Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq6 125 6e-24 seq2 125 6e-24 seq5 116 3e-21 seq4 107 2e-18 seq1 105 6e-18 >seq3 Length=27879571 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || ||||| | ||||| || || |||| ||||| ||||| | Sbjct 183551 AGATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTT 183610 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | | || || ||||| ||||||||||| || || || || | Sbjct 183611 CTGACACCATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACC 183670 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || ||||| ||||| ||| | |||||| ||| ||| | | ||||||| Sbjct 183671 AGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGATTACA 183730 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || || || ||| | ||||| || | || |||| || ||| Sbjct 183731 ACATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTCTGCGTGGTGGT 183780 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || ||||| ||| | | ||||| |||| | | Sbjct 13841528 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAAACCATCATTGTGGAAGTCGAAAGCTCT 13841469 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| |||||||||||||||||||||||||| || || ||| Sbjct 13841468 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAA 13841409 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| ||||| ||| | |||||| | || | | || || || Sbjct 13841408 CAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAAT 13841349 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || ||||| | || ||||||| ||| Sbjct 13841348 ATTCAAAAGGAGTCCACTCTGCAATTAGTGCTTCGTCTGCGCGGTGGT 13841301 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || | |||||||| || ||||| | || || || | || Sbjct 13841756 ATGCAAATCTTTGTTAAGACCCTCACCGGTAAGACAATCACTTTGGAGGTTGAGAGTTCC 13841697 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||| ||||| ||||||||||| ||||| || || || Sbjct 13841696 GATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 13841637 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || |||||| |||||||| | ||| | | ||||||||| Sbjct 13841636 CAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCACACTCTTGCAGATTACAAC 13841577 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || ||||| || | || || || ||||| Sbjct 13841576 ATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCG 13841542 Score = 118 bits (130), Expect = 9e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| ||||| | || || || || |||| || || || |||| | Sbjct 13774226 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCT 13774285 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| || |||| ||| || |||||||||||||| || || || || | Sbjct 13774286 CTGACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACC 13774345 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||| | || || ||||| ||||| ||| | ||||| ||| || | | || |||| Sbjct 13774346 AGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACA 13774405 Query 22397 ACATTCAAAAAGAATCCACC 22416 ||||||||||||| |||||| Sbjct 13774406 ACATTCAAAAAGAGTCCACC 13774425 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || || || |||| | || || || | | | Sbjct 13774456 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 13774515 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||| ||||| ||||||||||| || || || ||||| Sbjct 13774516 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 13774575 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||||||| |||||||| ||| || || | |||||||| Sbjct 13774576 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTACAAT 13774635 Query 22399 ATTCAAAAAGAATCCACC 22416 || |||||||| |||||| Sbjct 13774636 ATCCAAAAAGAGTCCACC 13774653 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | || ||||| | | | Sbjct 184009 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCTTGGAGGTGGAGAGCTCT 184068 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || |||||||||||||| ||||| || || Sbjct 184069 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 184128 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| |||||||| || ||| | |||||| ||| ||| | | || |||||| Sbjct 184129 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGACTACAAC 184188 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || ||||||||| | ||||| || Sbjct 184189 ATCCAGAAGGAATCCACCCTTCATTTGGT 184217 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || ||||| | || | || || || | | Sbjct 13656452 ATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTCT 13656511 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| ||||| || || |||||||| ||||| || || Sbjct 13656512 GACACCATTGACAACGTGAAGGCAAAGATTCAGGATAAAGAGGGTATCCCACCAGACCAG 13656571 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | |||||| ||||||| | | ||||||||| Sbjct 13656572 CAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAAC 13656631 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || |||||| | |||||||| Sbjct 13656632 ATTCAAAAGGAGTCCACCCTTCATTTAGT 13656660 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || |||| | || ||||||| | | Sbjct 13774684 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACAATCACATTGGAGGTGGAAAGCTCT 13774743 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | ||| ||| || || ||||||||||||||||| || ||||| Sbjct 13774744 GATACAATTGACAATGTTAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 13774803 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || |||||||| ||||| | || | | || |||||| Sbjct 13774804 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 13774863 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| || | || || ||| | || |||| || || Sbjct 13774864 ATTCAAAAGGAATCAACATTGCACTTGGTTCTCCGTCTGCGTGGTGG 13774910 Score = 113 bits (124), Expect = 4e-20 Identities = 163/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTA-ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||| ||||||| || ||||| || | || || |||| || || || || | | | Sbjct 6885708 ATGCAGGTTTTTGTGAAGACTTTTGACTTGCAAGACCATCACCCTCGAGGTAGAGAGCTC 6885767 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| || |||||| || |||||||| ||||||||||| || || ||||| Sbjct 6885768 TGATACCATTGACAATGTCAAACCCAAGATTCAAGATAAGGAGGGTATCCCGCCGGATCA 6885827 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | | || || ||||| || ||||| |||||| || || | ||||||| || Sbjct 6885828 GCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAA 6885887 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| |||| | | || | ||| |||| | || || ||| Sbjct 6885888 TATCCAGAAAGAGTCCAACCTGCACCTTGTTCTGCGTCTCCGTGGTGGT 6885936 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| ||||| ||||| | |||||||||| | | Sbjct 13656908 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 13656967 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| |||||||| || |||||||||||||| || || || Sbjct 13656968 GACACCATAGATAATGTGAAAGCTAAAATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 13657027 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||| | |||||| | || | | || || || Sbjct 13657028 CAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAAT 13657087 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || || || | || ||||||| ||| Sbjct 13657088 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCGGTGGT 13657135 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | || || || || |||| ||||| ||||| | | | Sbjct 184237 ATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 184296 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||||||||||||||| |||||||| || || Sbjct 184297 GACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAG 184356 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||||||||| ||| | ||||| || || | | || ||||| Sbjct 184357 CAGAGGCTTATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACTCTTGCAGACTACAAT 184416 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 184417 ATCCAGAAGGAGTCTACC 184434 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || ||||| | ||| | |||||||||| | | Sbjct 13774912 ATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTCA 13774971 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||| ||||| ||||| || || ||||| || || || Sbjct 13774972 GACACAATTGATAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 13775031 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | |||||| | || | | ||||||||| Sbjct 13775032 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATTACAAC 13775091 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || || || | ||||| || Sbjct 13775092 ATACAGAAGGAGTCAACTCTGCATTTGGT 13775120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 22240 TTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAA 22299 || ||||| || || |||| || || || || | | |||| ||| | ||| | ||||| Sbjct 6885501 TTTACCGGCAAGACCATCACCCTCGAGGTAGAGAGCTCCGACACCATCGACAACGTCAAA 6885560 Query 22300 CAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGC 22359 || || || ||||||||||| || || || || ||||| | || || |||||||| Sbjct 6885561 GCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAACAGAGGCTCATCTTTGCCGGA 6885620 Query 22360 AAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || ||| | ||||| ||| ||| || | || ||||| || || || || || || Sbjct 6885621 AAGCAGCTCGAGGACGGCCGGACCCTCGCAGACTACAATATCCAGAAGGAGTCGAC 6885676 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || | || | || || || | | Sbjct 13775139 GATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATAACCTTGGAGGTAGAGAGTTC 13775198 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| ||| ||||| ||||||||||| ||||| || || || Sbjct 13775199 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 13775258 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || |||||||| || || ||| | || ||| ||| || | | |||||||| Sbjct 13775259 GCAGAGGCTCATATTTGCTGGTAAGCAGCTTGAAGATGGCCGGACTCTAGCAGATTACAA 13775318 Query 22398 CATTCAAAAAGAATCCACC 22416 |||||||| || || ||| Sbjct 13775319 TATTCAAAAGGAGTCAACC 13775337 >seq6 Length=38222195 Score = 125 bits (138), Expect = 6e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| || || || ||||||| || ||||| | Sbjct 22062938 AAAGATGCAGATATTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTGGAGAG 22062997 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || ||| ||| | ||| || |||| || || ||||||||||| || || || || || Sbjct 22062998 CAGCGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGA 22063057 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || || ||||| || ||| | ||||| ||||||| | |||| || Sbjct 22063058 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTA 22063117 Query 22395 CAACATTCAAAAAG 22408 |||||| || |||| Sbjct 22063118 CAACATCCAGAAAG 22063131 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| ||||||| || ||| ||||||| || || || | | | Sbjct 34520276 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 34520217 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 34520216 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 34520157 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || ||||| |||||| ||| || | |||||||||| Sbjct 34520156 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAAT 34520097 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | ||||| || | || | ||||| ||| Sbjct 34520096 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTTCGCGGTGGT 34520049 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| |||||||| || ||||| || || || || ||||| | || || || | | | Sbjct 34519821 GATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTC 34519762 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | || || ||||| || || || || ||||| || || ||||| || || Sbjct 34519761 GGATACCATTGATAATGTCAAAGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGACCA 34519702 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | | || ||||||||||| ||| | ||||| || ||| | | |||||||| Sbjct 34519701 GCAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTACAA 34519642 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||| || || |||||| | || || || Sbjct 34519641 CATTCAGAAGGAGTCCACCCTTCACTTGGT 34519612 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| ||||||| || || |||| || || || || | | || Sbjct 34520504 ATGCAAATTTTTGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCC 34520445 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||||| ||| | |||| || || || ||||||||||| || || || || || Sbjct 34520444 GACACCGTCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 34520385 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| | ||||| ||| ||| || |||| |||||| Sbjct 34520384 CAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAAC 34520325 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 34520324 ATCCAGAAGGAGTCGAC 34520308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| ||||||| || ||| ||||||| || || || | | || Sbjct 34538179 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 34538120 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGG-AGGGTATTCCACCCGATCA 22337 || ||| | ||| | |||| || || || ||||||| | || || || || ||||| Sbjct 34538119 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGGAAGGGATCCCCCCAGATCA 34538060 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || || ||||| || ||| | ||||| | ||| | | |||||||| Sbjct 34538059 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACAA 34538000 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||| || || || || ||| | ||||| || | || | ||||| || Sbjct 34537999 CATCCAGAAGGAGTCAACCCTCCATTTGGTGCTCCGTCTTCGCGGTGG 34537952 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | ||||| || || |||| || || || || | | || Sbjct 34538407 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTCC 34538348 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || ||||| || Sbjct 34538347 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 34538288 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| | ||||| ||| || | |||| |||||| Sbjct 34538287 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGACTACAAC 34538228 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 34538227 ATCCAGAAGGAGTCAAC 34538211 >seq2 Length=33308843 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| ||||| | || || || || |||| ||||| || |||| | Sbjct 6939516 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCT 6939457 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| || ||||| ||| || |||||||||||||| ||||| || || | Sbjct 6939456 CTGACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACC 6939397 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 |||| | || || ||||| ||||| ||| | ||||| || || || | || |||| Sbjct 6939396 GACAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGAATACA 6939337 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||| |||||||| ||||| | || || ||| Sbjct 6939336 ACATCCAAAAAGAGTCCACTCTCCACTTGGTT 6939305 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| | || ||||||| | || Sbjct 6939059 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTCC 6939000 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| |||||| || |||||||||||||| || || ||||| Sbjct 6938999 GATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCAG 6938940 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || |||||||| ||||| | || | | || |||||| Sbjct 6938939 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 6938880 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| ||| | || || ||| | || |||| || || Sbjct 6938879 ATTCAAAAGGAATCTACCTTGCACTTGGTTCTCCGTCTGCGTGGTGG 6938833 Score = 118 bits (130), Expect = 9e-22 Identities = 145/197 (74%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||| | || || || || |||| |||| || || | | Sbjct 6939286 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACA-TTGAGGTTGAGAGTTCT 6939228 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||| || || ||||||||||| || || || ||||| Sbjct 6939227 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 6939168 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||||||| |||||||| ||||||| | |||||||||| Sbjct 6939167 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 6939108 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 6939107 ATCCAAAAGGAGTCTAC 6939091 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| ||||| ||||| | ||| | |||||||||| | | Sbjct 6938831 ATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTCA 6938772 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| ||||| ||||| || || ||||| || || || Sbjct 6938771 GACACAATTGATAACGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 6938712 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || || ||| | ||||| | | || | | ||||||||| Sbjct 6938711 CAGAGGCTTATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTACAAC 6938652 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| ||||| || || | ||||| || Sbjct 6938651 ATTCAGAAAGAGTCGACTCTGCATTTGGT 6938623 >seq5 Length=29328693 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| || || || || |||| || || ||||| | | || Sbjct 19804432 ATGCAGATTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTGGAGGTGGAGAGCTCC 19804491 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || ||||| || ||||||| ||||||||||| || || ||||| Sbjct 19804492 GATACCATTGACAATGTCAAAGCCAAGGTTCAAGATAAGGAGGGTATCCCGCCGGATCAG 19804551 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || ||||| |||||| || || | ||||||| || Sbjct 19804552 CAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAAT 19804611 Query 22399 ATTCAAAAAGAATC 22412 || || || || || Sbjct 19804612 ATCCAGAAGGAGTC 19804625 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280 ||| || ||||| || || | ||||| || || ||||| || || ||||| | | |||| Sbjct 19804206 GCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTCCGA 19804265 Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340 ||| | ||| | ||||| || || || ||||||||||| || || || |||||||| Sbjct 19804266 CACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCAACA 19804325 Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400 | || || |||||||| || ||| | ||||| ||| ||| || | || ||||| || Sbjct 19804326 GAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAATAT 19804385 Query 22401 TCAAAAAGAATCCAC 22415 || || || || || Sbjct 19804386 CCAGAAGGAGTCGAC 19804400 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| |||| || || || |||| || || ||||| | | || Sbjct 21081046 ATGCAGATATTCGTGAAAACCCTAACGGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 21080987 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 21080986 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 21080927 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||| ||||| |||||| |||||| || | ||||| ||| Sbjct 21080926 CAGAGGCTCATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACTCTCGCAGATTATAAC 21080867 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 21080866 ATCCAGAAGGAGTCTAC 21080850 >seq4 Length=23292877 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| |||| || || || |||| || || ||||| || || Sbjct 18773194 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCCTCC 18773253 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 18773254 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 18773313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| || |||| |||||| Sbjct 18773314 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 18773373 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 18773374 ATCCAGAAGGAGTCGAC 18773390 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| || |||||| | ||||| || || ||||| |||| || || | Sbjct 15563499 AATATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGT 15563440 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| || ||||| || || || ||||| || || || || || ||| Sbjct 15563439 AGTGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCCAGAT 15563380 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | || || ||||| ||||| || | || ||| | | || | | |||||| Sbjct 15563379 CAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTAC 15563320 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| ||||| || || || Sbjct 15563319 AACATCCAAAAGGAGTCGAC 15563300 >seq1 Length=22681039 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || |||||||| || || || ||||| |||| || || ||| |||| | || ||||| Sbjct 22555365 GTCAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAG 22555306 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 || |||| ||| | || || | || || || |||||||||||||| || || || Sbjct 22555305 TCCTCCGACACCATCGATAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCG 22555246 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || || || || || ||||| |||||| | ||||| ||| || || |||| Sbjct 22555245 GACCAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGAC 22555186 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || || || || || Sbjct 22555185 TACAACATCCAGAAGGAGTCGAC 22555163 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| |||| || || ||| |||| | || ||||| || Sbjct 22583380 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 22583321 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || | || || || |||||||||||||| || || | || Sbjct 22583320 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCTGGAC 22583261 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||| ||||| || | ||| ||| || | ||||| ||| || || ||| ||| Sbjct 22583260 CAGCAACGCCTTATCTTCGTCGGAAAATAGCTCGAGGACGGCCGGACTCTCGCCGTCTAC 22583201 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 22583200 AACATCCAGAAGGAGTCGAC 22583181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419712408154120