Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq4 125 5e-24 seq6 122 6e-23 seq3 114 8e-21 seq2 105 4e-18 seq5 98.7 6e-16 >seq1 Length=22681039 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||||||||| | ||| || ||||| ||||||||||||| Sbjct 22555133 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22555192 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | ||| || || ||||| ||||| |||||||||| || |||| Sbjct 22555193 AGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 22555252 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | || | || | |||| || || || Sbjct 22555253 -ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCAC 22555311 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||| || || || || || |||||||| |||||||||||| Sbjct 22555312 CTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 22555360 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||||||||| | ||| || ||||| ||||||||| ||| Sbjct 22583151 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGACGGCG 22583210 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | || || || |||| || || || |||||||| | || Sbjct 22583211 AGAGTCCGGCCGTCCTCGAGCTATTTTCCGACGAAGATAAGGCGTTGCTGGTCCAGCGGG 22583270 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| || || || Sbjct 22583271 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCCACC 22583330 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||| || || || || || |||||||| |||||||||||| Sbjct 22583331 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 22583378 >seq4 Length=23292877 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||| ||||| | ||| || ||||| ||||||||||||| Sbjct 18773420 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18773361 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || ||| |||| || | ||||||||| ||||| ||||| ||||||||||| | |||| Sbjct 18773360 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 18773301 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 18773300 -ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCAC 18773242 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || || || |||||||| ||||||||||| Sbjct 18773241 CTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18773194 >seq6 Length=38222195 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| || ||||| ||||||||||||| || ||| |||| Sbjct 34538196 AGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTCCGGCCGTCC 34538255 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||||| |||||||||| || | || ||||||||| Sbjct 34538256 TCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 34538315 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || | |||||||| Sbjct 34538316 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTC 34538375 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || |||||||| ||||||||||| Sbjct 34538376 TTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 34538407 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| || ||||| ||||||||||||| || |||| |||| Sbjct 34520293 AGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCC 34520352 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||||| ||||||||| || | || ||||||||| Sbjct 34520353 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 34520412 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | | | |||| ||||| || | |||||||| Sbjct 34520413 TGGATCTTGGCCTTGACGTTGTCGACGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTC 34520472 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || ||||||||||| || ||||| Sbjct 34520473 TTGCCGGTTAGGGTTTTCACAAAAATTTGCAT 34520504 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||||| ||||||||||||| | || || ||| |||| || | |||||| || ||||| Sbjct 22063131 CTTTCTGGATGTTGTAGTCGGCCAAGGTG-CGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 22063073 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| || || | || |||||||| ||||| ||| | || | Sbjct 22063072 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22063013 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || || || | |||||||| || || || || |||||||| Sbjct 22063012 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 22062953 Query 34379 AAGATCTGCATC 34390 || ||||||||| Sbjct 22062952 AATATCTGCATC 22062941 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||||| || | || || ||||| || ||||| |||| | Sbjct 34520050 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 34520109 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || ||||||||||| || ||||| || | || ||||||||| ||| Sbjct 34520110 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 34520169 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | ||| | ||||| Sbjct 34520170 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACC 34520229 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || ||||| || ||||| || ||||||||||| Sbjct 34520230 TCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 >seq3 Length=27879571 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || || ||||||||||| | || ||||| || ||||||||||| | Sbjct 13774454 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 13774395 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| || || || |||| |||||||| ||| Sbjct 13774394 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 13774335 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| |||||| ||| | || | | || | || | ||| || Sbjct 13774334 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 13774275 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || ||||| ||||| ||||||||||||||||||||| Sbjct 13774274 TCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCATC 13774227 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||||||||| | || ||||| || || ||||| || | Sbjct 13774683 TCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGC 13774624 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| |||| | || || | ||| ||||| || || ||||||| |||||| || ||| Sbjct 13774623 GAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGG 13774564 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TT 34337 | || ||||||||| |||||| ||| | || |||||| | ||| || | Sbjct 13774563 GATGCCCTCCTTGTCCTGAATCTTTGCCTTGACAT----TATCGATTGTGTCAGAGCTCT 13774508 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| |||||||| || || |||||||| || |||||||||||||| Sbjct 13774507 CAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || |||| ||| || || ||| || || ||||||||||| | Sbjct 13774911 TCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGC 13774852 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | |||| |||||||| || ||||| || ||||||| |||||| || ||| Sbjct 13774851 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 13774792 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGA 34340 | | ||||||||| |||||| |||||| || | | || | ||| | ||| | Sbjct 13774791 AATACCCTCCTTGTCCTGGATCTTT-GCTTTAACATTGTCAATTGTATCAGAGCTTTCCA 13774733 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| || || || || || || ||||||||||| ||||| Sbjct 13774732 CCTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCAT 13774684 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || || ||||||||||||| ||| ||| || || || |||||||| | Sbjct 13656450 CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 13656391 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | |||||| || || ||||| || | |||||||| ||| Sbjct 13656390 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 13656331 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || || ||| ||||| | || | | || | || | ||| || Sbjct 13656330 ATGCCTTCCTTATCTTGGAT-TTTGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCAAC 13656272 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| |||||||| || || |||||||||||| Sbjct 13656271 CTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCATC 13656223 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||| || | || || ||||| |||||||| || | Sbjct 183779 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 183720 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || || ||||||||||| ||| Sbjct 183719 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 183660 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | || || || Sbjct 183659 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACC 183600 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || ||||||||||| |||||||| || || |||||| Sbjct 183599 TCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCATC 183552 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || | || | | || || | |||||| || ||||| Sbjct 13657326 TCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAAT 13657267 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 ||||||| ||||||||| ||| | || |||||| || ||||| ||||| | || Sbjct 13657266 ATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTTG-GCTTTCACATT 13657208 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | |||| ||| | || || |||| || ||||| || || || |||||||| || Sbjct 13657207 GTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTTTGAC 13657148 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 13657147 AAAGATCTGCAT 13657136 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | ||||||| ||| | ||| || || || || || ||||| | Sbjct 13657134 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 13657075 Query 34223 AGCTGACGGTCG-TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || || || | |||||| ||||| ||||| | || ||||||||| || Sbjct 13657074 AG-TGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGAGG 13657016 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||| || || ||| ||||| | || |||| | || | ||| | Sbjct 13657015 AATACCCTCCTTATCCTGAAT-TTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCA 13656957 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||||||||||||||| || || || |||||||| ||||| Sbjct 13656956 CTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || || || |||||||| | ||| ||| || || || |||||||| || Sbjct 13841986 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCA-AC 13842044 Query 34223 AGCTGACGGTCG-TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | ||| || || | |||||| || || ||||| |||| || ||||| ||| Sbjct 13842045 AAGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGG 13842104 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||| ||||| | || | || | || | ||| | Sbjct 13842105 GATGCCTTCCTTGTCGTGGAT-TTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAA 13842163 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | |||||||| ||||| |||||||| || || ||||||||||| Sbjct 13842164 CCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 13842212 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || |||||||||||||| || | ||| | | || Sbjct 13775123 AGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACCATCC 13775064 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| ||||| || ||||||| ||||||||| ||| | || || ||||| Sbjct 13775063 TCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 13775004 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTCGACGTCCACCGTGAT 34353 |||||| ||| | || |||| | | ||| || ||| || |||| || || Sbjct 13775003 TGAATCTTTGCCTTGACAT----TATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAAT 13774948 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || | ||| ||||||||||| ||||| Sbjct 13774947 AGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 13774912 >seq2 Length=33308843 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || |||| ||| || ||| ||| || || ||||||||||| | Sbjct 6938832 TCCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCTGC 6938891 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | |||| |||||||| || ||||| || ||||||| |||||| || ||| Sbjct 6938892 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 6938951 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| || ||| ||| | || | | || | ||||| ||| || Sbjct 6938952 GATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 6939011 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || || || || || || |||||||||||||| Sbjct 6939012 CTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 6939059 Score = 102 bits (112), Expect = 5e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | ||||||||||| | |||| || || || || ||||| |||| Sbjct 6939060 TCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGC 6939119 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||| ||||| || || ||||||| |||||| || ||| Sbjct 6939120 AAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGG 6939179 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| |||||| ||| | || | || | ||| | || || Sbjct 6939180 TATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTCTCAAC 6939239 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||||||| || || |||||||| || |||||||||||||| Sbjct 6939240 CT-CAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || || || |||| ||| | ||| ||||| || |||||||| || | Sbjct 6939288 CCACCACGGAGTCTGAGAACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTATTCAGCG 6939347 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| || || || |||| || |||| ||| Sbjct 6939348 AGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTCGGTCCGGGGGA 6939407 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| |||||| ||||| | || | | || | || | ||| || Sbjct 6939408 ATTCCCTCCTTGTCTTGGATCTTT-GCTTTGACATTGTCAATAGTGTCAGAGCTTTCAAC 6939466 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct 6939467 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCATC 6939515 >seq5 Length=29328693 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| ||||| || || | || ||| | || Sbjct 21080835 AGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCC 21080894 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||||||||||||| ||||| ||||||| ||||||||| ||| | || ||||||||| Sbjct 21080895 TCCAACTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 21080954 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || | |||||||| Sbjct 21080955 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTC 21081014 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || |||||||| || |||||||| Sbjct 21081015 TTGCCCGTTAGGGTTTTCACGAATATCTGCAT 21081046 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||| ||||| | ||| || ||||| || |||||||| | Sbjct 19804430 CCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCG 19804371 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || || || ||||||| ||| || || || Sbjct 19804370 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGG 19804311 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||||| | | | | || | |||| || || Sbjct 19804310 ATGCCCTCCTTGTCCTGGATCTTG-GCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 19804252 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGC 34387 || | |||| ||| |||||||| || || ||||||||||||||| Sbjct 19804251 CTCGAGGGTGACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGC 19804206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323059998682880