Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 113 6e-20 >seq1 Length=22681039 Score = 113 bits (124), Expect = 6e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || |||| ||| |||||||| | || | || || | |||| |||||| || ||| || Sbjct 15714602 CCTTTTGCCTCCCCCCTGATCAACATAACGGGCAGTATCATTAAAAACTCGCAGCATAGG 15714543 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 ||| || ||||||||||| ||||| || || ||||| || ||| | |||||||| || Sbjct 15714542 AATGATGCCATTGGATGTCCCATTTGTTCCACGAATATAACTGCCAGTGGCACGAATGTT 15714483 Query 66326 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385 || || | ||| |||||||| || ||| ||| | || ||| || || || Sbjct 15714482 GTGAACAGAGACACCAATTCCCCCAGCTGATTTGCTGATGACAGCACATTCCTTCAAGGT 15714423 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 |||||| ||||| || || |||||||| ||||| | || || |||||| Sbjct 15714422 ATCATATATGCCTTCAATGCTATCATCTTTCATGCATACAAGGAAGCAGCTA 15714371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658147723616320