Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2840 131 1e-25 seq1029 131 1e-25 seq970 131 1e-25 seq299 131 1e-25 seq2681 125 5e-24 seq869 125 5e-24 seq6 122 6e-23 seq3 113 3e-20 seq2 107 1e-18 seq577 104 2e-17 seq4 102 5e-17 seq2627 93.3 3e-14 seq1016 93.3 3e-14 seq921 93.3 3e-14 seq885 93.3 3e-14 seq875 93.3 3e-14 seq827 93.3 3e-14 seq751 93.3 3e-14 seq605 93.3 3e-14 seq1 82.4 5e-11 >seq2840 Length=1631 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1348 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1407 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1408 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1442 >seq1029 Length=1030 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 17 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 76 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 77 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 111 >seq970 Length=1172 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 811 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 870 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 871 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 905 >seq299 Length=1452 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1372 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1313 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1312 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1278 >seq2681 Length=1070 Score = 125 bits (138), Expect = 5e-24 Identities = 83/92 (90%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||||||||||||||||||||| ||||||||| |||| || ||||||||||| Sbjct 1070 CCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAA 1011 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||||||||| Sbjct 1010 TCCATTCATGCGCGTCACTAATTAGATGACGA 979 >seq869 Length=1117 Score = 125 bits (138), Expect = 5e-24 Identities = 86/96 (90%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1089 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1030 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGA-TGACGA 25991 |||||| |||||||||||||||||||||| |||||| Sbjct 1029 TAATCCATTCATGCGCGTCACTAATTAGATTGACGA 994 >seq6 Length=38222195 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 || |||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 32780693 AAACCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 32780752 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| |||||||||||||||||||| Sbjct 32780753 TAATCCATTCATGCACGTCACTAATTAGATGACGA 32780787 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| || | ||| | ||||| || ||||| |||||| || || ||||| || | Sbjct 34538179 TACCACCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGG 34538238 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| || |||| || | || |||||||| || || || | || || |||| | Sbjct 34538239 CCAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAG 34538298 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || |||||| || || ||| || || | || || || || |||| Sbjct 34538299 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAA 34538358 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 | || | || || || || || |||| |||||||||||| ||||||||| || Sbjct 34538359 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATGATT 34538411 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 32786711 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 32786770 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 32786771 GCCCGTATTTAGCCTT 32786786 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/195 (70%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || ||||| || | ||| || |||| || | || |||||||| || Sbjct 22063132 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 22063073 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || || || ||||| | |||| |||||| ||||| || || ||| ||||| Sbjct 22063072 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22063013 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || || || | || || || || | || || || || ||||| | |||||||||| Sbjct 22063012 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 22062953 Query 38307 AATATCTGCATGTTT 38321 ||||||||||| ||| Sbjct 22062952 AATATCTGCATCTTT 22062938 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| ||||| ||| |||||| || ||||||||||||| Sbjct 34537267 ACCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGC 34537326 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || ||| | || || | || || || ||||| || | | || || || | || Sbjct 34537327 CAGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGG 34537386 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| || ||| || || || ||||| | || |||||| ||| || || Sbjct 34537387 GATACCTTCCTTATCCTGGATCTTGGCTTTGACATTATCGATGGTATCTGAACTCTCCAC 34537446 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || ||||| || ||||| || |||||||| Sbjct 34537447 CTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34537494 >seq3 Length=27879571 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||||||| ||||| |||||| || || |||||||| | | Sbjct 13775138 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 13775079 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | || || | || ||||| ||||| || || | || || || | ||| Sbjct 13775078 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 13775019 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||||| ||| ||| ||| ||||| | | || ||| ||||| ||| Sbjct 13775018 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACT 13774959 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||||||||| || ||||| || ||||| || || ||||| Sbjct 13774958 TCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 13774912 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | |||||||||||| |||||||| ||||| ||||||||||| || | Sbjct 13656906 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCA 13656847 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || |||| ||||| || ||||| || || | || || || | || Sbjct 13656846 AGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 13656787 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| ||||||||| ||| ||| ||| ||||| | | |||||| ||||||||| Sbjct 13656786 ATGCCCTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACC 13656727 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || || || || || | ||| || || || || |||||| Sbjct 13656726 TCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 13656679 Score = 102 bits (112), Expect = 5e-17 Identities = 163/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | ||| | ||||| || || ||| ||| ||||| |||||||||| Sbjct 13774686 CATT-CCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAAT 13774628 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | ||| | || |||| ||||| |||||||| || || | || ||||| | Sbjct 13774627 CTGCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTG 13774568 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| ||| || |||||| ||| ||| ||| ||||| | || || || || | Sbjct 13774567 GGGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCT 13774508 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || ||||| || || || || || | || || || || ||||||||| Sbjct 13774507 CAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 13774455 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||| |||||||| ||| |||||||||||| |||||||||| | Sbjct 13656678 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 13656619 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || || || ||||| || || | || || || | ||| Sbjct 13656618 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 13656559 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || ||||| ||| ||| ||| |||||| || | | || || ||| ||||| Sbjct 13656558 ATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACC 13656499 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || ||||| || || | || ||||| || || |||||| Sbjct 13656498 TCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCATG 13656451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | |||||||||||| |||||||| ||||| || || |||||||| | Sbjct 13841530 CCACCACAAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCA 13841589 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | || |||| ||||| || ||||| || || | || || || | || Sbjct 13841590 AGAGTGTGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 13841649 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||| ||| ||| ||||| | | ||||| ||| ||||| Sbjct 13841650 ATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTCTCAACC 13841709 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || || ||||| || | ||| || || || || |||||| Sbjct 13841710 TCCAAAGTGATTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCATG 13841757 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||||||||| ||| ||||| || || ||||| || | Sbjct 184237 TACCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTG 184178 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || ||| | || || | || ||||||||||| || || | || || || | | Sbjct 184177 CCAGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTG 184118 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || |||||| || || ||| ||||| | | || || || || | Sbjct 184117 GGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCA 184058 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || |||||||| || ||||| |||||||| Sbjct 184057 CCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 184009 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| || ||||||||||||||||||||| | | | || | || || | || Sbjct 13775342 TGAAGGGTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGC 13775283 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || |||||||| || | || || || | || | ||| || |||||| ||| ||| Sbjct 13775282 TTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTT 13775223 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 |||||||| | | ||||| ||| || || || || || || || || || || Sbjct 13775222 GCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTG 13775163 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | ||| ||||| || |||||||| Sbjct 13775162 AGGGTCTTCACAAAGATCTGCAT 13775140 >seq2 Length=33308843 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||||||| ||||| ||| || ||||| |||||||| | | Sbjct 6938605 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 6938664 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| || | || ||||| ||||| || || | || || || | ||| Sbjct 6938665 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 6938724 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||||| ||| ||| ||| || || | | || ||| ||||| ||| Sbjct 6938725 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACT 6938784 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| ||||| || ||||| || ||||| || || ||||| Sbjct 6938785 TCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCAT 6938831 Score = 107 bits (118), Expect = 1e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | || ||| | ||||| |||||||| ||||||||| |||||||||| Sbjct 6939057 CATT-CCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAAT 6939115 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | || | || |||| ||||| |||||||| || || | || ||||| | Sbjct 6939116 CGGCAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTG 6939175 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | ||| || |||||| || ||| ||| ||||| | || ||||| ||| | Sbjct 6939176 GGGGTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTCT 6939235 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || ||||| || || || || || | || || || || ||||||||| Sbjct 6939236 CAACCTC-AATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 6939287 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/232 (68%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | || ||| | ||||| || | || ||||||||||| ||||| | Sbjct 6938829 CATT-CCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGT 6938887 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | | | | |||| || || ||||| || ||||| || || | || ||||| | Sbjct 6938888 CTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTG 6938947 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| || || |||||| |||||| ||| ||||| | | ||||| |||| Sbjct 6938948 GGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGTATCGGAGCTTT 6939007 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || || | || || || || |||||||| Sbjct 6939008 CCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 6939059 >seq577 Length=1222 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 987 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 928 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 927 GCCAATATTTAGCTTTA 911 >seq4 Length=23292877 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG-- 38162 |||||||| |||||||| ||||||||| || |||||||| | ||| | |||| Sbjct 15563284 CAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG-CAAGA---GTTCTGC 15563339 Query 38163 --TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTT 38220 || || | ||| || || ||||| || || | |||||||| | |||| |||||||| Sbjct 15563340 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGGATGCCTTCTT 15563399 Query 38221 TGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAA 38280 ||||| || || || ||||| | || ||||| | ||| || || || | || | Sbjct 15563400 TGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCTCGACCTCAATAGTGA 15563459 Query 38281 TAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || || || |||| ||||||||||| || ||||| || Sbjct 15563460 TGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATT 15563499 >seq2627 Length=1325 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 360 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 419 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 420 GCCCGTATTTAGCCTT 435 >seq1016 Length=1029 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 67 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 126 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 127 GCCCGTATTTAGCCTT 142 >seq921 Length=1076 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 525 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 466 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 465 GCCCGTATTTAGCCTT 450 >seq885 Length=1083 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 839 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 898 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 899 GCCCGTATTTAGCCTT 914 >seq875 Length=1146 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 1022 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 963 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 962 GCCCGTATTTAGCCTT 947 >seq827 Length=1081 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 405 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 346 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 345 GCCCGTATTTAGCCTT 330 >seq751 Length=1081 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 401 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 342 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 341 GCCCGTATTTAGCCTT 326 >seq605 Length=1348 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 515 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 456 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 455 GCCCGTATTTAGCCTT 440 >seq1 Length=22681039 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||| || ||||| |||||| || || ||||| || | | | || |||| || Sbjct 22555150 CACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTC 22555209 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | ||||||||||| || || ||||| || || || | |||| ||| || ||||| Sbjct 22555210 GAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTG 22555269 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || || ||||||||| | || || || || || || || || || || || Sbjct 22555270 GATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTT 22555329 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||| | |||||||||||| |||||||| || Sbjct 22555330 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 22555362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334934757548888