Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3 149 5e-31 seq2 109 4e-19 seq6 104 2e-17 seq5 102 6e-17 >seq3 Length=27879571 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| || || ||||| |||||||||||||| || || |||| || || || Sbjct 13774439 AGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCC 13774380 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||||||| | |||| |||||||| || || || || ||||| |||||| Sbjct 13774379 TCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCT 13774320 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| |||||| | || | ||||||||| ||| || || || || ||||| Sbjct 13774319 TGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTC 13774260 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | |||||| ||||| |||||||| Sbjct 13774259 TTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||| || || || ||||| || |||||||| ||||| || ||| Sbjct 13841302 CCACCGCGCAGACGAAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCA 13841361 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || ||||| ||| | ||||| ||||| || || || ||| Sbjct 13841362 AGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGA 13841421 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| |||||| | ||| ||| | || | |||||||| ||| || Sbjct 13841422 ATACCCTCCTTGTCTTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCGAC 13841480 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | | | || ||||||||||| | ||| || ||||| || ||||| Sbjct 13841481 TTCCACAATGATGGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 13841528 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| || || ||||| || |||||||| ||||| || ||| Sbjct 13657134 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 13657075 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || || || ||| | ||||| || ||||| || || ||| Sbjct 13657074 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGAGGA 13657015 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| || || || |||||| | ||| ||| | |||| |||||||| ||| || Sbjct 13657014 ATACCCTCCTTATCCTG-AATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCAC 13656956 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || |||||||| || | ||| || ||||| || ||||| Sbjct 13656955 TTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| |||||||| ||||| || ||||||||||| ||||| || | |||||| Sbjct 13656667 ACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCC 13656608 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | ||| ||||| || || || ||||||||||| Sbjct 13656607 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 13656548 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| |||| || || | || | ||||||||| || || || | |||| Sbjct 13656547 ATCCTG-AATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTA 13656489 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | || || ||||| || ||||| Sbjct 13656488 TGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||||||| || || || || || || ||||| ||||| ||| Sbjct 183779 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 183720 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||||||| | |||| | ||||| ||||| || Sbjct 183719 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 183660 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | || || | || | ||||||||| || || Sbjct 183659 ATTCCCTCCTTGTCCTG-AATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 183601 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || | |||||| || || || ||||| Sbjct 183600 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| ||||| || ||||| || ||||| || || ||||||| |||||| Sbjct 13656895 ACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCAAGAGTGCGACC 13656836 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | || | || ||||| || || ||||| |||||||| Sbjct 13656835 ATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTT 13656776 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| |||||| | || | || || ||| ||| || || | || | Sbjct 13656775 GTCCTG-AATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGA 13656717 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | ||| || ||||| || ||||| Sbjct 13656716 TTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 13656680 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || ||||| ||||| || | || | | Sbjct 13775127 ACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACC 13775068 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 13775067 ATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 13775008 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| |||||| | || | ||||| || ||| ||||| | ||| | Sbjct 13775007 GTCCTG-AATCTTTGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 13774949 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||| || || || || || ||||| || |||||| Sbjct 13774948 TAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 13774911 Score = 113 bits (124), Expect = 3e-20 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | || || |||| ||||| || || |||||||| || | || ||| Sbjct 6885924 ACGCAGAACAAGGTGCAGGTTGGACTCTTTCTGGATATTATAATCGGCCAAAGTACGACC 6885865 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || || | ||||| ||||||||||||||||| |||||||| || Sbjct 6885864 ATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTT 6885805 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || |||||||| | || | || ||||| ||||| || || || || Sbjct 6885804 ATCTTGAATCTTGGGTTTGACATTGTCAATGGTATCAGAGCTCTCTACCTCGAGGGTGAT 6885745 Query 29751 AGTTTTGCCAGT-TAAGGTTTTAACAAATATCTGCAT 29786 || |||| ||| || || || ||||| | |||||| Sbjct 6885744 GGTCTTGCAAGTCAAAAGTCTTCACAAAAACCTGCAT 6885708 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| || || || | ||| || Sbjct 184224 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCC 184165 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || || |||||||| || Sbjct 184164 ATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 184105 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | |||||||| || || || | || || Sbjct 184104 GTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAAGGTGAT 184045 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || || || |||||||| Sbjct 184044 GGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 184009 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||| || ||||| || | || ||||| ||||||||||| || || || Sbjct 13774911 TCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGC 13774852 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||||| || ||| | || | || |||||||| || || Sbjct 13774851 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 13774792 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | ||| ||| ||| | || | || ||||| ||| || Sbjct 13774791 AATACCCTCCTTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCAC 13774732 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || || || ||||| | ||| || ||||| || |||||| Sbjct 13774731 CTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 13774683 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || || || || || || | |||||| Sbjct 183996 ACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCC 183937 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || ||||| || || || Sbjct 183936 ATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 183877 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | |||||||| || || ||||| || | Sbjct 183876 GTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGA 183818 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || || || ||||| |||||||| Sbjct 183817 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 183781 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||||||||| | || ||| | || || || || |||||||| || |||||||| || Sbjct 9477437 TCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTGC 9477496 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| ||| ||| || | || || |||||| | |||| ||| |||||||| || || Sbjct 9477497 AAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAGG 9477556 Query 29679 AATACCCTCTTTGTCTTGTAA 29699 || || || ||||| || || Sbjct 9477557 GATGCCTTCCTTGTCCTGAAA 9477577 >seq2 Length=33308843 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || || || ||||||||||| |||||||| | || | ||| || || || Sbjct 6938401 TGAAGGGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGC 6938460 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| |||| | || ||||| || || ||||| || || ||||| || ||| || Sbjct 6938461 TTACCAGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTG-AATCTT 6938519 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||| | || | || |||||| ||||| || | ||||| || || ||||| Sbjct 6938520 TGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGT 6938579 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| |||||||| Sbjct 6938580 AAGTGTCTTCACAAAGATCTGCAT 6938603 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || ||||| |||||||| ||||| || | || | Sbjct 6938616 ACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCC 6938675 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 6938676 GTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 6938735 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| ||||| | || | ||||| || ||| ||||| | ||| | Sbjct 6938736 GTCCTG-AATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 6938794 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || || || ||||| || |||||| Sbjct 6938795 TGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 6938832 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||| || ||||| || | || ||||| ||||||||||| || || || Sbjct 6938832 TCCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCTGC 6938891 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||||| || ||| | || | || |||||||| || || Sbjct 6938892 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 6938951 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| ||||| || | |||| |||||| | || | || || || ||| || Sbjct 6938952 GATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 6939011 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || || || ||||| | || || ||||| ||||||||| Sbjct 6939012 CTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATT 6939060 >seq6 Length=38222195 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| || |||||||| ||||| || || || || || || || ||||| || Sbjct 34537724 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 34537783 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || || | || || || ||| | |||||||| ||||||||||| ||| Sbjct 34537784 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCCGGGGGA 34537843 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || || || | || ||||| | || | ||||| || || || Sbjct 34537844 ATTCCCTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCAACC 34537903 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | ||| || || || |||||||| Sbjct 34537904 TCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 34537950 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || ||||| || || || || || ||||| || | || || Sbjct 34520061 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 34520120 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || || | ||||| || ||||| ||||| ||||| ||||| || Sbjct 34520121 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 34520180 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | || ||||| || || || ||||| || Sbjct 34520181 GTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACCTCGAGAGTGAT 34520240 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||| |||||| || || |||||||| Sbjct 34520241 CGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || ||||| ||||| || | ||| | | Sbjct 34537963 ACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACC 34538022 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCT-CTT 29689 || ||||| || || || || | ||||| || |||||||| || || || || | | | Sbjct 34538023 GTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCCT 34538082 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||| || | || ||||| | || | ||||| || || || || ||||| | Sbjct 34538083 TGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGA 34538142 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || |||| |||||| || || |||||||| Sbjct 34538143 TCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||||||| || || || || || || || || |||||||||| || | ||| Sbjct 34519837 AGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 34519896 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || ||||| | ||||| || ||||||||||| || || || || || || Sbjct 34519897 TCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 34519956 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||| || || ||||| ||||| || || Sbjct 34519957 TGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGATTGTC 34520016 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || || || || || ||||| Sbjct 34520017 TTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 34520048 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||||| || || || || || |||||||||| || | ||| Sbjct 34537511 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 34537570 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || ||||| | ||||| || ||||||||||| || || || || || || Sbjct 34537571 TCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 34537630 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | || || || || || || || || || || Sbjct 34537631 TGGATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTC 34537690 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| |||||||| Sbjct 34537691 TTCCCTGTCAAAGTCTTCACAAAAATCTGCAT 34537722 >seq5 Length=29328693 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 29593 GATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCA 29652 || || || || || |||||||| || | || ||| ||| || | || || || || Sbjct 19804625 GACTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCGGCG 19804566 Query 29653 TATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACA 29712 | ||||| ||||||||||||||||| |||||||| || ||||| | || ||||||| Sbjct 19804565 AAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCTTGAACCTTGGCTTTGACA 19804506 Query 29713 GTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTA 29772 | || | || || || || || || || || || || |||||||| || || || Sbjct 19804505 TTGTCAATGGTATCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCTTC 19804446 Query 29773 ACAAATATCTGCAT 29786 ||||| |||||||| Sbjct 19804445 ACAAAAATCTGCAT 19804432 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || || || || || || ||||||||||| || | ||||| Sbjct 21080831 ACGAAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCC 21080890 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || |||||||| | || | || ||||| || || || || ||||| || Sbjct 21080891 ATCCTCCAACTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 21080950 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || || || || || || Sbjct 21080951 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGAT 21081010 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| |||| |||||| || ||||||||||| Sbjct 21081011 GGTCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 21081046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385204890069768