| | |||| |||||| || || | ||||| ||||||||||| Sbjct 34520452 AGAGCTCCGACACCGTCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCT 34520394 Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860 | |||||||| | ||||||| ||| || || ||||| || |||| || |||||| | Sbjct 34520393 CCTGACCAGCAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTCGCC 34520334 Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||||||| | || || || || ||| | || | ||||| || Sbjct 34520333 GACTACAACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGTCTCAGGGGTGG 34520278 Score = 140 bits (154), Expect = 3e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 40682 TCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741 ||| || ||||| || ||||| ||||| || || ||||| ||||||||| |||| || | Sbjct 34538415 TCCCAATCATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAGGTTG 34538356 Query 40742 AAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800 | | |||||| | | | |||| |||||| || || | ||||| ||||||||||| Sbjct 34538355 AGAGCTCCGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCT 34538297 Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860 | |||||||| | ||||||| ||| || || ||||| || |||| || || | | Sbjct 34538296 CCCGACCAGCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCC 34538237 Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||||||| | || || || || ||| | || | ||||| || Sbjct 34538236 GACTACAACATCCAGAAGGAGTCAACTCTCCACCTGGTGCTCCGTCTCAGGGGTGG 34538181 Score = 125 bits (138), Expect = 7e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| |||||||| ||||| || ||||| || |||||||| |||| || || Sbjct 22062938 AAAGATGCAGATATTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTGGAGAG 22062997 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || ||||| | | | | |||||| || || | ||||| || |||||||| | || Sbjct 22062998 CAGCGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGA 22063057 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || ||||||| ||| || || ||||| || |||| |||||| | |||||| Sbjct 22063058 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTA 22063117 Query 40866 CAACATCCAGAA 40877 |||||||||||| Sbjct 22063118 CAACATCCAGAA 22063129 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || |||||||| |||| || || | || Sbjct 34537950 ATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 34537891 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||||| || || | || || ||||| || ||| |||| || Sbjct 34537890 GACACGATTGACAACG-TCAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCA 34537832 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || ||| |||| |||| | ||||| ||| ||||| Sbjct 34537831 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAA 34537772 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || |||||||| || Sbjct 34537771 TATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGG 34537724 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || || ||||| |||| ||||| | | Sbjct 34520276 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 34520217 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| || || | ||||| ||||| || ||| ||||||| Sbjct 34520216 GATACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 34520158 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||| |||| || | || || | ||| ||||| Sbjct 34520157 GCAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAA 34520098 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||| || ||| | ||| Sbjct 34520097 TATCCAGAAGGAGTCCACCCTCCATTTGGTG 34520067 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || || ||||| |||| ||||| | || Sbjct 34538179 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 34538120 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAG-AGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| | | || |||||| | || | Sbjct 34538119 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGGAAGGGATCCCCCCAGATC 34538061 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | | |||| ||| || || ||||| || |||| | ||| | || |||| Sbjct 34538060 AGCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACA 34538001 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||| | || || ||| | ||| Sbjct 34538000 ACATCCAGAAGGAGTCAACCCTCCATTTGGTG 34537969 >seq4 Length=23292877 Score = 174 bits (192), Expect = 2e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| || ||||||||| |||| || || || || Sbjct 18773194 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCCTCC 18773253 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||||||||| ||||||| Sbjct 18773254 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 18773312 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 18773313 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 18773372 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 18773373 CATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCGCCTCCGCGGTGGCG 18773422 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| ||||| || || || || |||||||| | || ||||| Sbjct 15563499 AATATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGT 15563440 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | |||| | || || | |||||||| |||||||| | || Sbjct 15563439 AGTGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCCAGAT 15563380 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || |||| |||| || ||||| || ||||| || | | || || || ||| Sbjct 15563379 CAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTAC 15563320 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| |||||| | || || || || |||||| | | ||||| || Sbjct 15563319 AACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTGAGGCTCAGGGGAGG 15563270 >seq5 Length=29328693 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| ||||| || |||||||| ||||||||| |||| || || | || Sbjct 21081046 ATGCAGATATTCGTGAAAACCCTAACGGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 21080987 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| |||||||||||| | ||||| Sbjct 21080986 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 21080928 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| ||| ||||| ||| |||| || | ||||| ||| || || || Sbjct 21080927 GCAGAGGCTCATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACTCTCGCAGATTATAA 21080868 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 21080867 CATCCAGAAGGAGTCTACACTCCACCTTGT 21080838 Score = 109 bits (120), Expect = 6e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || || || || ||||| || ||||| ||| ||||| |||| || || | |||| Sbjct 19804206 GCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTCCGA 19804265 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | | |||| |||| | || || | ||||| ||||||||||| | || || | Sbjct 19804266 CACCATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCAAC 19804324 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | | ||||||| || || || ||||| || |||| || |||||| |||||||| | Sbjct 19804325 AGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAATA 19804384 Query 40871 TCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| | || || || || ||| Sbjct 19804385 TCCAGAAGGAGTCGACTCTCCACCTCGTG 19804413 >seq1 Length=22681039 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || || ||||| | || || || || Sbjct 22555362 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 22555303 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | | |||| || || | ||||| ||||||||||| ||||| Sbjct 22555302 TCCGACACCATCGATAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGAC 22555243 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| ||| || |||||||| || |||| || || ||| ||||||| Sbjct 22555242 CAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGACTAC 22555183 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 22555182 AACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGCCTCCGCGGTGGCG 22555131 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || || ||||| | || || || || Sbjct 22583380 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 22583321 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | | |||| || || | ||||| ||||||||||| |||| Sbjct 22583320 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCTGGAC 22583261 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| || |||| || || ||| |||| || |||| || || ||| || |||| Sbjct 22583260 CAGCAACGCCTTATCTTCGTCGGAAAATAGCTCGAGGACGGCCGGACTCTCGCCGTCTAC 22583201 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 22583200 AACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGCCTCCGCGGTGGCG 22583149 >seq3 Length=27879571 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| ||||| || |||||| | || || || | | Sbjct 183553 ATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 183612 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || |||| ||||| ||||| |||||| ||||||| Sbjct 183613 GACACCATTGACAACGTT-AAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 183671 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| ||||| || || | || ||||| || ||||| Sbjct 183672 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGATTACAA 183731 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||| | ||| Sbjct 183732 CATCCAGAAGGAGTCGACCCTCCATTTGGTG 183762 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| ||||| || |||||| |||| || ||| | | Sbjct 13774228 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCTCT 13774287 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| ||| || | ||||| ||||| |||||| | |||||| Sbjct 13774288 GACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAG 13774347 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | || |||| || ||||| ||||| || |||| || || || ||||||||| Sbjct 13774348 CAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACAAC 13774407 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || || ||| |||| || || || ||| Sbjct 13774408 ATTCAAAAAGAGTCCACCCTCCACCTGGTG 13774437 Score = 105 bits (116), Expect = 7e-18 Identities = 137/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| |||| || || | |||||| | | | |||| |||| | Sbjct 6885504 ACCGGCAAGACCATCACCCTCGAGGTAGAGAGCTCCGACACCATCGACAACG-TCAAAGC 6885562 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||||||||| | ||||| || | ||||||| || || || Sbjct 6885563 CAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAACAGAGGCTCATCTTTGCCGGAAA 6885622 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || |||| || |||||| |||||||| |||||||||||| | || || || Sbjct 6885623 GCAGCTCGAGGACGGCCGGACCCTCGCAGACTACAATATCCAGAAGGAGTCGACTCTCCA 6885682 Query 40893 TCTAGTG 40899 || ||| Sbjct 6885683 CCTCGTG 6885689 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || ||||||||| | || ||||| | | Sbjct 183781 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 183840 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| ||||| || ||||| ||| | ||||| Sbjct 183841 GACACCATTGACAACG-TCAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 183899 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || ||||| || || | |||||||| |||||||| Sbjct 183900 GCAGAGGCTTATCTTTGCCGGGAAGCAGCTTGAGGATGGCCGCACCCTAGCAGACTACAA 183959 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| | || || ||| | ||| Sbjct 183960 TATCCAGAAGGAGTCTACCCTCCATTTGGTG 183990 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || |||||||| | || || || | | Sbjct 13774456 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 13774515 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| ||| |||| ||||| |||||||||||| | || ||| Sbjct 13774516 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 13774575 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||||||||| || || | || || ||| || ||||| Sbjct 13774576 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTACAAT 13774635 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| || ||| |||| || || || ||| Sbjct 13774636 ATCCAAAAAGAGTCCACCCTCCACCTGGTG 13774665 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || || || |||||| | || || ||| | Sbjct 13656680 ATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACAATCACCTTGGAGGTTGAAAGTTCA 13656739 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | |||||| ||| |||| |||||||||||||| || | |||||| Sbjct 13656740 GATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAG 13656799 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||| | || || |||||||| || || | ||||| || |||||||| Sbjct 13656800 CAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCGCACTCTTGCGGACTACAAT 13656859 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||| | || || || | |||||||| Sbjct 13656860 ATTCAGAAGGAATCAACTCTTCACTTGGTGTTGCG 13656894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| | || || || | | Sbjct 184009 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCTTGGAGGTGGAGAGCTCT 184068 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||| ||||| | |||||| Sbjct 184069 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 184128 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || ||||| || || | || ||||| ||||||||| Sbjct 184129 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGACTACAAC 184188 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| |||| || ||| | ||| Sbjct 184189 ATCCAGAAGGAATCCACCCTTCATTTGGTG 184218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| | || || || | | Sbjct 184237 ATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 184296 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| ||||| ||||| || || | |||||| Sbjct 184297 GACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAG 184356 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| ||||| || |||| ||| || || |||||||| Sbjct 184357 CAGAGGCTTATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACTCTTGCAGACTACAAT 184416 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 184417 ATCCAGAAGGAGTCTACCCTTCACCTTGT 184445 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||||||||||| || || |||||| | | Sbjct 13841528 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAAACCATCATTGTGGAAGTCGAAAGCTCT 13841469 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || | ||||||| ||||| ||||| || ||| | ||||| Sbjct 13841468 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAA 13841409 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | | || | || ||||| ||||| || || | | || || ||||| || Sbjct 13841408 CAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAAT 13841349 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || |||||| |||| ||||| ||||| Sbjct 13841348 ATTCAAAAGGAGTCCACTCTGCAATTAGTG 13841319 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || || || ||||| | || || || || Sbjct 13841756 ATGCAAATCTTTGTTAAGACCCTCACCGGTAAGACAATCACTTTGGAGGTTGAGAGTTCC 13841697 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | |||||| ||| |||| ||||| |||||||| || | |||||| Sbjct 13841696 GATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 13841637 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||| | || || |||||||| || || | | ||| || || |||||| Sbjct 13841636 CAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCACACTCTTGCAGATTACAAC 13841577 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| | || || || | |||||||| Sbjct 13841576 ATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCG 13841542 >seq2 Length=33308843 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| ||||| ||||||||| | || || ||| | | Sbjct 6939514 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCTCT 6939455 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||| || | ||||| ||||| || ||| |||||| Sbjct 6939454 GACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCGA 6939395 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | || |||| || ||||| ||||| || |||| ||| || ||| || |||||| Sbjct 6939394 CAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGAATACAAC 6939335 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || ||| |||| || || Sbjct 6939334 ATCCAAAAAGAGTCCACTCTCCA 6939312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || ||||| ||||| || || || || |||||| | || || ||| | | Sbjct 6939060 AATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTC 6939001 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | | | |||||| |||||| | ||||| ||||| |||||| | || || Sbjct 6939000 CGATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCA 6938941 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || || |||||| |||| |||| | || || |||||||| Sbjct 6938940 GCAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAA 6938881 Query 40869 CATCCAGAAGGA 40880 ||| || ||||| Sbjct 6938880 CATTCAAAAGGA 6938869 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| ||| || | ||||| |||||||| ||| | || ||||| | ||||||| | Sbjct 6939211 TCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAGCAGAGGCTCATCTTTG 6939152 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||||||||| || || | |||||||| ||| ||||| ||||| |||||| | | Sbjct 6939151 CCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAATATCCAAAAGGAGTCTA 6939092 Query 40886 CGCTGCATCTAGTG 40899 | || || || ||| Sbjct 6939091 CTCTTCACCTGGTG 6939078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199570148480