Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 152 6e-32 seq1 138 1e-27 seq6 131 2e-25 seq3 107 2e-18 seq5 100 3e-16 seq2 100 3e-16 >seq4 Length=23292877 Score = 152 bits (168), Expect = 6e-32 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 18773385 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18773326 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | ||| | || |||||||||| |||||| ||||| ||| Sbjct 18773325 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18773267 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | |||||||| || ||||| || ||||| | Sbjct 18773266 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 18773207 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 18773206 CGAAGATCTGCAT 18773194 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | ||||||||| || | || |||||||||||| ||||| || | Sbjct 15563270 CCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGCA 15563329 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || || |||||||| || || |||| | ||| || || | || Sbjct 15563330 AGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGG 15563389 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || |||||| |||||| |||| | | | || || || || || Sbjct 15563390 ATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCTCGACC 15563449 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || | |||||||| || || ||||| ||||| || || |||||||| ||| Sbjct 15563450 TCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATTG 15563500 >seq1 Length=22681039 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| ||||| || |||| || Sbjct 22555150 CACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTC 22555209 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||| || |||||||| || | |||||||||||| | ||| | || ||||||||| Sbjct 22555210 GAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTG 22555269 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | |||||| || ||||| |||| |||||| || || Sbjct 22555270 GATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTT 22555329 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| || ||||| || ||||| ||||| ||| Sbjct 22555330 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 22555363 >seq6 Length=38222195 Score = 131 bits (144), Expect = 2e-25 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||| | |||||| || | || |||||| ||||| |||||||||| Sbjct 34538181 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 34538240 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| || |||| ||||||||||| |||||||| || | | ||||||||||| || Sbjct 34538241 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 34538300 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||||||| |||||| ||||| ||| | | | ||||| |||| || Sbjct 34538301 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TC 34538356 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 34538357 AACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 34538407 Score = 109 bits (120), Expect = 6e-19 Identities = 144/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 46404 CCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| | ||||| |||| ||||||||||| |||||||| Sbjct 22063132 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 22063073 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | || | || |||||||| |||||| ||||| | Sbjct 22063072 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22063013 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||||| ||||| || | |||||||| || ||||| || ||||| || Sbjct 22063012 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 22062953 Query 46583 AAGATTTGCAT-TTTGC 46598 || || ||||| ||||| Sbjct 22062952 AATATCTGCATCTTTGC 22062936 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||| | || |||||| ||||||||||| |||| | ||| || | Sbjct 34520061 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 34520120 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| |||||||| ||||| | ||||||||| | || | | |||||| Sbjct 34520121 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 34520180 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||||| ||| | | | || || |||| || || || | | Sbjct 34520181 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAG 34520236 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || || ||||| || ||||| ||||| Sbjct 34520237 TGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| |||| || || | |||| || | |||||| ||||| || Sbjct 34537759 CTCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTCCAACTGCTTACCGGCAAA 34537818 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | |||||| || | || | | |||||| ||| |||||| ||||| ||| Sbjct 34537819 GATCAATCTCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGA-CGT 34537877 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| || || || | |||||||| || || || || || | Sbjct 34537878 TGTCAATCGTGTCGGAGCTC---TCAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTCT 34537934 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||| ||||| Sbjct 34537935 TCACGAAGATCTGCAT 34537950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/221 (70%), Gaps = 9/221 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||| | || |||||| ||||| ||||| || | | || | | Sbjct 34537963 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 34538022 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC-GGCCGGCACGCTCTCCT 46496 ||| ||||||||||| |||||||| ||||| | |||||| || || || | || ||| Sbjct 34538023 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCCT 34538082 Query 46497 TGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACC 46552 ||||| |||||| ||||| ||| | | | ||||| |||| || || || | Sbjct 34538083 TGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGA 34538138 Query 46553 GTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| || ||||| ||||| Sbjct 34538139 GTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || | || || || |||| ||||||||||||||||| || Sbjct 34519629 CTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAA 34519688 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | |||||||| | || | | ||||| ||| |||||| |||| | Sbjct 34519689 GATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGGATCTTGGCTTTGACATT 34519748 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | || || |||| || || |||| |||||||| ||||| |||| || || Sbjct 34519749 ATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTT 34519805 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 34519806 CACAAAAATCTGCAT 34519820 >seq3 Length=27879571 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||| | ||| |||||| |||||||||||||| | ||| ||||| | Sbjct 183996 ACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCC 183937 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| ||||| || || | | ||||||||| | || | || ||||| Sbjct 183936 ATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 183877 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| ||||| ||||| ||| | | | ||||| |||| || || || | | Sbjct 183876 GTCCTGAATCTTAGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TCGACCTCAAGGG 183821 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || || |||| || || |||||||| ||||| Sbjct 183820 TGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 183781 Score = 102 bits (112), Expect = 9e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||| | || |||||| ||||| ||||| || | || || || | Sbjct 183768 ACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCC 183709 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || |||| ||||||||||| | || | | |||||| Sbjct 183708 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTT 183649 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||| | ||| | | | ||||| || ||||| || | |||| Sbjct 183648 GTCCTGAATCTTGGCCTT-AACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA 183590 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAACAACAC 46609 | || ||||| || || ||||| || || |||||||| | |||||||| || Sbjct 183589 TAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCATCTGCGACAAACAAAAC 183537 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | ||||| ||| |||| || |||||||||||||| || Sbjct 184428 CTCCTTCTGGATATTGTAGTCTGCAAGAGTACGCCCGTCCTCAAGCTGCTTGCCGGCAAA 184369 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||||||||| ||||| ||| | | Sbjct 184368 GATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTGGCCTTCACATT 184309 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| ||||| || | |||||||| || || || || || || Sbjct 184308 GTCAATGGTGTCTGAGCTC---TCCACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTCTT 184252 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 184251 GACAAAAATCTGCAT 184237 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || ||| ||||| || |||||||| | || || || |||| || Sbjct 13774437 CACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCCTC 13774378 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || |||| | |||||||| | || | | ||||||||| Sbjct 13774377 GAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTG 13774318 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||||| | | | ||||| ||| ||| || || | ||||| || Sbjct 13774317 GATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCT---TTCAACCTCGAGGGTGATAGT 13774261 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || ||||| |||||||| ||||| Sbjct 13774260 CTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | || ||| |||||||||||||| || | || || || | Sbjct 13774671 ACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCC 13774612 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| |||||||| || || | | |||||| || | || | || |||||| Sbjct 13774611 ATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTT 13774552 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| ||||| ||||| | | | ||||| |||| || || |||| || Sbjct 13774551 GTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAATGT 13774495 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || || || || || |||||||| ||||| Sbjct 13774494 GATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||||||||| || | || ||||| ||||| ||||| || | Sbjct 13841528 TGCCACCACAAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTG 13841587 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||||| | | || || ||||| || || || || || | | ||||||||| | | Sbjct 13841588 CAAGAGTGTGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAG 13841647 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATT 46541 | | || |||||||||| ||||| ||||| | | | || ||| ||| | Sbjct 13841648 GAATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTC---T 13841704 Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || |||| ||||| || || || || || || ||||||||||||||||| Sbjct 13841705 CAACCTCCAAAGTGATTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/172 (72%), Gaps = 8/172 (5%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | || || || |||| ||||||||||| ||||| || Sbjct 6885671 CTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 6885612 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||| ||||| | || | || |||||||||| |||||| |||| ||| Sbjct 6885611 GATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGT 6885553 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||| |||| || || || | |||||||| ||||| || Sbjct 6885552 TGTCGATGGTGTCGGAGCTC---TCTACCTCGAGGGTGATGGTCTTGCCGGT 6885504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||||||||| || | || ||||| || ||||||||||| | Sbjct 13656908 TGCCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCG 13656849 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||||||| | || || ||||| || || || || || | | ||||||||| | | Sbjct 13656848 CAAGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAG 13656789 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||| |||||| ||||| ||||| | | | || || ||| | Sbjct 13656788 GAATGCCCTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAA 13656729 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||||| || || || || || || || |||||||||||||| Sbjct 13656728 CCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 13656680 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||||| || |||||||| | ||||| | |||| || Sbjct 13774892 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 13774833 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| || || || || || | | |||||| || | || | | |||||||||| | Sbjct 13774832 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 13774773 Query 46505 ATCTTCTTCTTGAGCGTCGCCACC-GTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| | ||| | | | | || || || ||| |||||| |||| ||||| || Sbjct 13774772 ATCTT-TGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGT 13774717 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || || || || || ||||||||||||||| Sbjct 13774716 CTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 13774683 >seq5 Length=29328693 Score = 100 bits (110), Expect = 3e-16 Identities = 141/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | || || || |||| ||||||||||| ||||| || Sbjct 19804395 CTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 19804336 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||| || || | || | || |||||||||| |||||| |||| ||| Sbjct 19804335 GATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGT 19804277 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| ||||| || | |||| ||| ||||| || ||||| | Sbjct 19804276 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGACGGTCTTGCCGGTAAGCGTCT 19804220 Query 46578 TAACAAAGATTTGC 46591 | |||||||| ||| Sbjct 19804219 TCACAAAGATCTGC 19804206 >seq2 Length=33308843 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 7/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | ||| |||||||||||||||||| |||| || ||||| | Sbjct 6939072 ACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGCAAGGGTGCGGCC 6939131 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| |||||||| || || | | |||||| || | || | || |||||| Sbjct 6939132 ATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGTATGCCCTCCTT 6939191 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| |||||| ||||| | | | || || ||| || || | || || Sbjct 6939192 GTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTC---TCAACCT-CAATGT 6939247 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || || || || ||||||||||| ||||| Sbjct 6939248 GATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/210 (70%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| |||||||| ||||| || | || || ||| |||| || ||||||||||| || || Sbjct 6939323 CTCTTTTTGGATGTTGTATTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAA 6939382 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | || |||| | || | | ||||||||| |||||| |||| | Sbjct 6939383 GATCAGCCTTTGTCGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATT 6939442 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 6939443 GTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTT 6939499 Query 46579 AACAAAGATTTGCAT---TTTGCACAAACA 46605 |||||||| ||||| || |||||||| Sbjct 6939500 CACAAAGATCTGCATCTGTTGACACAAACA 6939529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565216864416960