Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq3048 695 0.0 seq2811 473 1e-128 seq2823 423 2e-113 seq838 423 2e-113 seq929 392 4e-104 seq990 188 8e-43 seq2704 183 3e-41 seq960 87.8 2e-12 >seq3048 Length=155691 Score = 695 bits (770), Expect = 0.0 Identities = 757/996 (76%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||| ||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 1417 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1358 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || ||||| ||| ||| ||| | Sbjct 1357 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCAC 1300 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || | | || ||||||| Sbjct 1299 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 1240 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| | Sbjct 1239 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 1180 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| || | | || |||||| | ||||||||||| |||| | || ||| Sbjct 1179 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 1120 Query 161174 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 161231 | | |||||| | |||| | || |||| | ||||||||||||||||||||| || Sbjct 1119 TTCTACACTTCTTACTTGGTGTAGCT-TGCT-ATATGGGTCGTGAGTGGGAACTTAGTTT 1062 Query 161232 CCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 161291 ||||||||| ||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 1061 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1002 Query 161292 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 161351 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| || Sbjct 1001 TGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 942 Query 161352 CATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCA 161411 ||||||||||| ||||||| |||| |||| |||||||| ||||||||||| || ||||| Sbjct 941 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 882 Query 161412 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 161471 ||| || || ||||| || || || ||||| ||||||||||| || |||||||| ||||| Sbjct 881 CCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCA 822 Query 161472 CGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTA 161531 ||||| |||| |||||| || | | |||||||| ||||| || || || | Sbjct 821 TGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 762 Query 161532 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTT 161591 ||||||| ||||||||||| ||||| ||||| || ||||| || || || || || || Sbjct 761 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 702 Query 161592 CGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCT 161651 || || |||| |||||||| ||| |||||||| || || || | ||||||||| | Sbjct 701 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTT 642 Query 161652 TGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATT 161711 |||||||||||||| || || ||||||||||| || | || | ||||| ||||| || Sbjct 641 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTT 582 Query 161712 CAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAA 161771 |||| | |||||||| || ||||| || ||| | ||||||||||| ||| || || || Sbjct 581 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 522 Query 161772 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAA 161831 || ||||| || || ||||||| ||| |||||| |||||||| ||||| || || || Sbjct 521 TACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAA 462 Query 161832 TGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||||| || |||||||| ||||| ||||||| ||| Sbjct 461 TGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 426 Score = 515 bits (570), Expect = 4e-141 Identities = 724/1014 (71%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||||||||||||||| || |||||||| Sbjct 33671 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 33730 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||| ||| | ||| | ||||||||| | || || || || || Sbjct 33731 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 33790 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || |||||||| || ||| | || ||||||||| | || ||| ||||| | Sbjct 33791 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 33850 Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356 || || |||||||| || || || || | | | || ||| | || | ||||||||| Sbjct 33851 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 33910 Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416 ||||| | ||||| || || | || ||||| ||| | || || || ||||| ||||| Sbjct 33911 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTC 33970 Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476 || || ||||| || || | ||| |||||||||||| | || || |||||||| || ||| Sbjct 33971 GCTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 34030 Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535 || || | | || ||||| ||||| ||||| ||||| ||||| |||||||| || || Sbjct 34031 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 34089 Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595 | ||| || || || ||||| | || || || |||||||| || || || || Sbjct 34090 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 34149 Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655 || ||||| || || |||||| | ||||| |||||||||| ||||| ||||| | || Sbjct 34150 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34209 Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715 || ||||| |||||||| || || || | | || | ||| || | | |||||||| Sbjct 34210 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34269 Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775 ||| | || || |||||||| | | |||||||| || ||||| || || || Sbjct 34270 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34329 Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835 ||| || | || || | |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 34330 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTC 34389 Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895 || || || || |||||||| || || |||||||| |||||||||||| | ||||| Sbjct 34390 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 34449 Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955 || || | ||| | |||| ||| || | || | | || || || || || || || Sbjct 34450 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACG 34509 Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015 ||| || ||||| || ||||| ||| | || || || ||||| ||||| |||||||| || Sbjct 34510 TGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 34569 Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075 ||| || || || ||||| | || ||||| |||| || ||| | || | || || Sbjct 34570 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 34629 Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 |||||||| ||| || | |||||||| ||||| | || | || |||||||| Sbjct 34630 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34683 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||||||| Sbjct 67746 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCGAAT 67687 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 67686 CCTGTCATCCCTACCTAT 67669 >seq2811 Length=1036 Score = 473 bits (524), Expect = 1e-128 Identities = 692/973 (71%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||||||||||||||| || |||||||| Sbjct 65 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 124 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||| ||| | ||| | ||||||||| | || || || || || Sbjct 125 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 184 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || |||||||| || ||| | || ||||||||| | || ||| ||||| | Sbjct 185 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 244 Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356 || || |||||||| || || || || | | | || ||| | || | ||||||||| Sbjct 245 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 304 Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416 ||||| | ||||| || || | || ||||| ||| | || || || ||||| |||| | Sbjct 305 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG 364 Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476 | || ||||| || || | ||| |||||||||||| | || || |||||||| || ||| Sbjct 365 -CTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 423 Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535 || || | | || ||||| ||||| ||||| ||||| ||||| |||||||| || || Sbjct 424 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 482 Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595 | ||| || || || ||||| | || || || |||||||| || || || || Sbjct 483 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 542 Query 162596 GGTCGC-AGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAA 162654 || || ||| || || |||||| | ||||| |||||||||| ||||| ||||| | | Sbjct 543 TGTAGCTAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 602 Query 162655 ATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTC 162714 | || ||||| |||||||| || || || | | || | ||| || | | ||||||| Sbjct 603 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTC 662 Query 162715 ATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAG 162774 |||| | || || |||||||| | | |||||||| || ||||| || || | Sbjct 663 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 722 Query 162775 CATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGT 162834 | ||| || | || || | |||||||| ||||| ||||| || || |||||||| |||| Sbjct 723 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGT 782 Query 162835 CACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTG 162894 | || || || || |||||||| || || |||||||| |||||||||||| | |||| Sbjct 783 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 842 Query 162895 TTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTC 162954 | || || | ||| | |||| ||| || | || | | || || || || || || | Sbjct 843 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTAC 902 Query 162955 GTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGT 163014 |||| || ||||| || ||||| ||| | || || || ||||| ||||| |||||||| | Sbjct 903 GTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTT 962 Query 163015 TCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACC 163074 |||| || || || ||||| | || ||||| |||| || ||| | || | || | Sbjct 963 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1022 Query 163075 AACCTCATGAGAA 163087 | |||||||| || Sbjct 1023 AGCCTCATGAAAA 1035 >seq2823 Length=1025 Score = 423 bits (468), Expect = 2e-113 Identities = 427/553 (77%), Gaps = 2/553 (0%) Strand=Plus/Plus Query 161317 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATG 161376 |||||||| || ||||| | |||||||| || ||||||||||| ||||||| |||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 161377 CTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCC-ATATGCTCGGCGTAGC 161435 |||| |||||||| ||||||||||| || |||||||| || | | ||||| || || || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 161436 AGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCT 161495 ||||| ||||||||||| || |||||||| ||||| ||||| |||| |||||| | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 190 Query 161496 GGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 161555 | | | |||||||| ||||| || || || | ||||||| ||||||||||| || Sbjct 191 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 250 Query 161556 AGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGC 161615 ||| ||||| || ||||| || || || || || || || || |||| |||||||| || Sbjct 251 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 310 Query 161616 TTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCAT 161675 | |||||||| || || || | ||||||||| | |||||||||||||| || || || Sbjct 311 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 370 Query 161676 CTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAA 161735 ||||||||| || | || | ||||| ||||| |||||| | |||||||| || ||||| Sbjct 371 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 430 Query 161736 CCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCG 161795 || ||| | ||||||||||| ||| || || || || ||||| || || ||||||| Sbjct 431 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 490 Query 161796 TG-CTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACC 161854 | || |||||| |||||||| ||||| || || |||||||| || |||||||| |||| Sbjct 491 CGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACC 550 Query 161855 TTGCTGCTGCTGA 161867 | ||||||| ||| Sbjct 551 TAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 423 bits (468), Expect = 2e-113 Identities = 472/620 (76%), Gaps = 9/620 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||| ||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 618 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 559 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || ||||| ||| ||| ||| | Sbjct 558 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCAC 501 Query 160994 CCCCTGTGGACATCGACGGCATTCGTG-AACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052 | || || || || || || ||||||| |||| || |||| || | | || |||||| Sbjct 500 CTCCGGTAGATATTGATGGTATTCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAAC 441 Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112 || || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| Sbjct 440 AATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 381 Query 161113 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 161172 || |||||||| || | | || |||||| | ||||||||||| |||| | || || Sbjct 380 ATATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATT 321 Query 161173 GTGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTT 161230 || | |||||| | |||| | || |||| | ||||||||||||||||||||| || Sbjct 320 GTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ATATGGGTCGTGAGTGGGAACTTAGTT 263 Query 161231 ACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 161290 ||||||||| ||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 262 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 203 Query 161291 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 161350 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| | Sbjct 202 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 143 Query 161351 GCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGC 161410 | ||||||||||| ||||||| |||| |||| |||||||| ||||||||||| || |||| Sbjct 142 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 83 Query 161411 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGC 161470 |||| || || ||||| || || || ||||| ||||||||||| || |||||||| |||| Sbjct 82 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGC 23 Query 161471 ACGGTTCGCTGGTTACCTCT 161490 | ||||| |||| |||||| Sbjct 22 ATGGTTCTTTGGTAACCTCT 3 >seq929 Length=1222 Score = 392 bits (434), Expect = 4e-104 Identities = 447/590 (76%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||| ||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 637 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 696 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATT-GCCTTCGTTGGTGCT 160992 ||||| |||| ||| | | | || || | ||| || || ||| || ||| ||| ||| Sbjct 697 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCA 754 Query 160993 CCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052 || || || || || || || ||||||||||| || |||| || | | || |||||| Sbjct 755 CCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAAC 814 Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112 || || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| Sbjct 815 AATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 874 Query 161113 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 161172 || |||||||| || | | || |||||| | ||||||||||| |||| | || || Sbjct 875 ATATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATT 934 Query 161173 GTGTTCCACTTCCTGATTG--GCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTT 161230 || | |||||| | ||| | | || ||| || ||||||||||||||||||||| || Sbjct 935 GTTCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTT 992 Query 161231 ACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 161290 ||||||||| ||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 993 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 1052 Query 161291 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 161350 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| | Sbjct 1053 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 1112 Query 161351 GCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGC 161410 | ||||||||||| ||||||| |||| |||| |||||||| ||||||||||| || |||| Sbjct 1113 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 1172 Query 161411 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTC 161460 |||| || || ||||| || || || ||||| ||||||||||| || ||| Sbjct 1173 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 188 bits (208), Expect = 8e-43 Identities = 258/358 (72%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCT-G 162832 || ||| || | || || | |||||||| ||||| ||||| || || |||||||| | | Sbjct 970 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTG 911 Query 162833 GTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTT-GGTTGCATTTCTTTATGCTCT 162891 ||| || || || || |||||||| || || |||| |||| |||||||||||| | | Sbjct 910 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTAT 851 Query 162892 TTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATC 162951 |||| || || | ||| | |||| ||| || | || | | || || || || || | Sbjct 850 TTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACC 791 Query 162952 TTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGA 163011 | ||||| || ||||| || ||||| ||| | || || || ||||| ||||| ||||||| Sbjct 790 TACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGA 731 Query 163012 CGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGG 163071 | ||||| || || || ||||| | || ||||| |||| || ||| | || | | Sbjct 730 CTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 671 Query 163072 ACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | || |||||||| ||| || | |||||||| ||||| | || | || |||||||| Sbjct 670 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 613 >seq2704 Length=1012 Score = 183 bits (202), Expect = 3e-41 Identities = 235/319 (74%), Gaps = 4/319 (1%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||| ||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 678 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 737 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || ||||| ||| ||| ||| | Sbjct 738 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCAC 795 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || | | || ||||||| Sbjct 796 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 855 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| | Sbjct 856 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 915 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| || | | || |||||| | ||||||||||| |||| | || ||| Sbjct 916 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 975 Query 161174 TGTTCCACTTCCTGATTGG 161192 | | |||||| | |||| Sbjct 976 TTCTACACTTCTTACTTGG 994 >seq960 Length=1061 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||||||| Sbjct 988 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCGAAT 929 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 928 CCTGTCATCCCTACCTAT 911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547726330831680