Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq4 111 1e-19 seq3 105 6e-18 seq5 102 7e-17 seq1 91.5 1e-13 seq2 87.8 2e-12 >seq6 Length=38222195 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || ||||| | ||| | |||||| || || ||||| |||||||| ||||| Sbjct 34519819 ATCCCACCACGAAGCCTGAGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCC 34519878 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| |||||||| || || ||| | ||||| | ||||| ||||| Sbjct 34519879 GCAAGAGTCCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGT 34519938 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| || || || |||| || | || | |||||||| ||| Sbjct 34519939 GGGATCCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTATCAATCGTGTCGGAGCTCTC 34519997 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| | || || ||||| ||||| || || || |||||||| Sbjct 34519998 AACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 34520048 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||| | ||| || || || ||||| |||||||| |||||| Sbjct 34520047 ATACCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCG 34520106 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| || || || ||| | ||||| | ||||||||||| Sbjct 34520107 GCCAAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGG 34520166 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || || || || || |||| || | || | ||| || || ||| Sbjct 34520167 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTCTC 34520225 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | ||| || |||||||| ||||| || || || ||||| Sbjct 34520226 GACCTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || || || || || ||||| ||||| || || ||| || ||| || || Sbjct 34520295 CACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTC 34520354 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || ||||| ||| | || | | |||||||| || || ||||| || || || || Sbjct 34520355 AAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 34520414 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || || |||| || | || ||||||||||| |||||| ||||| || | || | Sbjct 34520415 GATCTTGGCCTTGA-CGTTGTCGACGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCT 34520473 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||| ||||| |||||||||||||| Sbjct 34520474 TGCCGGTTAGGGTTTTCACAAAAATTTGCAT 34520504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || | ||||| || ||||| || || ||||| ||||||||||| || ||||| Sbjct 19321996 TTCCACCCCTCAGCCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 19322055 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | ||| | ||| |||||||| || || || | ||||||| || || || || | Sbjct 19322056 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 19322115 Query 45232 GAATGCCTTCTTTATCTTGAA 45252 | |||||||| ||||| |||| Sbjct 19322116 GGATGCCTTCCTTATCCTGAA 19322136 >seq4 Length=23292877 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | |||||||||||| || || || || || ||||||||||| || ||||| Sbjct 15563268 TTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG 15563327 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | ||| | ||| |||| ||| || || || | |||| || || || || || | Sbjct 15563328 CAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAG 15563387 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 | ||||||||||| || || || || ||||| || | ||| || | ||||| Sbjct 15563388 GGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCTCGA 15563447 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || | ||| | || || ||||| |||||||| || ||||||||||| Sbjct 15563448 CCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCAT 15563496 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 18773420 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18773361 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || |||||||||||||| Sbjct 18773360 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 18773301 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||||||| ||||| || Sbjct 18773300 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCCAC 18773242 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || || || ||||| ||||| || || || ||||| Sbjct 18773241 CTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18773194 >seq3 Length=27879571 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 13656453 ATGCCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCA 13656394 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || ||||| || | |||| || ||||||||| || Sbjct 13656393 GCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGG 13656334 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| |||||||| ||||| ||||| || | |||||| || || Sbjct 13656333 GGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCA 13656274 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || ||||| || ||||| || || || || |||||| Sbjct 13656273 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCATC 13656223 Score = 102 bits (112), Expect = 7e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | || || || ||||| | || || || ||||||||||||||| Sbjct 6885935 CCACCACGGAGACGCAGAACAAGGTGCAGGTTGGACTCTTTCTGGATATTATAATCGGCC 6885876 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| ||||| || ||||| ||| | ||||| | |||||| |||||||| Sbjct 6885875 AAAGTACGACCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGG 6885816 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || ||||||||||| || |||||| || | ||| || || ||| || Sbjct 6885815 ATACCCTCCTTATCTTGAATCTTGGGTTTGACATTGTCAATGGTATCAGAGCTCTCTACC 6885756 Query 45294 TCGAGAGTAACCGTTTTGCCGGT-TAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || |||| || | ||| || ||||||| ||||| Sbjct 6885755 TCGAGGGTGATGGTCTTGCAAGTCAAAAGTCTTCACAAAAACCTGCAT 6885708 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||| | ||||| || || |||||||| |||||||| || Sbjct 13657137 ATACCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCT 13657078 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | || || ||||| | ||||| | |||||||| || Sbjct 13657077 GCAAGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGA 13657018 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || ||||| |||||||| ||| | |||| |||||| || || Sbjct 13657017 GGAATACCCTCCTTATCCTGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCC 13656958 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | ||||||||||| || || || ||||| |||||||| Sbjct 13656957 ACTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||||| ||||| || || |||||||| |||||||| || Sbjct 13841299 ATACCACCGCGCAGACGAAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCA 13841358 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | || || ||||| | ||||| | ||| ||||| || Sbjct 13841359 GCAAGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGG 13841418 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || || ||||||||||| ||| | || | |||||| || ||| Sbjct 13841419 GGAATACCCTCCTTGTCTTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCG 13841478 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | | | | |||||||| || || || || ||||| |||||||| Sbjct 13841479 ACTTCCACAATGATGGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 13841528 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||| || || || ||||| ||||| || ||||| | |||| ||| || Sbjct 183762 CACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCCATCCTC 183703 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || || || || | |||| || ||||||||||| || || || || || || || Sbjct 183702 AAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTG 183643 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||| || || | || | || | |||||| |||||||| || || || || | || | Sbjct 183642 AATCTTGGCCTTAA-CGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT 183584 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351 ||||||| || ||||| || |||||||||||| ||||| || Sbjct 183583 TGCCGGTGAGGGTTTTCACGAAAATTTGCATC-TGCGACAAA 183543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTT--TAGAATCG 45188 ||| | |||||| ||||| ||||| || || || ||||| || | || | || ||| Sbjct 13775121 CACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATC--TGCCAGTGTCCTACCATCC 13775064 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | || |||||||| | || | | |||||||| || |||||||||||||| || Sbjct 13775063 TCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 13775004 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||| ||| |||| || | ||||| || || ||||| | ||||| ||| Sbjct 13775003 TGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATAGTT 13774944 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||| || ||||| |||||||| Sbjct 13774943 TTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 13774912 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | | ||||||||| || || || ||||| || ||||||||||||||||| Sbjct 9477436 TTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTG 9477495 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | |||| | ||| ||||| || || || || | |||| || ||||| || || | Sbjct 9477496 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAG 9477555 Query 45232 GAATGCCTTCTTTATCTTGAA 45252 | |||||||| || || |||| Sbjct 9477556 GGATGCCTTCCTTGTCCTGAA 9477576 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 |||||| | || || ||||||||||| ||||| || ||||| | || | | ||| Sbjct 13841544 CAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGTGACCATC 13841603 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 || | ||||| ||||| | || | | |||||||| || |||||||| || || || Sbjct 13841604 CTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 13841663 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| ||| |||| || | || |||||| ||| || || | ||| | || Sbjct 13841664 CTGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTCTCAACCTCCAAAGTGATTGT 13841723 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || || ||||| |||||||| Sbjct 13841724 CTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| || | || || || || || ||||||||||| ||||| || || Sbjct 13841983 ATACCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCA 13842042 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | || || || || | |||| | ||| |||||||| Sbjct 13842043 ACAAGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGG 13842102 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||| || || || ||||| ||||| || | |||||| || || Sbjct 13842103 GGGATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCA 13842162 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || ||||| || ||||| || || || || ||||| Sbjct 13842163 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 13842212 >seq5 Length=29328693 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 45147 GATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCG 45206 || ||||| ||||||||||||||| | || | ||| ||||| || ||||| ||| Sbjct 19804625 GACTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCGGCG 19804566 Query 45207 TATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATC 45266 | ||||| | |||||| |||||||| || || || |||||||||| || ||||| Sbjct 19804565 AAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCTTGAACCTTGGCTTTGACA 19804506 Query 45267 GCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTT 45326 || | ||| ||||| ||| || || || || | || ||||| || | ||| || Sbjct 19804505 TTGTCAATGGTATCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCTTC 19804446 Query 45327 ACAAAAATTTGCAT 45340 |||||||| ||||| Sbjct 19804445 ACAAAAATCTGCAT 19804432 >seq1 Length=22681039 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 22555133 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22555192 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || || | |||||||| ||| | || | || |||||||||||||| Sbjct 22555193 AGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 22555252 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || ||||| || || || | || | ||||||||| ||||| || Sbjct 22555253 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACC 22555312 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || | || | ||| || || ||||| ||||| || || || |||||| Sbjct 22555313 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 22555360 >seq2 Length=33308843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTT--TAGAATCG 45188 ||| | |||||| || || || || || || || ||||| || | || | | || Sbjct 6938622 CACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATC--TGCCAGTGTCCTGCCGTCC 6938679 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | || |||||||| | || | | |||||||| || |||||||||||||| || Sbjct 6938680 TCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 6938739 Query 45249 TGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| ||| |||| || | || | ||||| || || ||||| | ||||| || Sbjct 6938740 TGAATCTTTGCCTTGA-CGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATGGT 6938798 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| | ||| || |||||||||||||| Sbjct 6938799 TTTCCCGGTCAAAGTCTTCACAAAAATTTGCAT 6938831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985978678080