Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 264 1e-65 seq4 152 5e-32 seq3 134 1e-26 seq1 131 2e-25 seq2 116 4e-21 >seq6 Length=38222195 Score = 264 bits (292), Expect = 1e-65 Identities = 542/794 (68%), Gaps = 15/794 (2%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 |||||||| || || |||||||||||||| || ||| || | || | ||||| | Sbjct 28138851 AGCAGCCTATCAGCGACGAACTCGATGTACTGACCCATCAGATCACCGTTCA-TCCCAAC 28138909 Query 132781 --AGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTG 132837 || ||||| || | ||| ||| || ||| | || ||| ||| | ||||||| Sbjct 28138910 TAAGGCGCAC-GGTAACGCGTCGCAGACGAACTCCTT-CTCTATGTCAACCGCGTTCCGC 28138967 Query 132838 ACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA--ACATCAAGC 132895 |||||| | | |||||| || || | || || || | | || | | | || Sbjct 28138968 ACGATTGACTTCACGCGCTCCTCGGTGAGC--TTCATCCGGAGGAGGGAGTAGAGAAGGC 28139025 Query 132896 AAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGC 132955 | || |||||||| || | ||| || || | || || | ||||| ||| |||| | Sbjct 28139026 ACGCGAAGTCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTCAGAC 28139085 Query 132956 CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015 | ||||| | ||||| ||||| ||||||||||| ||| ||| || ||||| ||||||| Sbjct 28139086 CCGGCATCAACCCGCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCCGAGAAGAAGA 28139145 Query 133016 CGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGA 133075 || || ||| ||||| ||||| | ||||| |||| || ||| || | ||| Sbjct 28139146 TCCCTTCCACGCAGGCGAAGGCCACGATCCGCTCCGCGAAAGT---TTCGGAGCCGTCGA 28139202 Query 133076 TCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA 133135 |||| ||| ||||| | ||||||| |||||| || || || |||| ||| | Sbjct 28139203 TCCATTTCAGGGCCCACTGCGCCTTTTTCGCGACGCAAGGGATGGTGTCGACGGCCCGGA 28139262 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | |||| ||||| |||||| | |||||| |||| |||| ||||| | Sbjct 28139263 AGAGACGGGACTTCTCGTCCGAGTCTTTGATGTAGGTCTCGAGGAGGAGGCTGTACATCT 28139322 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 | ||||| | |||||| || ||||| || |||||||| ||| |||||||| |||| Sbjct 28139323 CGGAGTGGATGTTCTCAATCGCGATCTGGAAGCCGTAGAAGGCACGCGCCTCCGAGACCT 28139382 Query 133256 GCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 | || || | ||| | || | ||||| ||| |||||||||||| |||||||| Sbjct 28139383 GGACCTCCTTCATGAACCTTCCGGCAAGATTCTCGAGTACGATGCCGTCGGAGGCGGCGA 28139442 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 | ||||| || ||||| ||||||| || |||| | | | | | ||||||| || Sbjct 28139443 AGAAGGCGAGGACGTGAGTGATGAAGTGCTTCTCGCCGGGGGTTAGGGTTTCCCAGTGGC 28139502 Query 133376 GCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434 || || |||| | || || ||||||||| ||||||| |||||||||||||| || ||| Sbjct 28139503 GC-TGGTCTTGATCGAGATCGACCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTG 28139561 Query 133435 TACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCG 133494 ||||| ||| || |||| ||||| || || || || |||||| ||||| | Sbjct 28139562 TACATCTCCCAGATCTCCGGGTATTGAATCGGGAACATGCAGAACCGGTCCGGGTTGGCC 28139621 Query 133495 CGCAACAGCGGCTC 133508 || |||||||| Sbjct 28139622 ATCAGGAGCGGCTC 28139635 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||| ||||||||| |||| |||||| | || Sbjct 34520504 ATGCAAATTTTTGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCC 34520445 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| ||| | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 34520444 GACACCGTCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 34520386 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||| || || ||||| || |||| || |||||| ||||||||| Sbjct 34520385 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAA 34520326 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || || ||||||| ||| | || || || Sbjct 34520325 CATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGTCTCAGGGGTGG 34520278 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| ||||||||| |||| || ||| | || Sbjct 34538407 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTCC 34538348 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 34538347 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 34538289 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||| || || ||||| || |||| || || | ||||||||| Sbjct 34538288 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGACTACAA 34538229 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||||| ||| | || || || Sbjct 34538228 CATCCAGAAGGAGTCAACTCTCCACCTGGTGCTCCGTCTCAGGGGTGG 34538181 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| |||||||| ||||| || ||||| || |||||||| |||| || ||| Sbjct 22062938 AAAGATGCAGATATTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTGGAGAG 22062997 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 || ||||| | | | | | || | || |||| ||||| || || || || | || Sbjct 22062998 CAGCGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGA 22063057 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| ||||| | ||| || || ||||| || |||| |||||| | |||||| Sbjct 22063058 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTA 22063117 Query 38420 CAACATCCA-AAAGG 38433 ||||||||| ||||| Sbjct 22063118 CAACATCCAGAAAGG 22063132 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| |||| || ||| | || Sbjct 34537950 ATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 34537891 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| || || |||||||||||| | || || Sbjct 34537890 GACACGATTGACAACG-TCAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCA 34537832 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || || || ||| |||| |||| | ||||| ||| ||||| Sbjct 34537831 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAA 34537772 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| || || |||||||| || ||||| || || Sbjct 34537771 TATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGG 34537724 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || ||||| |||| |||||| | | Sbjct 34520276 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 34520217 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| |||||||||||| | ||||| Sbjct 34520216 GATACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 34520158 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| || || ||| |||| || | || || | ||| ||||| Sbjct 34520157 GCAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAA 34520098 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||||||||||| ||| Sbjct 34520097 TATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGT 34520061 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || ||||| |||| |||||| | || Sbjct 34538179 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 34538120 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAG-AGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| ||||| | | || || ||| | || | Sbjct 34538119 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGGAAGGGATCCCCCCAGATC 34538061 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| || | || | ||| || || ||||| || |||| | ||| | || |||| Sbjct 34538060 AGCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACA 34538001 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || || ||||||||||| ||| Sbjct 34538000 ACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTCCGT 34537963 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || ||||| |||| || ||| | || Sbjct 34520048 ATGCAAATCTTCGTGAAGACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAGAGCTCC 34519989 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| || || || || || || | || || Sbjct 34519988 GACACGATTGATAACG-TCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCA 34519930 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || || || |||| || | | || || || ||||| Sbjct 34519929 GCAGAGGTTGATTTTCGCTGGTAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 34519870 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| ||||| |||| |||||||||||||| Sbjct 34519869 TATCCAGAAGGAGTCGACTCTGCATTTGGTGCT 34519837 >seq4 Length=23292877 Score = 152 bits (168), Expect = 5e-32 Identities = 167/217 (77%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || ||||||||| |||| || ||| || || Sbjct 18773194 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCCTCC 18773253 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 18773254 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 18773311 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 18773312 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACA 18773371 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| || || | ||||| || Sbjct 18773372 ACATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCG 18773408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 || || |||||||| ||||| ||||| || || || || |||||||| | || |||||| Sbjct 15563502 AACAATATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAG 15563443 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | || | | | | | | |||| || |||| |||||||| || || || | Sbjct 15563442 AGTAGTGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCCA 15563383 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || |||||| | || || | || ||||| || ||||| || | | || || || Sbjct 15563382 GATCAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGAT 15563323 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||||||||||||||| |||| || || ||||| || Sbjct 15563322 TACAACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTG 15563284 >seq3 Length=27879571 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| ||||| ||||| || |||||| | || || ||| | | Sbjct 183553 ATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 183612 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | || || | ||||| |||||||| ||| | ||||| Sbjct 183613 GACACCATTGACAACG-TTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 183671 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| ||||| || || | || ||||| || ||||| Sbjct 183672 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGATTACAA 183731 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || ||||||||||| ||| || | || || Sbjct 183732 CATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTCTGCGTGGTGG 183779 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||||||||||| || || ||||| | | Sbjct 13841528 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAAACCATCATTGTGGAAGTCGAAAGCTCT 13841469 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||| | ||||| ||||| |||||| | |||||| Sbjct 13841468 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAA 13841409 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| || ||||| ||||| || || | | || || ||||| || Sbjct 13841408 CAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAAT 13841349 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||||||| | || ||||| || ||||| ||| || | || || Sbjct 13841348 ATTCAAAAGGAGTCCACTCTGCAATTAGTGCTTCGTCTGCGCGGTGG 13841302 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||||||| | || || ||| | | Sbjct 184009 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCTTGGAGGTGGAGAGCTCT 184068 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || | ||||| Sbjct 184069 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 184128 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || ||||| || || | || ||||| ||||||||| Sbjct 184129 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGACTACAAC 184188 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || ||||||||||| ||| Sbjct 184189 ATCCAGAAGGAATCCACCCTTCATTTGGTGCTTCGT 184224 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || ||||||||| | || |||||| | | Sbjct 183781 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 183840 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| || || |||||| | ||||| Sbjct 183841 GACACCATTGACAACG-TCAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 183899 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || || ||||| || || | |||||||| |||||||| Sbjct 183900 GCAGAGGCTTATCTTTGCCGGGAAGCAGCTTGAGGATGGCCGCACCCTAGCAGACTACAA 183959 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||||||||||| ||| Sbjct 183960 TATCCAGAAGGAGTCTACCCTCCATTTGGTGCTTCGT 183996 Score = 100 bits (110), Expect = 3e-16 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA--GGCCA 38301 |||||||| || || || || ||||| || || || |||||| | || || || | || Sbjct 13656680 ATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACAATCACCTTGGAGGTTGAAAGTTCA 13656739 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| || || | | || | ||| || | ||||||||||| ||||| | |||| Sbjct 13656740 GATACAAT-TGATAATG-TCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGACC 13656797 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||||| || || |||||||| || || | ||||| || ||||||| Sbjct 13656798 AGCAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCGCACTCTTGCGGACTACA 13656857 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | || || |||||| | || || || |||||| ||||| Sbjct 13656858 ATATTCAGAAGGAATCAACTCTTCACTTGGTGTTGCGT 13656895 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38236 TTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 38295 || || | ||||| || || || ||||| ||||| ||||| || |||||| |||| || | Sbjct 13774220 TTTAACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTG 13774279 Query 38296 AGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCG 38355 | | | |||| | | | | || | ||| |||| ||||| |||||||| ||| Sbjct 13774280 AAAGCTCTGACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCC 13774339 Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 | ||||| || |||| || | || ||||| ||||| || |||| || || || | Sbjct 13774340 CAGACCAGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTG 13774399 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||||| ||||| || | || || || ||||||| Sbjct 13774400 ACTACAACATTCAAAAAGAGTCCACCCTCCACCTGGTGCT 13774439 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || || || || || || ||||| | || || || | | Sbjct 13774683 AATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACAATCACATTGGAGGTGGAAAGCTC 13774742 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||||| ||| |||| ||||| ||||| |||||| | || || Sbjct 13774743 TGATACAATTGACAATGTTAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCA 13774802 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || || |||||| |||| |||| | || || |||||||| Sbjct 13774803 GCAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAA 13774862 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||||||| | || |||| ||||| || ||| || | || || Sbjct 13774863 CATTCAAAAGGAATCAACATTGCACTTGGTTCTCCGTCTGCGTGGTGG 13774910 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || ||||| | || || ||| || Sbjct 13841756 ATGCAAATCTTTGTTAAGACCCTCACCGGTAAGACAATCACTTTGGAGGTTGAGAGTTCC 13841697 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | ||| || | ||||| ||||| ||||| | ||||| Sbjct 13841696 GATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 13841637 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||||| || || |||||||| || || | | ||| || || |||||| Sbjct 13841636 CAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCACACTCTTGCAGATTACAAC 13841577 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || |||||| ||||| Sbjct 13841576 ATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCGT 13841541 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || |||||||||||||| | || || || | | Sbjct 13656908 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 13656967 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||| | || || ||||| ||||| | ||||| Sbjct 13656968 GACACCATAGATAATGTGAAAGCTAAAATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 13657027 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || || ||||| || || | | || || ||||| || Sbjct 13657028 CAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAAT 13657087 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||||||| | || ||||| |||||||| ||| || | || || Sbjct 13657088 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCGGTGG 13657134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || |||||||| | || || ||| | | Sbjct 13774456 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 13774515 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||| || | ||||| ||||| || ||| | || || Sbjct 13774516 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 13774575 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||||||||| || || | || || ||| || ||||| Sbjct 13774576 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCGCAGATTACAAT 13774635 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || | || || || ||||||| ||| Sbjct 13774636 ATCCAAAAAGAGTCCACCCTCCACCTGGTGCTCCGT 13774671 >seq1 Length=22681039 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || || ||||| | || || ||| || Sbjct 22555362 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 22555303 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 |||||| | | | | | || | || |||| ||||| ||||| || ||||||| | Sbjct 22555302 TCCGACACCATCGATAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCAT-CCCGCCGGA 22555244 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| || |||||||| || |||| || || ||| |||||| Sbjct 22555243 CCAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGACTA 22555184 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || || ||||||| || Sbjct 22555183 CAACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCG 22555145 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || || ||||| | || || ||| || Sbjct 22583380 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCC 22583321 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 |||||| | | | | | || | || |||| ||||| ||||| || ||||| | | Sbjct 22583320 TCCGACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCAT-CCCGCTGGA 22583262 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || || || | || || ||| |||| || |||| || || ||| || ||| Sbjct 22583261 CCAGCAACGCCTTATCTTCGTCGGAAAATAGCTCGAGGACGGCCGGACTCTCGCCGTCTA 22583202 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || || ||||||| || Sbjct 22583201 CAACATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCG 22583163 >seq2 Length=33308843 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||| ||||||||| | || || || | | Sbjct 6939514 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCTCT 6939455 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||| |||| ||||| |||||||||||| | |||| | Sbjct 6939454 GACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCGA 6939395 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| || | || ||||| ||||| || |||| ||| || ||| || |||||| Sbjct 6939394 CAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGAATACAAC 6939335 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||| || | || || || ||||| || Sbjct 6939334 ATCCAAAAAGAGTCCACTCTCCACTTGGTTCT 6939303 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || ||||| ||||| || || || || |||||| | || || || | | Sbjct 6939060 AATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTC 6939001 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | || | |||||||| ||||| ||||| || ||| | || || Sbjct 6939000 CGATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCA 6938941 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || || |||||| |||| |||| | || || |||||||| Sbjct 6938940 GCAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAA 6938881 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||||||| | || |||| ||||| || ||| || | || || Sbjct 6938880 CATTCAAAAGGAATCTACCTTGCACTTGGTTCTCCGTCTGCGTGGTGG 6938833 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || |||||||| | || || ||| | Sbjct 6939286 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATT-GAGGTTGAGAGTTCT 6939228 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | ||| |||| ||||| ||||| || ||| | || || Sbjct 6939227 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 6939168 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||||||||| || || | |||||||| ||| ||||| Sbjct 6939167 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 6939108 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || ||||||| ||| || | || || Sbjct 6939107 ATCCAAAAGGAGTCTACTCTTCACCTGGTGCTCCGTCTGCGTGGTGG 6939061 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || | || || |||||||| || | || || || | | Sbjct 6938832 AATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTC 6938773 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | || | ||| || | |||||||| || |||||| | |||| Sbjct 6938772 AGACACAATTGATAACG-TCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACC 6938714 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| |||| || | || || || ||||| || |||| | || || || |||| Sbjct 6938713 AGCAGAGGCTTATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTACA 6938654 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || || || |||| |||||||||||||| ||| Sbjct 6938653 ACATTCAGAAAGAGTCGACTCTGCATTTGGTGCTCCGT 6938616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500153743416320