Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 131 4e-25 seq4 131 4e-25 seq3 131 4e-25 seq1 125 2e-23 seq5 111 4e-19 seq2 111 4e-19 >seq6 Length=38222195 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| || |||||||| | ||||| ||||| || | || ||||| ||||||| Sbjct 22063131 CTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGA 22063072 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | |||||||| ||| | ||||| ||||| || || ||||| || || || || || | Sbjct 22063071 TGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGT 22063012 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | || | ||||| || || ||||| ||||| |||||||| || || || || |||| Sbjct 22063011 CGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 22062952 Query 288464 ATATCTGCAT 288473 |||||||||| Sbjct 22062951 ATATCTGCAT 22062942 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | ||| | || || || |||||||| || || || Sbjct 34519822 CCACCACGAAGCCTGAGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCA 34519881 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || ||||| || || ||||| |||| | ||| ||| |||| Sbjct 34519882 AGAGTCCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGG 34519941 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | || |||| || Sbjct 34519942 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTC---TCA 34519998 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||||||||| |||||||| ||||| || ||||| Sbjct 34519999 ACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 34520048 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | ||| | ||| || || |||||||| || ||||| Sbjct 34520050 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 34520109 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || || || |||||||||| | ||| || || ||| Sbjct 34520110 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGG---TCCGGG 34520166 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || |||||||| || || || ||||| || || | ||| |||| Sbjct 34520167 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTC--- 34520223 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||||||||| || || |||||||| |||||||| Sbjct 34520224 TCGACCTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | || | ||| || || |||||||| || || || Sbjct 34537496 CCACCACGAAGCCTGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCA 34537555 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || ||||| ||||| |||||||||| | ||| ||| |||| Sbjct 34537556 AGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 34537615 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | ||| |||| || Sbjct 34537616 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTC---TCA 34537672 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| |||| |||||| || || |||||||| Sbjct 34537673 ACCTCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAAATCTGCAT 34537722 Score = 114 bits (126), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| || || | ||||| || || || || || || ||| Sbjct 34537760 TCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTCCAACTGCTTACCGGCAAAG 34537819 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| ||| || ||| ||||| || ||||||||||| || || || ||| Sbjct 34537820 ATCAATCTCTGCTGA---TCCGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACG 34537876 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || ||||| ||||| ||||||||||| || ||| Sbjct 34537877 TTGTCAATCGTGTCGGAGCTC---TCAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTC 34537933 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| |||||||| Sbjct 34537934 TTCACGAAGATCTGCAT 34537950 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| ||| || || |||||||| || || || Sbjct 34537268 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 34537327 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || ||||| ||||||| | ||| || |||| Sbjct 34537328 AGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34537387 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 || ||||| ||||||||||| || ||||| || || || || | || || | ||| | Sbjct 34537388 ATACCTTCCTTATCCTGGATCTTGGCTTTGACATTATCGATGGTAT--CTGAACTCTCCA 34537445 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || | ||||| ||||| || |||| |||||| || || |||||||| Sbjct 34537446 CCTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34537494 Score = 100 bits (110), Expect = 7e-16 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| || || ||||| || | || ||||| |||||| Sbjct 34520314 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 34520373 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || || || |||||||| || || || ||||| Sbjct 34520374 ATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 34520433 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || | | || |||| || || ||||| ||||| ||||| ||||| || || || Sbjct 34520434 TCGACGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTC 34520490 Query 288460 ACGAATATCTGCATTAT 288476 || || || ||||| || Sbjct 34520491 ACAAAAATTTGCATGAT 34520507 Score = 96.9 bits (106), Expect = 8e-15 Identities = 164/234 (70%), Gaps = 13/234 (6%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | ||| | || || || ||||| || || || || Sbjct 34537952 CCACCGCGAAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCC 34538011 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||||| || | || ||||| |||||||||| | ||| ||| |||||| Sbjct 34538012 AAGGTCCTACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGA---TCTGGG 34538068 Query 288367 ---ATTCCTTCT-TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGA 288419 || ||||| || |||||||| || || || ||||| || || | ||| ||| Sbjct 34538069 GGGATCCCTTCCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC-- 34538126 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| ||||| || || || ||||| |||||||| Sbjct 34538127 -TCGACCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || | |||| ||| || || || || || || || || Sbjct 34519594 CCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 34519653 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || || ||||||| | || || |||| Sbjct 34519654 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGG 34519713 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || ||||| || || || || | ||| |||| || Sbjct 34519714 ATCCCTTCCTTATCCTGGATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCA 34519770 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| |||||| || || |||||||| Sbjct 34519771 ACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 >seq4 Length=23292877 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | || || || ||||| || ||||||||| Sbjct 18773420 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18773361 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 18773360 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 18773301 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | ||| || || || Sbjct 18773300 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 18773241 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 18773240 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18773194 Score = 123 bits (136), Expect = 6e-23 Identities = 150/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || || || || || | || ||||| | ||| || || || ||| Sbjct 15563306 TCCTTTTGGATGTTGTAATCCGCAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAG 15563365 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||||||| ||||| ||| |||||||| |||||||| || ||||| || Sbjct 15563366 ATCAGTCTCTGTTGA---TCTGGAGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACA 15563422 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || | ||||| ||||||||||||||||| || Sbjct 15563423 TTGTCGATGGTATCACTACTCTCGACCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTC 15563482 Query 288460 ACGAATATCTGCATTATGTTATT 288482 ||||| || ||||| |||| || Sbjct 15563483 ACGAAAATTTGCATATTGTTTTT 15563505 >seq3 Length=27879571 Score = 131 bits (144), Expect = 4e-25 Identities = 174/238 (73%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||||||||| || || || || | || ||| ||||| ||||| |||| Sbjct 13656454 CATG-CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGT 13656396 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || |||||||| || || | || ||||| || || ||||| | || || | Sbjct 13656395 CAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTG---GT 13656339 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| ||||| |||||||| ||||| || || || || | || || Sbjct 13656338 CTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGC 13656279 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || || || ||||| ||||| || || |||||||| ||||| |||||||| Sbjct 13656278 T---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 13656224 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||||||||| || || || |||| || ||| ||||| ||||| ||||| | Sbjct 13841986 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACA 13842045 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||| |||| || || | || || || || || ||||| | ||||| ||| Sbjct 13842046 AGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGG 13842105 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || || |||||||| ||||| || || || || | || ||| ||| Sbjct 13842106 ATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCA 13842162 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || || || ||||| ||||| || || |||||||||||||| ||||||| |||||| Sbjct 13842163 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCA-TATGTT 13842217 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || || | ||| |||||||||||||| || || || Sbjct 13774683 TCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGC 13774624 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 |||||| || || || |||| ||||| || || ||||| || | ||| || |||| Sbjct 13774623 GAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTG---ATCTGG 13774567 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| || || || ||||| || || || || || || || || | || |||| Sbjct 13774566 GGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC-- 13774509 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || ||||||||||| || |||||||| Sbjct 13774508 -TCAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 107 bits (118), Expect = 5e-18 Identities = 169/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||||||||| || || || | ||| |||||||| || || |||| Sbjct 13774458 CATG-CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGT 13774400 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || ||||| || | || || || || |||||||| | || || | Sbjct 13774399 CAGCAAGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTG---GT 13774343 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 || |||||||| || || || ||||| || || || || || || |||| || || Sbjct 13774342 CTGGGGGGATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGC 13774283 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || ||||| ||||| ||||| || || || || || || || |||||||| Sbjct 13774282 T---TTCAACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||||| ||| ||| || ||||| || ||||| || Sbjct 184235 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCC 184176 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || ||||| || | ||| || |||| Sbjct 184175 AGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 184116 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || || || || || || || | || |||| || Sbjct 184115 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCC 184059 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 184058 ACCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 184009 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | || | ||| || ||||| ||||||||||| || Sbjct 13657134 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 13657075 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || | ||| || || | || || ||||| || |||| | ||| || ||| Sbjct 13657074 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTG---GTCTGGA 13657018 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| ||||| |||||||| || ||||| | || ||| | Sbjct 13657017 GGAATACCCTCCTTATCCTGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---T 13656961 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| || || ||||| || |||||||| || || ||||| Sbjct 13656960 TCCACTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 95.1 bits (104), Expect = 3e-14 Identities = 161/231 (70%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || ||||| ||||||||||| ||||| Sbjct 6885935 CCACCACGGAGACGCAGAACAAGGTGCAGGTTGGACTCTTTCTGGATATTATAATCGGCC 6885876 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || ||||| |||||||||| | || ||| ||| Sbjct 6885875 AAAGTACGACCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGG 6885816 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||| || || || | ||| || || || || | ||| |||| ||| Sbjct 6885815 ATACCCTCCTTATCTTGAATCTTGGGTTTGACATTGTCAATGGTATCAGAGCTC---TCT 6885759 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTC-AGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| | ||| | |||||| || || | |||||| Sbjct 6885758 ACCTCGAGGGTGATGGTCTTGCAAGTCAAAAGTCTTCACAAAAACCTGCAT 6885708 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | || || || ||||| || || || || Sbjct 183779 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 183720 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || |||||||||||||| || ||| Sbjct 183719 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 183660 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || ||||| || || || || ||||| || || | || || || || Sbjct 183659 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACC 183600 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 183599 TCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 87.8 bits (96), Expect = 4e-12 Identities = 162/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | ||||| ||| || ||||| || || || | Sbjct 13656682 CATG-CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAAT 13656624 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || || | || || || || ||||| || | ||| || Sbjct 13656623 CAGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTG 13656564 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || ||||||||||| || || || |||||||| || || | || ||| Sbjct 13656563 GTGGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC- 13656505 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || || ||||| || |||||||| || || || ||||| Sbjct 13656504 --TCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 84.2 bits (92), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | || | ||| || ||||| ||||||||||| || Sbjct 13841302 CCACCGCGCAGACGAAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCA 13841361 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| || |||| | ||||| |||||| Sbjct 13841362 AGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTG---GTCTGGG 13841418 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || || || ||||| |||||||| || || || | || ||| | Sbjct 13841419 GGAATACCCTCCTTGTCTTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---T 13841475 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | |||| || || || || || |||||||| || || ||||| Sbjct 13841476 TCGACTTCCACAATGATGGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 13841528 Score = 84.2 bits (92), Expect = 5e-11 Identities = 161/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || || |||| || ||| |||| |||||| |||| Sbjct 13841754 CATG-CCACCACGGAGCCTGAGCACCAGGTGAAGAGTAGATTCCTTTTAGATATTGTAGT 13841812 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | | || || || || | || || || || ||||| || | ||| || Sbjct 13841813 CAGCCAAGGCACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTG 13841872 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| ||||||||||| ||||| || || |||||||| || || | || ||| Sbjct 13841873 GTGGGATACCTTCTTTATCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAAAACTC- 13841931 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || || ||| | | |||||||| || || || ||||| Sbjct 13841932 --TCAACCTCCAAGGTTATGGTTTTCGCAATGAGAGTCTTCACAAAGATTTGCAT 13841984 >seq1 Length=22681039 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | || || || ||||| || ||||||||| Sbjct 22555133 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22555192 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | |||||||| |||||||| || ||||| || ||| Sbjct 22555193 AGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 22555252 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || || ||||| || || || | ||| || || || Sbjct 22555253 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACC 22555312 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||||||| || || || || ||||| |||||||| Sbjct 22555313 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22555359 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | || || || ||||| || ||| ||||| Sbjct 22583151 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGACGGCG 22583210 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | | |||||| ||||||| || || || || ||| Sbjct 22583211 AGAGTCCGGCCGTCCTCGAGCTATTTTCCGACGAAGATAAGGCGTTGCTGGTCCAGCGGG 22583270 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || || ||||| || || || | ||| || || || Sbjct 22583271 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCCACC 22583330 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||||||| || || || || ||||| |||||||| Sbjct 22583331 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22583377 >seq5 Length=29328693 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || ||||| ||||| || ||| Sbjct 21080820 CCACCACGGAGACGAAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCG 21080879 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||| || | ||| || |||||| Sbjct 21080880 AGAGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATGAGCCTCTGCTGG---TCTGGG 21080936 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| || || || ||||| || || | ||| ||| Sbjct 21080937 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC--- 21080993 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || || || |||||||||||||| Sbjct 21080994 TCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 21081046 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||||||||| ||||| | || || || || || || || ||||| |||||| Sbjct 19804622 TCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCGGCGAAG 19804563 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || ||| ||||| || || ||||| || | || ||||| || || Sbjct 19804562 ATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCTTGAACCTTGGCTTTGACATTG 19804503 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || || || || ||||| ||||| || |||| |||||| Sbjct 19804502 TCAATGGTATCGGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCTTC 19804446 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 19804445 ACAAAAATCTGCAT 19804432 >seq2 Length=33308843 Score = 111 bits (122), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||| || || || | |||||| || || ||||| ||||| || Sbjct 6938868 TTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAA 6938927 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | ||| ||| |||||| || || || || ||||||||||| || || || Sbjct 6938928 GATGAGCCTCTGCTGA---TCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGAC 6938984 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | |||| ||| || || | ||||| |||||||| || || ||||| Sbjct 6938985 ATTGTCAATTGTATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTT 6939044 Query 288459 GACGAATATCTGCATT 288474 || || ||||||||| Sbjct 6939045 TACAAAGATCTGCATT 6939060 Score = 105 bits (116), Expect = 2e-17 Identities = 166/234 (71%), Gaps = 13/234 (6%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || |||| || || ||||||||||| || ||||| Sbjct 6939060 TCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGC 6939119 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || |||| ||||| || || ||||| || | ||| || |||||| Sbjct 6939120 AAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTG---ATCTGG 6939176 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | || || || || |||||||| || || || || || || || | ||| ||| Sbjct 6939177 GGGTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTC-- 6939234 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || |||||||| || || |||||||| Sbjct 6939235 -TCAACCTC-AATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 Score = 98.7 bits (108), Expect = 2e-15 Identities = 167/238 (70%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| |||||||| || || | || | ||| ||||||||||| || || | Sbjct 6939284 CATG-CCACCACGGAGTCTGAGAACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTATT 6939342 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| || || ||||| || | || || || || |||||||| | ||| | | Sbjct 6939343 CAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTCG---GT 6939399 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| ||||| || || || ||||| || ||||| || || || |||| || || Sbjct 6939400 CCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTCAGAGC 6939459 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || || || ||||| ||||| || || || || || || || |||||||| Sbjct 6939460 T---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 6939514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179608331546544