Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq4 96.9 2e-15 seq6 95.1 8e-15 seq2 93.3 3e-14 seq1 86.0 4e-12 seq5 84.2 1e-11 >seq3 Length=27879571 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| ||| ||||| ||||| ||||| | ||| | || |||| || Sbjct 184217 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCCTCA 184158 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || | ||||||||| | || | ||||||||||| Sbjct 184157 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 184098 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | ||| | ||| || || | ||| ||||| ||| Sbjct 184097 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAAGGTGATGGTCTTT 184038 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || |||||||||||| Sbjct 184037 CCTGTCAAGGTCTTGACGAAGATCTGCATA 184008 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||| || ||||| | |||| | ||| |||| || ||||| ||||| ||||| Sbjct 13656415 TTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAA 13656356 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| |||||||||| | || | || ||||| || || || |||||| | Sbjct 13656355 AATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGAC--A 13656298 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| ||| | ||||| || | ||| ||||| || || |||||||||| Sbjct 13656297 T--TGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCT 13656240 Query 34966 TCACAAAGATCTGCAT 34981 | || ||||||||||| Sbjct 13656239 TAACGAAGATCTGCAT 13656224 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || || |||| ||| || || |||||||| || || | ||| | || |||| || Sbjct 13656660 ACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTCA 13656601 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | ||||| || || | Sbjct 13656600 AGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGA 13656541 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 13656540 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTC 13656481 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||||||||||||||| ||||| Sbjct 13656480 CCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||| |||||||| ||||| | ||| |||| | || || Sbjct 13774436 ACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCCTCG 13774377 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | |||||||||| | || | ||||||||||| Sbjct 13774376 AGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 13774317 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | ||| | ||||| |||| ||| || || || Sbjct 13774316 ATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCTTG 13774257 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 13774256 CCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || |||| || ||||| || |||||||| Sbjct 183971 TCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATCCTCAAGCTGCTTCCCGGCAAAG 183912 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || |||||||| |||||| |||||| Sbjct 183911 ATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTG 183852 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| ||||| ||||| || | |||||| ||| Sbjct 183851 TCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTGACA 183792 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 183791 AAGATCTGCATA 183780 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||| || || || || || | || | || |||| || Sbjct 13774664 ACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCCATCCTCT 13774605 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || | ||||| ||| | || | ||||||||||| | Sbjct 13774604 AGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGA 13774545 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| ||| | |||||| || | || ||||| Sbjct 13774544 ATCTTTGCCTTGAC--AT--TATCGATTGTGTCAGAGCTCTCAACCTCCAATGTGATGGT 13774489 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| |||||||||||||| Sbjct 13774488 CTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || ||| ||||| ||||| || || | ||| | | |||| Sbjct 13841544 CAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGTGACCATC 13841603 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || |||||||| || ||||| || || | ||||||||| | || | ||||||||||| Sbjct 13841604 CTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 13841663 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATT-CACCGG---CCTCAACATCGACGGTTA 34944 |||||| ||||| || |||| ||| | ||| |||||| || | || | Sbjct 13841664 CTGAATCTTTGCCTTGAC--AT--TATCAATTGTATCGGAACTCTCAACCTCCAAAGTGA 13841719 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || ||||| ||||| |||||||| ||||| Sbjct 13841720 TTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| ||||| || ||| || ||||| || ||||| |||| | || |||| || Sbjct 13842003 AACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACAAGGGTGTGTCCATCCTC 13842062 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || | ||| ||||| | || | || ||||||||| Sbjct 13842063 AAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCCTTGTCGTG 13842122 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 || || |||||| || |||| || ||| | ||||| || | ||| |||| Sbjct 13842123 GATTTTGGCTTTGAC--AT--TATCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGG 13842178 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATAT 34983 | || || ||||||||||| || ||||||||||||| Sbjct 13842179 TCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATAT 13842214 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || ||||| || || || | || | || |||| || ||||| || || |||||| Sbjct 13775330 TCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAAT 13775271 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| |||||| ||| || || Sbjct 13775270 ATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCAC--AT 13775213 Query 34911 GCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| ||| | | | ||| || || | ||||||||| ||||| ||||| ||||| Sbjct 13775212 --TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTT 13775155 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 13775154 CACAAAGATCTGCAT 13775140 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| ||||||||||||||||||| || | ||| | || ||||| || || || Sbjct 9477428 AATCATAGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATT 9477487 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | |||| |||| |||| |||| ||| || || ||||| || |||| ||||| Sbjct 9477488 ATAATCTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTG 9477547 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || |||||||| Sbjct 9477548 ATCTGGAGGGATGCCTTCCTTGTC 9477571 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || | ||| | | |||| || ||||| Sbjct 13657339 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTG 13657280 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || ||||| || | ||||||||| | || | |||||||| || |||||| Sbjct 13657279 CTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTT 13657220 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| || | |||| || ||| || || | |||||||| || || || Sbjct 13657219 GGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCTGT 13657160 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||||||||||||| Sbjct 13657159 CAGAGTTTTGACAAAGATCTGCATA 13657135 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||| || |||||||| ||||| | ||| ||| | | || || Sbjct 13774893 AACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTC 13774834 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 13774833 CAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 13774774 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||| || | || | ||| | || || || | || || || || Sbjct 13774773 GATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTT 13774714 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||||||||| ||||| Sbjct 13774713 CCCAGTAAGGGTCTTCACAAAGATTTGCAT 13774684 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | |||| |||| |||| || ||||| || || ||||| Sbjct 183743 TCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAG 183684 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 183683 ATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTG 183624 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| || || || || ||||| || ||||| Sbjct 183623 TCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACG 183564 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 183563 AAAATTTGCAT 183553 >seq4 Length=23292877 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 18773384 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 18773325 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 18773324 ATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 18773265 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| ||||| || ||||| || || ||||| Sbjct 18773264 TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACG 18773205 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 18773204 AAGATCTGCAT 18773194 >seq6 Length=38222195 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||||||||| || || | ||| | || | || || Sbjct 34519612 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 34519671 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | | ||||||||| | || | ||| ||||| || Sbjct 34519672 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGG 34519731 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| |||||| || |||| || | ||| || |||||| || | || ||||| Sbjct 34519732 ATCTTGGCTTTGAC--AT--TATCAATGGTATCCGAGCTCTCAACCTCCAAAGTGATGGT 34519787 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||||||||||| |||||||| Sbjct 34519788 CTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 || ||||| ||||| ||||| | |||| | || | || || ||||| |||||||| | Sbjct 34538217 TCCTTCTGGATGTTGTAGTCGGCCAAAGTC--CGGCCGTCCTCGAGCTGCTTTCCGGCGA 34538274 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 | || || | |||||||| | || | ||||||||||| ||||| |||||| Sbjct 34538275 AGATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGT 34538334 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | || | |||||| |||| ||| ||||| || || || || || |||| Sbjct 34538335 TGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCA 34538394 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 34538395 CGAAGATCTGCAT 34538407 >seq2 Length=33308843 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| || |||| || | | |||| || ||||| || || |||||| Sbjct 6938413 TCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAAT 6938472 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || |||||||| |||||| ||| || || Sbjct 6938473 ATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCAC--AT 6938530 Query 34911 GCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| ||| | | | ||| || || | ||||||||| ||||| || || ||||| Sbjct 6938531 --TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCTT 6938588 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 6938589 CACAAAGATCTGCAT 6938603 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || || || || || || || || | |||| | || |||| || Sbjct 6939079 ACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGCAAGGGTGCGGCCATCCTCT 6939138 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || | ||||| ||| | || | ||||||||||| Sbjct 6939139 AGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGTATGCCCTCCTTGTCCTGG 6939198 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| ||| |||||| || | || ||||| Sbjct 6939199 ATCTTTGCCTTGAC--AT--TATCGATTGTATCAGAACTCTCAACCTC-AATGTGATGGT 6939253 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| |||||||||||||| Sbjct 6939254 CTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||||| || ||||| || || | || | || | || || Sbjct 6939305 AACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTATTCAGCGAGTGTCCGCCCGTCCTC 6939364 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || | ||| |||| | || | ||||||||||| Sbjct 6939365 AAGCTGCTTGCCAGCAAAGATCAGCCTTTGTCGGTCCGGGGGAATTCCCTCCTTGTCTTG 6939424 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | ||| | ||||| || | ||| ||||| || Sbjct 6939425 GATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTT 6939484 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 6939485 GCCTGTGAGGGTTTTCACAAAGATCTGCAT 6939514 >seq1 Length=22681039 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || |||||||||||||| || Sbjct 22555169 TCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 22555228 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || || || Sbjct 22555229 ATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCAC--AT 22555286 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || || ||| || || | || || || || ||||| || || || Sbjct 22555287 --TATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTT 22555344 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 22555345 CACGAAGATCTGCATCTT 22555362 >seq5 Length=29328693 Score = 84.2 bits (92), Expect = 1e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || | || || ||||| ||||||||||| Sbjct 19804394 TCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 19804335 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | || || ||| | || | ||||||||||| ||||| ||||||| Sbjct 19804334 ATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 19804275 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| | ||| || || || || ||||||||| Sbjct 19804274 TCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGACGGTCTTGCCGGTAAGCGTCTTCACA 19804215 Query 34971 AAGATCTGC 34979 ||||||||| Sbjct 19804214 AAGATCTGC 19804206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324621540673344