Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-19 >seq4 Length=23292877 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 |||||| |||||| | || || ||||| | || || || | ||||| || || | || Sbjct 15563503 AAACAATATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGA 15563444 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | || |||||||| | |||||| ||||| ||||||||||| || ||||| Sbjct 15563443 GAGTAGTGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCC 15563384 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 |||||||| ||||| || | | ||||| ||||| ||||||| |||| | || Sbjct 15563383 AGATCAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGA 15563324 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| ||||| || || ||| | || ||||| |||| || || ||||||| Sbjct 15563323 TTACAACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTGAGGCTCAGGGGAGGAA 15563268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478644162962560