Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3 122 9e-23 seq4 120 3e-22 seq1 116 4e-21 seq6 114 1e-20 seq2 113 5e-20 seq5 109 6e-19 >seq3 Length=27879571 Score = 122 bits (134), Expect = 9e-23 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||| | ||| ||||| | ||| |||||||||||| |||||||||||| Sbjct 13656678 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 13656619 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| ||||| || ||||||| ||||||||| | ||| Sbjct 13656618 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 13656559 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | | ||| || ||| ||| | |||| | ||| | | | ||||| ||| || Sbjct 13656558 ATACCCTCTTTATCC-TGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC---TC 13656503 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 13656502 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||||||||| || |||||||| | || || |||||||||||||| || Sbjct 13775331 CTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAA 13775272 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 |||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| | Sbjct 13775271 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 13775213 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 13775212 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 13775156 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 13775155 TCACAAAGATCTGCAT 13775140 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| ||| ||||||||||||||| || || || || |||| | Sbjct 13657123 ACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCC 13657064 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||| || || || | | ||||||||| | || | | |||||| Sbjct 13657063 ATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTT 13657004 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 ||| ||| |||| | ||| | | | | ||||| ||| |||||| || | | Sbjct 13657003 ATCC-TGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAG 13656948 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||||| || || ||||| |||||||||||||| Sbjct 13656947 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | || |||||| || || ||||||||||| || || || | Sbjct 183768 ACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCC 183709 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || || || ||||||||||| | || | | |||||| Sbjct 183708 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTT 183649 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | || | | | ||| | | | ||||| || ||||| || | |||| Sbjct 183648 GTCC-TGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA 183590 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| || || || || || || |||||||| Sbjct 183589 TAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||| | ||||||||||| || |||||| || || |||||||| ||| Sbjct 13775138 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 13775079 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || |||||||| || || || ||||| | ||||||||| | || Sbjct 13775078 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 13775019 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | || || |||||| ||| | |||| |||| | | | ||||| ||| ||| Sbjct 13775018 ATGCCTTCTTTGTCC-TGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCT---TTC 13774963 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| || | || || ||||| || || | ||||| ||||||||||||||| Sbjct 13774962 CACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 13774911 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||||||| ||||||||||| ||||| || || ||||| | |||| || Sbjct 13774892 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 13774833 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 13774832 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 13774773 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || ||| ||| | | | | || || ||| |||||| || | ||||| || Sbjct 13774772 ATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTC 13774716 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || || || ||||| ||||||||||||||| Sbjct 13774715 TTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 13774683 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||||| ||||||||||| || || ||||| || | Sbjct 13656895 ACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCAAGAGTGCGACC 13656836 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||| || || || || ||||| | ||||||||| | || | || ||| || Sbjct 13656835 ATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTT 13656776 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | |||| |||| | | | || || ||| || || | |||| Sbjct 13656775 GTCC-TGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGA 13656717 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || || ||||| |||||||||||||| Sbjct 13656716 TTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 13656680 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| |||||||| || ||||||| | | || || |||||||| |||||||| Sbjct 13657327 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAA 13657268 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 |||||| | ||||||||| | || | || |||||| ||| ||| | || | ||| | Sbjct 13657267 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC-TGAATCTTGGCTTTCACAT 13657209 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||| || ||| || || || | || ||||| || || || || || | Sbjct 13657208 TGTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTT 13657152 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 13657151 TGACAAAGATCTGCAT 13657136 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||||||||| ||||| || || || | || || |||||||| ||||| || Sbjct 13656414 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAA 13656355 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| |||||||| | || | || ||||| || |||||| ||||| | Sbjct 13656354 ATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTG 13656295 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 13656294 TCGATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTA 13656238 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 13656237 ACGAAGATCTGCAT 13656224 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| || | ||| ||| ||||| ||||||||||| || || || || | Sbjct 13774671 ACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCC 13774612 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||| || || || || ||||| | |||||| || | || | || |||||| Sbjct 13774611 ATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTT 13774552 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| | |||| |||| | | | ||||| |||| || || || | | Sbjct 13774551 GTCC-TGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAATG 13774496 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| || || || || ||||| |||||||| ||||| Sbjct 13774495 TGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| || |||| ||| ||||||||||||||| || ||||| || |||| | Sbjct 13841313 ACGAAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCC 13841372 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || || | | || ||||| | || | | |||||| Sbjct 13841373 ATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTT 13841432 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| |||| | ||| | | | | ||||| ||| ||| || || || Sbjct 13841433 GT-CTTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCGACTTCCACAA 13841488 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||||| || || ||||| |||||||||||||| Sbjct 13841489 TGATGGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 13841528 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||||| || || |||||||| || ||||| | | Sbjct 13841541 ACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGTGACC 13841600 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||| || || || || ||||| | ||||||||| | || | || |||||| Sbjct 13841601 ATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 13841660 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCG 42168 |||| ||| | |||| |||| | | | || ||| ||| || || || | | Sbjct 13841661 GTCC-TGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTC---TCAACCTCCAAAG 13841716 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || || ||||| |||||||||||||| Sbjct 13841717 TGATTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||||||||| ||| | || || | | || || |||||||||||||| || Sbjct 13842022 TCCTTTTGAATATTGTAGTCAACAAGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAA 13842081 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | || ||||| | || | || |||||||| |||||| ||||| | Sbjct 13842082 ATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTA 13842141 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 13842142 TCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTG 13842198 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 13842199 ACGAAGATCTGCAT 13842212 >seq4 Length=23292877 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 18773385 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18773326 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 18773325 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18773267 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| |||| |||||||| || |||||||| || || | Sbjct 18773266 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 18773207 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 18773206 CGAAGATCTGCAT 18773194 >seq1 Length=22681039 Score = 116 bits (128), Expect = 4e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || |||||||| |||| || ||||| || || ||||| Sbjct 22555168 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 22555227 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || ||||||||| ||| || || | | Sbjct 22555228 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 22555287 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || ||||| || | |||||| || || |||||||| || || || Sbjct 22555288 ATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22555347 Query 42197 AAAGATTTGCATTTTCACGCCG 42218 ||||| ||||| || |||||| Sbjct 22555348 GAAGATCTGCATCTTGACGCCG 22555369 >seq6 Length=38222195 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||| | ||||| || | || |||||| || || ||||| || || Sbjct 34538180 ACCACCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 34538239 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||||| |||| || |||||||| || ||||| ||||| | ||||||||||| || Sbjct 34538240 CAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGG 34538299 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || |||||||||| ||| || |||| ||| | | | ||||| |||| | Sbjct 34538300 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---T 34538355 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 34538356 CAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 34538407 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || || || | |||||| || | || |||||| || ||||||||||| || Sbjct 34537723 ACCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGC 34537782 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| |||| |||| || | ||||||||| || || || | || |||||| || | || Sbjct 34537783 CAGGGTCCTGCCGTCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCCGGGGG 34537842 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | |||||| ||| ||| || |||| ||| | | | |||||| |||| | Sbjct 34537843 AATTCCCTCCTTATCCTGGATCTTAGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---T 34537898 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| |||||||| || || || || ||||| || ||||| ||||| Sbjct 34537899 CAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 34537950 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| || ||||||||||| |||| ||| || | Sbjct 34520061 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 34520120 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||||||| ||||| || | | ||||||||| | || | | |||||| Sbjct 34520121 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 34520180 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || |||| ||| | | | || || |||| || || |||| | Sbjct 34520181 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAG 34520236 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || ||||| || || || ||||| ||||| Sbjct 34520237 TGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||||| || |||||| || ||||||||||| || ||||||| | || || Sbjct 34519839 CACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 34519898 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | |||||||||||||| || | | |||||| || | ||| | | ||||| ||| Sbjct 34519899 CAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 34519958 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 ||| || |||| | | | |||||| |||| || || |||| ||||| || Sbjct 34519959 GATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTC---TCAACTTCGAGAGTGATTGT 34520015 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| || ||||||||||| Sbjct 34520016 CTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 34520048 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/221 (70%), Gaps = 9/221 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | || |||||| || || ||||||||||||| |||| | Sbjct 34537963 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 34538022 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC-GGCTGGCACGCTCTCCT 42111 ||| || |||||||| || ||||| || | | |||||| || || || | || ||| Sbjct 34538023 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCCT 34538082 Query 42112 TGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACC 42167 ||||| ||| || |||| ||| | | | ||||| |||| || || |||| Sbjct 34538083 TGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGA 34538138 Query 42168 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || ||||| || || || ||||| ||||| Sbjct 34538139 GTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| ||||| |||||||||||||| || || |||| || Sbjct 34519612 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 34519671 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || || | | |||||||| | ||| | | ||||| ||| | Sbjct 34519672 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGG 34519731 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || ||||| | | | || || |||| || || || | |||||||| Sbjct 34519732 ATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTC 34519788 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || | ||||| ||||| || ||||| Sbjct 34519789 TTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || ||||||||||||||||| || || | || || Sbjct 34537286 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCG 34537345 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || || | | ||||||||| | ||| | | ||||| ||| | Sbjct 34537346 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 34537405 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || ||||| | | | || || ||| ||||| || | |||||||| Sbjct 34537406 ATCTTGGCTTTGACATTATCGATGGTATCTGAACTC---TCCACCTCCAAAGTGATGGTC 34537462 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | ||||| |||||||| ||||| Sbjct 34537463 TTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34537494 >seq2 Length=33308843 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| |||||||| |||||||||| | | || || |||||||||||||| || Sbjct 6938412 CTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 6938471 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 |||||| | ||||||||| | || | || ||||||||| ||| | |||| ||| | Sbjct 6938472 TATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCTTTCACAT 6938530 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 6938531 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCT 6938587 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 6938588 TCACAAAGATCTGCAT 6938603 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||| || ||||||||||| ||||| || || ||||| | |||| || Sbjct 6938851 ACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 6938910 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 6938911 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGG 6938970 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 |||||| |||| | | | || ||| |||||| || | ||||| || || Sbjct 6938971 ATTTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTC 6939030 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || ||||||||||||||||| |||||| Sbjct 6939031 CCAGTAAGCGTCTTTACAAAGATCTGCATT 6939060 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||| | ||||||||||| || ||| || ||||| |||||||| ||| Sbjct 6938605 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 6938664 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| |||| || |||||||| || || || || || | ||||||||| | || Sbjct 6938665 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 6938724 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | || || |||||| ||| | |||| |||| | | | ||||| ||| ||| Sbjct 6938725 ATGCCTTCTTTGTCC-TGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCT---TTC 6938780 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| || | || |||||||| || || | ||||| ||||| ||||||||| Sbjct 6938781 CACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 6938832 >seq5 Length=29328693 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || ||||| || ||||| || | || || | |||||| |||||||| Sbjct 21080855 CTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCCTCCAACTGCTTGCCAGCGAA 21080914 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 21080915 GATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 21080973 Query 42137 CGCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| ||| ||||| |||| |||||||| ||||||||||| || | Sbjct 21080974 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTT 21081030 Query 42193 TTACAAAGATTTGCAT 42208 | || || || ||||| Sbjct 21081031 TCACGAATATCTGCAT 21081046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543192103592320