Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 156 1e-32 seq2 150 4e-31 seq3 149 1e-30 seq5 136 9e-27 seq6 118 2e-21 >seq4 Length=23292877 Score = 156 bits (172), Expect = 1e-32 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || || || | || || || || || || || || || | Sbjct 15563268 TTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG 15563327 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || ||||| ||||| || |||||||| || || ||||||||||| |||| Sbjct 15563328 CAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAG 15563387 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 | || |||||||| ||||| ||||| ||||| ||||| || | |||||| ||| || | Sbjct 15563388 GGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCTCGA 15563447 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 |||| | || || ||||| || || || ||||| || || || ||||| |||| Sbjct 15563448 CCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATTGT 15563501 >seq2 Length=33308843 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || || ||||| || || || | ||||| || || || Sbjct 6938391 AAGGACAAGGTGAAGGGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATC 6938450 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || |||||||| || |||||||| || || ||||| || ||||| || || Sbjct 6938451 TTCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 6938510 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||| ||||| || | ||||| | |||||||| | || || || Sbjct 6938511 CTGAATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGT 6938570 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||||||||| || ||||| |||||||| Sbjct 6938571 CTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 6938603 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || || || || |||| || || | ||||| || || || || ||| Sbjct 6939318 GTGGACTCTTTTTGGATGTTGTATTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 6939377 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| ||| | || || || ||||| || || || || ||||||||||| Sbjct 6939378 GCAAAGATCAGCCTTTGTCGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 6939437 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| || || || ||||| || || || Sbjct 6939438 ACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGG 6939494 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 6939495 GTTTTCACAAAGATCTGCAT 6939514 Score = 113 bits (124), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || | ||| | || || ||||||||||| || || || Sbjct 6938602 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCT 6938661 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || ||||| || || || ||||| ||||| || |||||||| || || || Sbjct 6938662 GCCAGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGG 6938721 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || |||||||| |||||||||||||| || || || || | || || ||| | Sbjct 6938722 GGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCT---T 6938778 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | ||||| || || || || | || || ||||| || |||||| Sbjct 6938779 TCCACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 6938832 >seq3 Length=27879571 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| ||||| | ||||| | ||| || ||||| ||||| || Sbjct 13656876 GTTGATTCCTTCTGAATATTGTAGTCCGCAAGAGTGCGACCATCCTCTAGCTGTTTCCCT 13656817 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| || || ||||| || || ||||| |||||||||||||| || Sbjct 13656816 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTG 13656757 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | ||| ||||| | || || ||||| || || || || Sbjct 13656756 ACATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTC 13656697 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 13656696 TTGACAAAGATTTGCAT 13656680 Score = 149 bits (164), Expect = 1e-30 Identities = 158/207 (76%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| ||||| || ||||| || ||||| | |||||||| ||||| || | ||| Sbjct 13774886 TGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGT 13774827 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || ||||| || |||||||| ||||| || || || || || || ||||| |||||| Sbjct 13774826 TTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTT 13774767 Query 104477 GCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||||| ||||| || | ||||| ||| ||| ||||| | ||| || ||||| ||| Sbjct 13774766 GCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTCTTCCCA 13774710 Query 104534 GTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || || ||||| || |||||| Sbjct 13774709 GTAAGGGTCTTCACAAAGATTTGCATT 13774683 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || || |||||||| || || | |||||| | || || Sbjct 13775352 AAGGACGAGGTGAAGGGTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATC 13775293 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || |||||||| || |||||||| || || ||||| || || || || || Sbjct 13775292 TTCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 13775233 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||| ||||| || | ||||| | |||||||| | || || || Sbjct 13775232 CTGAATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGT 13775173 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || ||||| |||||||| Sbjct 13775172 CTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 13775140 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || || || | ||||| || || || Sbjct 13657348 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 13657289 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| || || |||||||| || || || || || || || ||||| Sbjct 13657288 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 13657229 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| ||||| ||||| || | ||||| | |||||||| | ||| || || Sbjct 13657228 CTGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGT 13657169 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| ||||| |||||||| Sbjct 13657168 CTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 13657136 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || || | ||||| ||| || ||||| ||||| || Sbjct 13841560 GTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGTGACCATCCTCTAGCTGTTTCCCT 13841619 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| || || ||||| || || || || |||||||||||||| || Sbjct 13841620 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTG 13841679 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| | || || |||||||| || || || Sbjct 13841680 ACATTATCAATTGTATCGGAACTCTCAACCTCCAAAGTGATTGTCTTACCGGTGAGGGTC 13841739 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 13841740 TTAACAAAGATTTGCAT 13841756 Score = 129 bits (142), Expect = 1e-24 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || |||| || ||||| || |||||||| ||||||| || || | Sbjct 13656441 AGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGT 13656382 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || |||||||||||||| || || || || || || || || ||||| Sbjct 13656381 CCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCC 13656322 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 ||||| || || || ||||| ||||| || | ||| || ||| ||| ||||| || Sbjct 13656321 TTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGG 13656265 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || || || |||||||| Sbjct 13656264 GTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 13656224 Score = 118 bits (130), Expect = 2e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||||| || ||||| ||||| ||||| | ||| || | || || Sbjct 183993 AAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATC 183934 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || ||||| || |||||||| || || || || || ||||| || || Sbjct 183933 CTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 183874 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||| || || || || || | ||| || || | || ||||| || || || | Sbjct 183873 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACCTCAAGGGTGATGG 183815 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 183814 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 183781 Score = 118 bits (130), Expect = 2e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||| | || || | Sbjct 6885697 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGG 6885638 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 6885637 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 6885578 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | |||||||| || || Sbjct 6885577 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCTACCTCGAGGGT 6885519 Query 104521 AATAGTCTTACCAGTAA 104537 || ||||| || |||| Sbjct 6885518 GATGGTCTTGCCGGTAA 6885502 Score = 118 bits (130), Expect = 2e-21 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||||||||| | || || || || || || || || || || Sbjct 13657104 GTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCT 13657045 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || ||||| || || || ||||||||||| || ||||| Sbjct 13657044 GCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATTTTAGCTTTC 13656985 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| |||| ||| || ||| ||| || || | || || || || || ||||| Sbjct 13656984 ACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGGTTTTGCCGGTAAGG 13656928 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| Sbjct 13656927 GTCTTGACAAAGATTTGCAT 13656908 Score = 116 bits (128), Expect = 9e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || || || | || || ||||| || ||||| || || Sbjct 13774685 ATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCT 13774626 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 13774625 GCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGG 13774566 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || |||||||||||||| || ||||| || | || || || | || Sbjct 13774565 GGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTC-AGAGCTCTC 13774507 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||| || ||||| || || || || || ||||| |||||||| Sbjct 13774506 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 116 bits (128), Expect = 9e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || || | || ||||| || |||||||| |||||| || || Sbjct 13841995 AGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACAAGGGTGTGT 13842054 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || ||||||||||| ||||| ||||| || || || || ||||| Sbjct 13842055 CCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCC 13842114 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || || || || || ||||| ||||| || | ||| || ||| ||| ||||| || Sbjct 13842115 TTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCAACCTCAAGG 13842171 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || || || |||||||| Sbjct 13842172 GTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 13842212 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| |||| ||| | || || || || ||||| || || ||| Sbjct 13656681 ATGCCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 13656622 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || |||||||| || || ||||| || || || Sbjct 13656621 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 13656562 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||||||||| || || || || | ||| || | || Sbjct 13656561 GGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCA 13656502 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || || || ||||| || || || ||||| || ||||| Sbjct 13656501 ACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 113 bits (124), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || | ||| | || || || ||||| || || || || Sbjct 13775141 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCT 13775082 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || ||||| || || || || ||||| ||||| || |||||||| || || || Sbjct 13775081 GCCAGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 13775022 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || |||||||| |||||||||||||| || ||||| || | || || ||| | Sbjct 13775021 GGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCT---T 13774965 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | |||||||| || || || | || || ||||| || |||||| Sbjct 13774964 TCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 13774911 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| || || || |||| || |||| || || Sbjct 183765 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCCATC 183706 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || || | ||| || || || || ||||| || || || Sbjct 183705 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 183646 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || || || || | ||| || || || ||||| || || ||||| Sbjct 183645 CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 183586 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| || || || ||||| Sbjct 183585 CTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 107 bits (118), Expect = 4e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| || | || || || || |||||||||||||||| || || || || || Sbjct 13841316 AAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCCATC 13841375 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || |||||||| | ||| ||||| || || || || || || || || Sbjct 13841376 CTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTTGTC 13841435 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 ||||| || ||||| ||||| || | ||| || ||| ||| || || | | || Sbjct 13841436 TTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCGACTTCCACAATGAT 13841492 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| || || ||||| || ||||| Sbjct 13841493 GGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 13841528 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | |||||||| || | ||||| ||||||| | | | Sbjct 13841767 AGCCTGAGCACCAGGTGAAGAGTAGATTCCTTTTAGATATTGTAGTCAGCCAAGGCACGG 13841826 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || |||||||| || || ||||| || || || || || |||||| Sbjct 13841827 CCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCT 13841886 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||||| || |||||||| || || || || | ||| || | || ||||| | || Sbjct 13841887 TTATCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAAAACTCTCAACCTCCAAGGTT 13841946 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || | || || || ||||| || ||||| Sbjct 13841947 ATGGTTTTCGCAATGAGAGTCTTCACAAAGATTTGCAT 13841984 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || | ||| | || || || | || || ||||| || |||||||| || | Sbjct 9477436 TTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTG 9477495 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || |||| ||| ||||| | || || ||||||||||| || ||||| ||||| |||| Sbjct 9477496 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAG 9477555 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| || ||||||| Sbjct 9477556 GGATGCCTTCCTTGTCCTGAA 9477576 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || || | ||||| || || || || || || |||||||| || Sbjct 13841112 TCCTTCTGAATGTTGTAATTTATAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAAT 13841171 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || ||||| || || || |||| || | || || ||||||||||| ||||| ||||| Sbjct 13841172 ATGAGCCTTTGCTGGTCCAGAGGGATGC--TCCTTGTCCTGAATCTTAGCTTTCACATTG 13841229 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| | |||||||| | ||| || ||||| | || | ||||| ||| Sbjct 13841230 TCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCTTGTCAACGTTTTGACA 13841289 Query 104549 AATATCTGCAT 104559 | || ||||| Sbjct 13841290 ATGATTTGCAT 13841300 >seq5 Length=29328693 Score = 136 bits (150), Expect = 9e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||||| || || | Sbjct 19804421 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGG 19804362 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || |||||||||||||| ||||| || || || Sbjct 19804361 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 19804302 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | || ||||| || || Sbjct 19804301 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGGGT 19804243 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557 | ||||| || ||||| || || ||||| |||||| Sbjct 19804242 GACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGC 19804206 Score = 113 bits (124), Expect = 1e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | |||||| || ||||| || ||||| || | ||||| | || || Sbjct 21080834 AAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATC 21080893 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || ||||| || || |||||||| || || || || || || || || || Sbjct 21080894 CTCCAACTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21080953 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| || || || || || | ||| ||| || | || ||||| || || || | Sbjct 21080954 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG-AGCTCTCCACCTCGAGGGTGATGG 21081012 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || ||||| || ||||||||||| Sbjct 21081013 TCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 21081046 >seq6 Length=38222195 Score = 118 bits (130), Expect = 2e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || ||||| | | || | ||||| || || || ||||| || || | Sbjct 22063131 CTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGA 22063072 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | ||| ||||||||||| || ||||| || || || ||||| || || ||||| | Sbjct 22063071 TGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGT 22063012 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||| ||||| || ||||| || || || ||||| || || || ||||| || | Sbjct 22063011 CGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 22062952 Query 104550 ATATCTGCATTTT 104562 |||||||||| || Sbjct 22062951 ATATCTGCATCTT 22062939 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | ||||| || | || || || || || || || || || | Sbjct 19321996 TTCCACCCCTCAGCCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 19322055 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || ||||| | ||| || || |||||||| | |||||||||||||||| Sbjct 19322056 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 19322115 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| |||||||||| Sbjct 19322116 GGATGCCTTCCTTATCCTGAA 19322136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151353435013984