Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 131 1e-25 seq3 120 3e-22 seq6 113 4e-20 seq4 104 2e-17 seq5 82.4 7e-11 >seq2 Length=33308843 Score = 131 bits (144), Expect = 1e-25 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| |||||||||||||| ||| |||| || | |||||||| || Sbjct 6938832 AATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTC 6938773 Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || | ||| |||| | ||| ||||||||||| ||||| || ||| Sbjct 6938772 AGACACAATTGA-TAACGTCAAGGCAAAGATTCAG-GACAAAGAAGGCATTCCCCCAGAC 6938715 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||| ||||| || || || | || || | | || ||| |||||| Sbjct 6938714 CAGCAGAGGCTTATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTAC 6938655 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| || || || ||||| ||||| Sbjct 6938654 AACATTCAGAAAGAGTCGACTCTGCATTTGGTGCT 6938620 Score = 109 bits (120), Expect = 5e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || || |||||||| | || || ||| ||| Sbjct 6939286 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATT-GAGGTTGAGAGTTCT 6939228 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| ||| ||| ||||| || || || || || || || Sbjct 6939227 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 6939168 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||||||||| |||| |||| ||||| | | |||||||||| Sbjct 6939167 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 6939108 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || | ||||| Sbjct 6939107 ATCCAAAAGGAGTCTACTCTTCACCTGGTGCT 6939076 >seq3 Length=27879571 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || ||| |||| || | || || ||| ||| Sbjct 13656452 ATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTCT 13656511 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| |||| | ||| || ||||| || || ||||| ||||| Sbjct 13656512 GACACCATTGACAACGTGAAGGCAAAGATTCAG-GATAAAGAGGGTATCCCACCAGACCA 13656570 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || ||||| || || || | || |||| ||||| ||| |||||||| Sbjct 13656571 GCAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAA 13656630 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || ||||| || ||||||||||| Sbjct 13656631 CATTCAAAAGGAGTCCACCCTTCATTTAGTGCT 13656663 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || || |||||||| | || || ||| ||| Sbjct 13774456 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 13774515 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | ||||| | ||| ||||| || || || || || || Sbjct 13774516 GACACAATCGATAATGTCA---AGGCAAAGATTCAG-GACAAGGAGGGCATCCCCCCAGA 13774571 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | || |||||||||||||| |||| |||| || || | | ||||| Sbjct 13774572 TCAGCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTA 13774631 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| |||||||| ||||| || || | ||||| Sbjct 13774632 CAATATCCAAAAAGAGTCCACCCTCCACCTGGTGCT 13774667 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || ||| | || || | |||||||| || Sbjct 13774911 AATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTC 13774970 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||| || || |||| | ||||| | ||| ||||||||||| ||||| || | Sbjct 13774971 AGACACAATTGATAATGTCA---AGGCAAAGATTCA-GGACAAAGAAGGCATTCCCCCAG 13775026 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| ||| || | || ||||| || || || | || |||| | | || ||| |||| Sbjct 13775027 ACCAGCAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATT 13775086 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || || || || || || ||||| ||||| Sbjct 13775087 ACAACATACAGAAGGAGTCAACTCTGCATTTGGTGCT 13775123 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || || ||| ||| Sbjct 183781 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 183840 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | || || | ||| ||||| ||||| ||||| || || Sbjct 183841 GACACCATTGACAACGTCA---AGGCTAAGATTCA-GGACAAGGAAGGCATTCCCCCAGA 183896 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || |||| |||||||| || || | || |||| ||||| | | || || Sbjct 183897 CCAGCAGAGGCTTATCTTTGCCGGGAAGCAGCTTGAGGATGGCCGCACCCTAGCAGACTA 183956 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || || || || || || ||||| ||||| Sbjct 183957 CAATATCCAGAAGGAGTCTACCCTCCATTTGGTGCT 183992 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || ||| |||||| || ||||| || ||| Sbjct 13841528 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAAACCATCATTGTGGAAGTCGAAAGCTCT 13841469 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || |||| || |||| ||| ||||| || || ||||| || ||||| Sbjct 13841468 GACACCATTGATAATGTGAAAGCTAAAATTCAA-GACAAGGAGGGTATTCCCCCAGACCA 13841410 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| ||||| || | || |||| | || | | || || || Sbjct 13841409 ACAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAA 13841350 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || ||||| || || |||||||| Sbjct 13841349 TATTCAAAAGGAGTCCACTCTGCAATTAGTGCT 13841317 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| || | ||||| | || || || || Sbjct 13656680 ATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACAATCACCTTGGAGGTTGAAAGTTCA 13656739 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | ||||| | ||| |||||||| || ||||| || || Sbjct 13656740 GATACAATTGATAATGTCA---AGGCAAAGATTCAG-GACAAAGAGGGCATTCCTCCAGA 13656795 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | |||||||| || ||||| |||| |||| ||||||| | | || || Sbjct 13656796 CCAGCAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCGCACTCTTGCGGACTA 13656855 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||||||| || ||||| || || || || ||| Sbjct 13656856 CAATATTCAGAAGGAATCAACTCTTCACTTGGTG 13656889 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| ||| ||||||| | |||||||| ||| Sbjct 13656908 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 13656967 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || |||| || |||| ||| || || || || ||||| || ||||| Sbjct 13656968 GACACCATAGATAATGTGAAAGCTAAAATTCAG-GATAAGGAGGGTATTCCTCCAGACCA 13657026 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| || || || | || |||| | || | | || || || Sbjct 13657027 GCAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAA 13657086 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || ||||| || || || ||||| Sbjct 13657087 TATTCAAAAGGAGTCCACTCTGCACTTGGTGCT 13657119 Score = 100 bits (110), Expect = 2e-16 Identities = 161/227 (71%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 ||||| ||||| || || || |||||| | || || || ||||||| | || || || Sbjct 13656218 GAACAGATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTTGAA 13656277 Query 25053 TCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109 |||||||| ||||| || || |||| |||| || || || ||||| ||||| Sbjct 13656278 AGCTCTGACACCATCGA--CAATGTCAAAGCCAAAATCCAA-GATAAGGAAGGCATTCCC 13656334 Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169 || ||||| || | | |||||||| || || || | || |||| ||||| | | Sbjct 13656335 CCAGACCAGCAAAGACTGATTTTTGCTGGAAAGCAGCTCGAGGATGGACGCACCCTTGCT 13656394 Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || |||||||||||||| ||||| || ||||| | ||||| || || Sbjct 13656395 GACTACAATATTCAAAAGGAATCGACTCTACACCTGGTGCTCAGACT 13656441 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || |||||| || Sbjct 184237 ATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 184296 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| || ||||||||||| ||||| Sbjct 184297 GACACCATTGACAATGTGAAGGCCAAGATTCAA-GACAAGGAGGGGATTCCACCAGACCA 184355 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||||||||| || | || || | || ||| | | || ||||| Sbjct 184356 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACTCTTGCAGACTACAA 184415 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || || || || Sbjct 184416 TATCCAGAAGGAGTCTACCCTTCA 184439 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 ||||| ||||| || || || |||||| | || || || ||||||| | || || || Sbjct 13842218 GAACATATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTTGAA 13842159 Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108 |||||||| || || |||| |||| |||| ||| ||||| ||||| || || Sbjct 13842158 AGCTCTGACACCATTGATAATGTCA---AAGCCAAAATCCAC-GACAAGGAAGGCATCCC 13842103 Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168 || |||||||| || | |||||||| || || || | || |||| | ||| | | Sbjct 13842102 CCCGGACCAACAAAGGCTGATTTTTGCTGGTAAGCAGCTTGAGGATGGACACACCCTTGT 13842043 Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACA 25201 || |||||||||||||| ||||| || || || Sbjct 13842042 TGACTACAATATTCAAAAGGAATCGACTCTTCA 13842010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || |||| || | || || ||| ||| Sbjct 13775140 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATAACCTTGGAGGTAGAGAGTTCT 13775199 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || |||| ||||| | ||| ||||| || || ||||| || ||||| Sbjct 13775200 GATACAATTGATAATGTGAAAGCAAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 13775258 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || | ||||||| || ||| | | |||||||| Sbjct 13775259 GCAGAGGCTCATATTTGCTGGTAAGCAGCTTGAAGATGGCCGGACTCTAGCAGATTACAA 13775318 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||||||| || || || || || Sbjct 13775319 TATTCAAAAGGAGTCAACCCTTCA 13775342 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/225 (69%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || ||||| || || | || || || | ||||| |||| || || Sbjct 13774223 AACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAA 13774282 Query 25054 CGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||||||||||| || || || ||| ||| ||| ||||| || || || || || Sbjct 13774283 GCTCTGACACTATTGA--CAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCC 13774340 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||| || || | || ||||| ||||| || | || || | || || | | || Sbjct 13774341 AGACCAGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGA 13774400 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||| ||||||||||| ||||| || || | ||||| || || Sbjct 13774401 CTACAACATTCAAAAAGAGTCCACCCTCCACCTGGTGCTTAGACT 13774445 >seq6 Length=38222195 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | ||||| || | ||||| ||||||| ||| || Sbjct 34520048 ATGCAAATCTTCGTGAAGACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAGAGCTCC 34519989 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | ||| || ||| || || |||||||| ||||| || || Sbjct 34519988 GACACGATTGA-TAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCA 34519930 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||| || || || ||||| || |||| | ||| | | |||||||| Sbjct 34519929 GCAGAGGTTGATTTTCGCTGGTAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 34519870 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||| || || || || || || ||||| ||||| ||||| Sbjct 34519869 TATCCAGAAGGAGTCGACTCTGCATTTGGTGCTCAGGCT 34519831 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || |||||| || Sbjct 34537494 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATCACTTTGGAGGTGGAGAGTTCA 34537435 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || ||||| |||| |||| || | || || || ||||| || ||||| || Sbjct 34537434 GATACCATCGATAATGTCA---AAGCCAAGATCCAG-GATAAGGAAGGTATCCCACCGGA 34537379 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || ||||| || || || | || |||| ||| || ||| ||||| Sbjct 34537378 CCAGCAGAGGTTGATCTTTGCAGGGAAGCAGCTCGAGGATGGTCGTACCCTGGCTGATTA 34537319 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || || || ||||| || || || || || Sbjct 34537318 CAATATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 34537283 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || || ||| || Sbjct 34519820 ATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTCG 34519761 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| || | || || || |||||||| ||||| || Sbjct 34519760 GATACCATTGATAATGTCA---AAGCCAAGATCCAG-GATAAGGAAGGGATCCCACCGGA 34519705 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | || ||||||||||| || | || || | ||| || ||| ||||| Sbjct 34519704 CCAGCAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTA 34519645 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| ||||| || || ||||| || || || || || Sbjct 34519644 CAACATTCAGAAGGAGTCCACCCTTCACTTGGTCCT 34519609 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||| || | || || ||| || Sbjct 34537722 ATGCAGATTTTTGTGAAGACTTTGACAGGGAAGACCATTACCCTGGAGGTTGAGAGCTCC 34537663 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | || | ||| || ||| || || |||||||| ||||| || || Sbjct 34537662 GATACAATTGA-TAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCA 34537604 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || ||||| || |||| | ||| | | |||||||| Sbjct 34537603 GCAGAGGTTGATCTTCGCTGGAAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 34537544 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||| || || || ||||| || || || ||||| ||||| Sbjct 34537543 TATCCAGAAGGAGTCCACCCTGCACTTGGTGCTCAGGCT 34537505 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| || | ||||| |||| || ||| ||| Sbjct 34520276 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 34520217 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 34520216 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 34520157 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || ||||| || || || || |||| || ||| ||| |||||||||| Sbjct 34520156 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAAT 34520097 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || ||||| ||||| Sbjct 34520096 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCT 34520065 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 || || ||||| || || ||||| |||||| | | ||||||||||| || ||||| ||| Sbjct 19322131 GATAAGGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCCGGTAAGCAATTGGAA 19322072 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| | ||| | | |||||||| || ||||| || || || || || |||| || Sbjct 19322071 GATGGAAGAACTCTTGCAGATTACAACATCCAAAAGGAGTCAACTCTTCACCTAGTTTTA 19322012 Query 25212 AGGCTAAGAGGAGGAA 25227 ||||| || || |||| Sbjct 19322011 AGGCTGAGGGGTGGAA 19321996 >seq4 Length=23292877 Score = 104 bits (114), Expect = 2e-17 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| ||||||| || ||||||| | || || ||| | Sbjct 15563496 ATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGTAGT 15563437 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || |||| || | || ||||||||||| || || || || Sbjct 15563436 GATACCATCGA--CAATGTCAAAGCCAAGATCCAG-GACAAAGAAGGCATCCCTCCAGAT 15563380 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | | || ||||| ||||| ||| | ||||||| | ||| | | |||||| Sbjct 15563379 CAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTAC 15563320 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || ||||| || || || || || | ||| | ||||| || ||||||| Sbjct 15563319 AACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTGAGGCTCAGGGGAGGAA 15563268 >seq5 Length=29328693 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || |||||| || Sbjct 19804432 ATGCAGATTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTGGAGGTGGAGAGCTCC 19804491 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || |||| || ||| || || || || || || || || Sbjct 19804492 GATACCATTGA--CAATGTCAAAGCCAAGGTTCA-AGATAAGGAGGGTATCCCGCCGGAT 19804548 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || ||||| || || || || |||| ||| ||| ||| |||||| Sbjct 19804549 CAGCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTAT 19804608 Query 25176 AATATTCAAAAAGAATC 25192 ||||| || || || || Sbjct 19804609 AATATCCAGAAGGAGTC 19804625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433311902948120