Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3048 601 5e-167 seq2811 491 6e-134 seq2823 372 4e-98 seq838 361 7e-95 seq929 349 5e-91 seq2704 168 9e-37 seq990 158 2e-33 seq5 105 9e-18 >seq3048 Length=155691 Score = 601 bits (666), Expect = 5e-167 Identities = 718/968 (74%), Gaps = 6/968 (1%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| || || | || |||||||| || || | ||| || || || || | Sbjct 426 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 485 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 |||||| ||| ||||||| || || |||||||| || | |||||||| || |||| Sbjct 486 CCAAGATTAGCGCGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 545 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| |||||||| || ||||| || | ||||||||||| ||| | ||| | Sbjct 546 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 605 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 |||||||||||||| || || || ||||| ||||| | ||||||||| || ||||| || Sbjct 606 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAA 665 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 666 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 725 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || ||||| ||||| ||||||||||| | ||||| | || || ||| |||| || Sbjct 726 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 785 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| || |||| | || ||||||||| ||| || || || Sbjct 786 GTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCG 845 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 || ||||| ||||| ||||| |||||||| || |||||||||||||| ||||| || || Sbjct 846 CCAAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCT 905 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| |||| |||| |||||||||||||| || ||||||||| | || || || Sbjct 906 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAG 965 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||| | || |||| | ||| || ||| | ||||| || || ||||| ||| Sbjct 966 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 1025 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| || |||||||| | ||| | |||||||||||||| ||| Sbjct 1026 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 1085 Query 27385 ATATAAGCATAG--ATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGT 27442 |||| |||| || | || | | |||||| | || | || | |||| ||||||| Sbjct 1086 ATAT-AGCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGGCCACCGT 1143 Query 27443 TATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTG 27502 | || ||||| ||||| | || || |||||||| |||||||| ||||| | ||| || | Sbjct 1144 TGTATAACCATTCATCAACAGAAGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAG 1203 Query 27503 CATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAG 27562 | ||| | |||| || ||||| ||||| || ||||| || || | | || |||| Sbjct 1204 CTGCAGAAGTAGGGATAATGGCACCGGAAATAATATTGTTTCCGTAAAGTAAAGATCCAG 1263 Query 27563 CAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGA 27622 ||| |||||||||||||| |||||||| || || ||||| || ||||| || | ||| | Sbjct 1264 AAACAGGTTCACGAATACCATCAATATCTACCGGAGGTGCAGCAATGAAAGCAATAATAA 1323 Query 27623 A-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATAC 27681 | |||| |||||| | || | || |||||||||| ||||| ||||| |||| || Sbjct 1324 ATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 1382 Query 27682 AAACGGTT 27689 | |||||| Sbjct 1383 AGACGGTT 1390 Score = 509 bits (564), Expect = 2e-139 Identities = 726/1019 (71%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | || || | |||||| | || |||||| || || | Sbjct 34688 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 34629 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 34628 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 34569 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | | |||||| || || || || || ||| || || ||||| |||| Sbjct 34568 AAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCCTGAGAAACGAAGTCATAGGCAC 34509 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || || || || || | | |||| || | | ||| | ||| | || || | Sbjct 34508 GTAGGTTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 34449 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 34448 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 34389 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 34388 ACCAAAAGCGGTTAGCGGTGACCATGGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 34329 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || || ||| | |||| Sbjct 34328 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 34269 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | | || || | |||| | |||||||||||||||||||| || |||| Sbjct 34268 GAATAGCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGT 34209 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || || || |||| Sbjct 34208 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 34149 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| ||||| || | ||||| || ||||||||||| | Sbjct 34148 CAAAACTGGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAGGAATACAGAAA 34089 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| ||||| || || ||||| ||||| || || || | | || ||| Sbjct 34088 CAAAAACAGCAATTGGACCGGAGAATGCAATTGCATTATAAGGTCGTAATTGAAC-AGAT 34030 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| ||||||||||| |||||||| ||| | || || ||||| ||||| Sbjct 34029 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGCAGAGCG 33970 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||||| ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 33969 ACAAAGGTCCACAGACCGCCCAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 33910 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | ||| || | | | || |||||| || || || || || || Sbjct 33909 CCCCATAGTAACAACAAAGAGTGTGCTAAACTGTTAGCAGGGGTGGAAACTGCGGCGGTT 33850 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | |||||| ||| || | ||||||||| || | ||||||||| ||||| || ||| Sbjct 33849 AAGAAGTTACAACCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACA 33790 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 33789 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGG 33730 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || || || |||| | |||||| |||| || ||||| Sbjct 33729 CCAGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 33671 >seq2811 Length=1036 Score = 491 bits (544), Expect = 6e-134 Identities = 696/973 (72%), Gaps = 4/973 (0%) Strand=Plus/Minus Query 23433 TTTTCGTGTGGTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATA 23492 ||||| || || || || || | |||||| |||| | || | ||| || | |||| Sbjct 1035 TTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATA 976 Query 23493 TTTTTCGTGTAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACA 23552 ||||| |||||||| |||||| | | |||||| || || || || || ||| || Sbjct 975 TTTTTGGTGTAGAAAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCCTGAGAAACG 916 Query 23553 AAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGA 23612 || ||||| ||||| || || || || || || | | |||| || | | ||| | | Sbjct 915 AAGTCATAGGCACGTAGGTTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAA 856 Query 23613 CCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACC 23672 || | || || ||||| ||||||||||| || |||||||| |||||| ||| |||||| Sbjct 855 CCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACC 796 Query 23673 CCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGA 23732 || |||||||| |||||||| || || || || ||||| ||||| || || || | ||| Sbjct 795 CCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATGGAATAAGTTTCTTCAGCTTGA 736 Query 23733 GTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCG 23792 || | | || || || || ||||| || ||||||||| | | ||||| || Sbjct 735 GTTGGGTTAAAAGCACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCT 676 Query 23793 ACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATC 23852 || ||| | ||||||||||| | | || || | |||| | ||||||||||||||| Sbjct 675 ACGGTAGCACCATGAATAGCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATC 616 Query 23853 ATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAA 23912 ||||| || ||||| | ||||| |||||||| || |||| ||||| | ||| | || Sbjct 615 ATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAAT 556 Query 23913 ATCGC-CGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGAT 23971 || || || ||||| ||||| ||||||||||||||| ||||| || | ||||| || Sbjct 555 ATAGCTAGCTACACCAAAACTGGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAAT 496 Query 23972 GAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACG 24031 ||||||||||| || || |||||||| ||||| || || ||||| ||||| || || || Sbjct 495 CAGGAATACAGAAACAAAAACAGCAATTGGACCGGAGAATGCAATTGCATTATAAGGTCG 436 Query 24032 GATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGG 24090 | | || ||| || || |||||||| ||||||||||| |||||||| ||| | || | Sbjct 435 TAATTGAA-CAGATCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAG 377 Query 24091 CACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCC 24150 | ||||| ||||| |||||| ||| || || || | ||| ||| || ||| || | Sbjct 376 CGCCGTGCAGAGC-GCAAAGGTCCACAGACCGCCCAATTGACACCAACGAGTAAAATCTC 318 Query 24151 CTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCG 24210 |||| | ||||||||||| |||| | | ||| || | | | || |||||| || | Sbjct 317 CTTGTGCTTCAGGACCCCATAGTAACAACAAAGAGTGTGCTAAACTGTTAGCAGGGGTGG 258 Query 24211 AGACAGCTGCCGTAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGT 24270 | || || || || | |||||| ||| || | ||||||||| || | ||||||||| | Sbjct 257 AAACTGCGGCGGTTAAGAAGTTACAACCTTCCAAATAGGAACTTGCTAATCCATGGGTAT 198 Query 24271 ACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGG 24330 |||| || ||||| | ||| || || | |||||| || | || | ||| ||| | Sbjct 197 ACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAG 138 Query 24331 GAAGAAGTAGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGT 24390 ||| || | || ||||||||||| ||||| || || || |||| | |||||| | Sbjct 137 GAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCAT 78 Query 24391 CCAAGATGTCAAA 24403 ||| || ||||| Sbjct 77 CCATAATATCAAA 65 >seq2823 Length=1025 Score = 372 bits (412), Expect = 4e-98 Identities = 416/553 (75%), Gaps = 2/553 (0%) Strand=Plus/Minus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| || || | || |||||||| || || | ||| || || || || | Sbjct 563 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 504 Query 26785 CCAAGACCAG-CACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATC 26843 |||||| || | ||||||| || || |||||||| || | |||||||| || ||| Sbjct 503 CCAAGATTAGTCGCGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATC 444 Query 26844 AATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAG 26903 || ||||| |||||||| || ||||| || | ||||||||||| ||| | ||| | Sbjct 443 AACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAA 384 Query 26904 TGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGA 26963 |||||||||||||| || || || ||||| ||||| | ||||||||| || ||||| || Sbjct 383 AGCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGA 324 Query 26964 GTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGAT 27023 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 323 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGAT 264 Query 27024 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGT 27083 || ||||| ||||| ||||||||||| | ||||| | || || ||| |||| || Sbjct 263 ATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 204 Query 27084 CGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCC 27143 || || | || | ||| || |||| | || ||||||||| ||| || || || Sbjct 203 GGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACC 144 Query 27144 ACCGAATACCCCAGCAACACCGAGCATGT-GGAACGGGTGCATAAGGATATTGTGTTCTG 27202 || ||||| ||||| ||||| ||||||| | || |||||||||||||| ||||| || | Sbjct 143 GCCAAATACACCAGCCACACCTAGCATGTAGAAATGGGTGCATAAGGATGTTGTGCTCAG 84 Query 27203 CCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGA 27262 | |||||||||| |||| |||| |||||||||||||| || ||||||||| | || || | Sbjct 83 CTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAA 24 Query 27263 AAGAACCTTGACC 27275 | |||||||| Sbjct 23 AGCTTCCTTGACC 11 >seq838 Length=1002 Score = 361 bits (400), Expect = 7e-95 Identities = 440/592 (74%), Gaps = 7/592 (1%) Strand=Plus/Plus Query 27102 AGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAAC 27161 ||| || |||| | || ||||||||| ||| || || || || ||||| ||||| || Sbjct 3 AGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCAAATACACCAGCCAC 62 Query 27162 ACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTA 27221 ||| |||||||| || |||||||||||||| ||||| || || |||||||||| |||| | Sbjct 63 ACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAA 122 Query 27222 GTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGG 27281 ||| |||||||||||||| || ||||||||| | || || || |||||||| | || Sbjct 123 GTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACCAATTGG 182 Query 27282 ATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCA 27341 |||| | ||| || ||| | ||||| || || ||||| |||||||| ||| ||||| Sbjct 183 GTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCA 242 Query 27342 TGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCATAG--ATG 27399 || |||||||| | ||| | |||||||||||||| ||||||| |||| || | Sbjct 243 AGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT-AGCA-AGCTACA 300 Query 27400 CCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCACTCATCG 27459 || | | |||||| | || | || | |||| |||||||| || ||||| ||||| Sbjct 301 CCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGGCCACCGTTGTATAACCATTCATCA 360 Query 27460 AGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGGACA 27519 | || || |||||||| |||||||| ||||| | ||| || || ||| | |||| | Sbjct 361 ACAGAAGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGGATA 420 Query 27520 ACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTT-CACGAAT 27578 | ||||| ||||| || ||||| || || | | || |||| ||| |||| ||||||| Sbjct 421 ATGGCACCGGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGGTTACACGAAT 480 Query 27579 ACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGTTGCTG 27637 ||| |||||||| || || ||||| || ||||| || | ||| || |||| |||||| | Sbjct 481 ACCATCAATATCTACCGGAGGTGCAGCAATGAAAGCAATAATAAATACAGA-AGTTGCGG 539 Query 27638 CTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTT 27689 || | || |||||||||| ||||| ||||| |||| || | |||||| Sbjct 540 TCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 591 >seq929 Length=1222 Score = 349 bits (386), Expect = 5e-91 Identities = 419/562 (75%), Gaps = 7/562 (1%) Strand=Plus/Minus Query 27132 GAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGAT 27191 ||| || || || || ||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct 1222 GAATAGGGAACCGCCAAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAGGAT 1163 Query 27192 ATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCAT 27251 ||||| || || |||||||||| |||| |||| |||||||||||||| || |||||||| Sbjct 1162 GTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCAT 1103 Query 27252 AGCATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGC 27311 | | || || || |||||||| | || |||| | ||| || ||| | ||||| || Sbjct 1102 ACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGC 1043 Query 27312 GACTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTC 27371 || ||||| |||||||| ||| ||||| || |||||||| | ||| | ||||| Sbjct 1042 AACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTC 983 Query 27372 CCACTCACGTCCCATATAAGCATAG--ATGCCGATAAGGAAGTGGAAGACTACCAGTTGG 27429 ||||||||| ||||||| |||| || | || | | |||||| | || | || | Sbjct 982 CCACTCACGACCCATAT-AGCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCA 925 Query 27430 AAAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAG 27489 |||| |||||||| || ||||| ||||| | || || |||||||| |||||||| ||| Sbjct 924 TAAGGGCCACCGTTGTATAACCATTCATCAACAGAAGCCGCTTCCCATATTGGGTAAAAG 865 Query 27490 TGGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATAC 27549 || | ||| || || ||| | |||| || ||||| ||||| || ||||| || || Sbjct 864 TGCAAACCTATAGCTGCAGAAGTAGGGATAATGGCACCGGAAATAATATTGTTTCCGTAA 805 Query 27550 ATAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATG 27609 | | || |||| ||| |||||||||||||| |||||||| || || ||||| || ||| Sbjct 804 AGTAAAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGTGCAGCAATG 745 Query 27610 AATGC-GACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGA 27667 || || | ||| || |||| |||||| | || | || |||||||||| ||||| | Sbjct 744 AAAGCTAATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAA 686 Query 27668 ACCAACCAACATACAAACGGTT 27689 |||| |||| || | |||||| Sbjct 685 ACCATCCAATGTAAAGACGGTT 664 >seq2704 Length=1012 Score = 168 bits (186), Expect = 9e-37 Identities = 195/260 (75%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 27431 AAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGT 27490 |||| |||||||| || ||||| ||||| | || || |||||||| |||||||| |||| Sbjct 963 AAGGGCCACCGTTGTATAACCATTCATCAACAGAAGCCGCTTCCCATATTGGGTAAAAGT 904 Query 27491 GGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACA 27550 | | ||| || || ||| | |||| || ||||| ||||| || ||||| || || | Sbjct 903 GCAAACCTATAGCTGCAGAAGTAGGGATAATGGCACCGGAAATAATATTGTTTCCGTAAA 844 Query 27551 TAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGA 27610 | || |||| ||| |||||||||||||| |||||||| || || ||||| || |||| Sbjct 843 GTAAAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGTGCAGCAATGA 784 Query 27611 ATGCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAAC 27669 | || | ||| || |||| |||||| | || | || |||||||||| ||||| ||| Sbjct 783 AAGCAATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAAC 725 Query 27670 CAACCAACATACAAACGGTT 27689 || |||| || | |||||| Sbjct 724 CATCCAATGTAAAGACGGTT 705 >seq990 Length=1011 Score = 158 bits (174), Expect = 2e-33 Identities = 247/351 (70%), Gaps = 2/351 (1%) Strand=Plus/Plus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | || || | |||||| | || |||||| || || | Sbjct 608 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 667 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 668 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 727 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | | |||||| || || || || || ||| || || ||||| |||| Sbjct 728 AAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCCTGAGAAACGAAGTCATAGGCAC 787 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || || || || || | | |||| || | | ||| | ||| | || || | Sbjct 788 GTAGGTTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 847 Query 23626 CAAACAACATAAAGAAGTGCAACC-AACGCTTATTGCTAAACGCAACCCCGAAGATTTGT 23684 |||| ||||||||||| || |||| |||| |||||| ||| |||||||| |||||||| Sbjct 848 CAAATAACATAAAGAAATGTAACCAAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGG 907 Query 23685 GACCAAAAA-CGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGT 23734 ||||||||| || || || || ||||| ||||| || || || | ||||| Sbjct 908 GACCAAAAAGCGGTTAGCGGTGACCATGGAATAAGTTTCTTCAGCTTGAGT 958 >seq5 Length=29328693 Score = 105 bits (116), Expect = 9e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 ||||||| |||||||||| | ||||| || ||||||||||| ||||| || | ||| Sbjct 16018002 GTTTCAAGAGTAACATCAGAGGAAGGATAGGCGACACAAGTGAGGACAAAGCCACCATCA 16018061 Query 32693 ATTTGATCATCATCCAAGAACG-ACTGATCACTTTGGTCTACTGTACCAGATACAATCTT 32751 || || ||||||| |||||| | ||| ||| ||||| || || ||| |||| ||| Sbjct 16018062 ATCTGGTCATCAT-CAAGAAAGCTCTGGTCAGACTGGTCGACGGTGCCATCAACAACCTT 16018120 Query 32752 ACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTC 32811 || || || || || |||| ||| || ||||| ||||| | || | || | || Sbjct 16018121 GCCGGCGCAGGAAGAGCAGGAACCGGCGCGACAGGAGTAAGGGAGGTCGAGACCTGCCTC 16018180 Query 32812 CTCTGCTGCATCAAGGATGTATTGATCATCAG 32843 ||| || || || || ||||| |||||||| Sbjct 16018181 CTCGGCGGCGTCGAGAATGTAGACATCATCAG 16018212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665469044663360