Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq3048 639 2e-178 seq2811 527 8e-145 seq2823 408 5e-109 seq838 363 2e-95 seq929 329 4e-85 seq990 217 2e-51 seq2704 163 3e-35 seq1012 134 2e-26 seq672 114 2e-20 >seq3048 Length=155691 Score = 639 bits (708), Expect = 2e-178 Identities = 730/975 (75%), Gaps = 8/975 (1%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 1396 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1337 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || |||||||| | || |||||||| || ||||| || ||||| Sbjct 1336 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 1278 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || |||| || | | || || ||||| || || || ||||| || | Sbjct 1277 TCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTAT 1218 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 ||| | || || || ||| | ||||| |||||||| |||||||| || || |||| Sbjct 1217 CCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGA 1158 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113 ||| ||| | || |||||||| |||| | || ||||| | |||||| | | || | Sbjct 1157 TGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG--T 1100 Query 182114 CTACGC---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTG 182170 || || ||| ||||| ||||||||||||||| || ||| | |||||||| || || Sbjct 1099 GTA-GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTG 1041 Query 182171 GATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCC 182230 ||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| || Sbjct 1040 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCC 981 Query 182231 TTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTA 182290 | |||||||| || || || | ||||| || |||||||| || || ||||||| Sbjct 980 AATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 921 Query 182291 TATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGT 182350 ||| | || |||||||||||||||||||| |||||||| || || |||||| | ||||| Sbjct 920 CATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGT 861 Query 182351 AGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTC 182410 || |||||||| || ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 860 GGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 801 Query 182411 ACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGA 182470 | || | || || || || | || || || | ||||||| ||||||||||| Sbjct 800 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 741 Query 182471 AGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATA 182530 ||||| |||||||| ||||| || || ||||| || || || || |||||||||||||| Sbjct 740 GGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 681 Query 182531 CGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGG 182590 || |||||||| || ||||| || ||||||||| | ||||| |||||||| || || Sbjct 680 TGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGG 621 Query 182591 AATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTT 182650 |||||||||||||| | ||| || ||| ||||| |||||| | || ||||| || || Sbjct 620 TATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTT 561 Query 182651 CAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAA 182710 ||| || || | ||||| |||| |||||||| |||| |||||||| ||| | | || Sbjct 560 CAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAA 501 Query 182711 CCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGA 182770 ||| ||| |||||||||||||||||||||||| ||||| || || || ||||| ||||| Sbjct 500 CCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGA 441 Query 182771 TCTTGCTGCTGCTGA 182785 || ||||||| ||| Sbjct 440 CCTAGCTGCTGTTGA 426 Score = 574 bits (636), Expect = 6e-159 Identities = 735/1010 (73%), Gaps = 6/1010 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| || |||||||| || | || || Sbjct 33683 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 33742 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 33743 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 33802 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372 |||||||||||| | || ||||||| | |||||| |||||| | || || || || Sbjct 33803 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTT 33862 Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432 || || |||||| || | | | || ||| | ||||||| ||||||||||| | ||| Sbjct 33863 TCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 33922 Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492 || || ||| || ||||| ||| | || || || |||| ||||| || || ||||| Sbjct 33923 GGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTCGCTCTGCACGGC 33982 Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552 || || | || || ||||||||| | || || |||||||||||||| | || | Sbjct 33983 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTA 34042 Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612 || ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct 34043 CGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTG 34102 Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672 || ||||| || ||||||||| ||||||||||| || ||||| || |||||||| || Sbjct 34103 ATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCAGCTATA 34162 Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729 ||| ||| |||| || |||| ||||||| || || ||||| || ||||| || ||| Sbjct 34163 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 34219 Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789 ||||||||||||||||| | | || | || || | | ||||| ||||||| || Sbjct 34220 ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACC 34279 Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849 ||||| ||||| || | ||||||||| || ||||| |||||| || ||| | | Sbjct 34280 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 34339 Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909 ||||||| ||||| || ||||| ||||| || || || || || ||||| |||||||| Sbjct 34340 ACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 34399 Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969 |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 34400 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 34459 Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029 ||| | ||| | | || |||| | | || || || || || || ||||| ||||| Sbjct 34460 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 34519 Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089 || || ||| || ||| | ||||| |||||||| ||||||||||| |||||||| || Sbjct 34520 TTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 34579 Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149 || || || | || ||||| | ||||| ||| | || || ||||| || ||||| Sbjct 34580 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 34639 Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 || ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 34640 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 34689 >seq2811 Length=1036 Score = 527 bits (584), Expect = 8e-145 Identities = 698/963 (72%), Gaps = 8/963 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| || |||||||| || | || || Sbjct 77 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 136 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 137 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 196 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372 |||||||||||| | || ||||||| | |||||| |||||| | || || || || Sbjct 197 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTT 256 Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432 || || |||||| || | | | || ||| | ||||||| ||||||||||| | ||| Sbjct 257 TCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 316 Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492 || || ||| || ||||| ||| | || || || |||| |||| | | || ||||| Sbjct 317 GGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG-CTCTGCACGGC 375 Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552 || || | || || ||||||||| | || || |||||||||||||| | || | Sbjct 376 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTA 435 Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612 || ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct 436 CGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTG 495 Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGC-AGCAAT 183671 || ||||| || ||||||||| ||||||||||| || ||||| || ||||| ||| || Sbjct 496 ATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCTAGCTAT 555 Query 183672 CTTTAGATTC---CTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCA 183728 ||| ||||| || || |||| |||||||| | || ||||| || ||||| || || Sbjct 556 ATTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATTGAACCCATTTCA 612 Query 183729 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCAC 183788 |||||||||||||||||| | | || | || || | | ||||| ||||||| || Sbjct 613 TATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTAC 672 Query 183789 AGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTC 183848 ||||| ||||| || | ||||||||| || ||||| |||||| || ||| | | Sbjct 673 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCC 732 Query 183849 CACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTT 183908 ||||||| ||||| || ||||| ||||| || || || || || ||||| |||||||| Sbjct 733 AACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 792 Query 183909 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183968 |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 793 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 852 Query 183969 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 184028 ||| | ||| | | || |||| | | || || || || || || ||||| ||||| Sbjct 853 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGA 912 Query 184029 TTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAA 184088 || || ||| || ||| | ||||| |||||||| ||||||||||| |||||||| || Sbjct 913 CTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 972 Query 184089 GAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGA 184148 || || || | || ||||| | ||||| ||| | || || ||||| || ||||| Sbjct 973 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1032 Query 184149 GAA 184151 || Sbjct 1033 AAA 1035 >seq2823 Length=1025 Score = 408 bits (452), Expect = 5e-109 Identities = 424/553 (77%), Gaps = 2/553 (0%) Strand=Plus/Plus Query 182235 GGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATG 182294 |||||||| || || || | ||||| || |||||||| || || ||||||| ||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 182295 TTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCC-ACATGTTGGGTGTAGC 182353 | || |||||||||||||||||||| |||||||| || || | ||||| | ||||| || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 182354 AGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 182413 |||||||| || ||||| || || ||||| ||||| ||||||||||| || ||| | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 190 Query 182414 CGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGA 182473 || | || || || || | || || || | ||||||| ||||||||||| || Sbjct 191 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 250 Query 182474 AGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 182533 ||| |||||||| ||||| || || ||||| || || || || |||||||||||||| || Sbjct 251 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 310 Query 182534 ATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAAT 182593 |||||||| || ||||| || ||||||||| | ||||| |||||||| || || || Sbjct 311 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 370 Query 182594 CTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAA 182653 |||||||||||| | ||| || ||| ||||| |||||| | || ||||| || ||||| Sbjct 371 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 430 Query 182654 CCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCG 182713 || || | ||||| |||| |||||||| |||| |||||||| ||| | | ||||| Sbjct 431 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 490 Query 182714 TG-CTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATC 182772 | || |||||||||||||||||||||||| ||||| || || || ||||| ||||| | Sbjct 491 CGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACC 550 Query 182773 TTGCTGCTGCTGA 182785 | ||||||| ||| Sbjct 551 TAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 363 bits (402), Expect = 2e-95 Identities = 444/599 (74%), Gaps = 9/599 (2%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 597 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 538 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || |||||||| | || |||||||| || ||||| || ||||| Sbjct 537 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 479 Query 181934 CCGCG-AACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTG 181992 || | |||| || |||| || | | || || ||||| || || || ||||| || Sbjct 478 TCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 419 Query 181993 TCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTG 182052 |||| | || || || ||| | ||||| |||||||| |||||||| || || ||| Sbjct 418 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 359 Query 182053 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCA 182112 |||| ||| | || |||||||| |||| | || ||||| | |||||| | | || Sbjct 358 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG-- 301 Query 182113 TCTACGC---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCT 182169 | || || ||| ||||| ||||||||||||||| || ||| | |||||||| || | Sbjct 300 TGTA-GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTT 242 Query 182170 GGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATC 182229 |||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| | Sbjct 241 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACC 182 Query 182230 CTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACT 182289 | | |||||||| || || || | ||||| || |||||||| || || ||||||| Sbjct 181 CAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACT 122 Query 182290 ATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTG 182349 ||| | || |||||||||||||||||||| |||||||| || || |||||| | |||| Sbjct 121 TCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTG 62 Query 182350 TAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCT 182408 | || |||||||| || ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 61 TGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCT 3 >seq929 Length=1222 Score = 329 bits (364), Expect = 4e-85 Identities = 418/568 (74%), Gaps = 9/568 (2%) Strand=Plus/Plus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 658 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 717 Query 181875 GCAACCATCTGT-TTCATCGTT-GCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTA 181932 ||||| ||||| || || || |||||| | || |||||||| || ||||| || |||| Sbjct 718 GCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTA 776 Query 181933 TCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTG 181992 | || ||||| || |||| || | | || || ||||| || || || ||||| || Sbjct 777 TTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 836 Query 181993 TCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTG 182052 |||| | || || || ||| | ||||| |||||||| |||||||| || || ||| Sbjct 837 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 896 Query 182053 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCA 182112 |||| ||| | || |||||||| |||| | || ||||| | |||||| | | || Sbjct 897 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG-- 954 Query 182113 TCTACGC---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCT 182169 | || || ||| ||||| ||||||||||||||| || ||| | |||||||| || | Sbjct 955 TGTA-GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTT 1013 Query 182170 GGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATC 182229 |||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| | Sbjct 1014 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACC 1073 Query 182230 CTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACT 182289 | | |||||||| || || || | ||||| || |||||||| || || ||||||| Sbjct 1074 CAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACT 1133 Query 182290 ATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTG 182349 ||| | || |||||||||||||||||||| |||||||| || || |||||| | |||| Sbjct 1134 TCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTG 1193 Query 182350 TAGCAGGTGTATTCGGTGGTTCACTGTT 182377 | || |||||||| || ||||| || || Sbjct 1194 TGGCTGGTGTATTTGGCGGTTCCCTATT 1221 >seq990 Length=1011 Score = 217 bits (240), Expect = 2e-51 Identities = 295/406 (73%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 183797 ATACATTGTATGAAGAT-GGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAA 183855 |||| || | ||||||| || || |||| |||||| || ||| | | |||||| Sbjct 1011 ATACTTTATTTGAAGATTGGTGATGGTGCAAT-ACATTCCGTGCTTTTAACCCAACTCAA 953 Query 183856 GAAGAAGAGACGTATTCTATGGTTACAGCGAATCG-TTTCTGGTCACAAATCTTCGGGGT 183914 | ||||| || ||||| ||||| || || || || ||| ||||| |||||||| ||||| Sbjct 952 GCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTGGTCCCAAATCTTTGGGGT 893 Query 183915 TGCGTTTAGCAATAAGCGTT-GGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTC 183973 ||| ||| |||||| |||| |||| || ||||||||||| ||||| || || | ||| Sbjct 892 TGCTTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 833 Query 183974 TTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTG 184033 | ||| | | || |||| | | || || || || || || ||||| ||||| || | Sbjct 832 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCG 773 Query 184034 TAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACA 184093 | ||| || ||| | ||||| |||||||| ||||||||||| |||||||| || || | Sbjct 772 TTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATA 713 Query 184094 TACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATT 184153 | || | || ||||| | ||||| ||| | || || ||||| || ||||| || Sbjct 712 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 653 Query 184154 TTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 652 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 607 >seq2704 Length=1012 Score = 163 bits (180), Expect = 3e-35 Identities = 211/289 (73%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 699 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 758 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 |||| | ||||| || || |||||||| | || |||||||| || ||||| || ||||| Sbjct 759 GCAA-CTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 817 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || |||| || | | || || ||||| || || || ||||| || | Sbjct 818 TCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTAT 877 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 ||| | || || || ||| | ||||| |||||||| |||||||| || || |||| Sbjct 878 CCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGA 937 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTC 182102 ||| ||| | || |||||||| |||| | || ||||| | |||||| Sbjct 938 TGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTC 986 >seq1012 Length=1043 Score = 134 bits (148), Expect = 2e-26 Identities = 182/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 183946 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTT 184005 |||||||| ||||| || || | ||| | ||| | | || |||| | | || || Sbjct 1043 TTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTG 984 Query 184006 GCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCA 184065 || || || || ||||| ||||| || || ||| || ||| | ||||| |||||||| Sbjct 983 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCT 924 Query 184066 GAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTA 184125 ||||||||||| |||||||| || || || || | || ||||| | ||||| ||| | Sbjct 923 GAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATG 864 Query 184126 GCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGC 184185 || || ||||| || ||||| || ||||||| || |||||||| |||| | || Sbjct 863 GCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGA 804 Query 184186 AATGCTCTTTGATG 184199 || ||||||| ||| Sbjct 803 AACGCTCTTTAATG 790 >seq672 Length=1075 Score = 114 bits (126), Expect = 2e-20 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 182668 ATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTA 182727 || |||| |||||||| |||| |||||||| ||| | | ||||| ||| |||||||| Sbjct 1075 ATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTA 1016 Query 182728 TGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTGCTGCTGA 182785 |||||||||||||||| ||||| || || || ||||| ||||| || ||||||| ||| Sbjct 1015 TGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611672694382400