Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq3048 551 7e-152 seq2811 491 5e-134 seq2823 358 8e-94 seq838 334 9e-87 seq929 318 7e-82 seq990 197 2e-45 seq1012 127 2e-24 seq5 125 9e-24 seq2 95.1 1e-14 >seq3048 Length=155691 Score = 551 bits (610), Expect = 7e-152 Identities = 714/976 (73%), Gaps = 9/976 (1%) Strand=Plus/Minus Query 177579 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177638 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 1396 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1337 Query 177639 GCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCAT 177697 |||||| |||| || || | || ||| | ||||| || || || || || || || || Sbjct 1336 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 1278 Query 177698 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 177757 |||||||| || |||| || | | || || ||||| || || || ||||| || | Sbjct 1277 TCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTAT 1218 Query 177758 ACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 177817 || |||| || || ||| | ||||| || || || |||||||| || || |||| Sbjct 1217 CCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGA 1158 Query 177818 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCAT 177877 ||| ||| | || |||||||| |||| | || | || | |||||| | | || | Sbjct 1157 TGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 1098 Query 177878 --CTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGG 177935 || ||| |||||||| ||||||||||||||| | |||||| ||||||||||| ||| Sbjct 1097 AGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGG 1040 Query 177936 ATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCC 177994 || ||||||||| || || ||||||||||| || | || || ||||| | |||| || Sbjct 1039 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCC 981 Query 177995 TTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTA 178054 | |||||||| || || || | ||||||||| || |||||||||||||| |||| Sbjct 980 AATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 921 Query 178055 CATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGT 178114 |||| ||||||||||||| || ||||| |||||||||||||| || |||||||| ||||| Sbjct 920 CATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGT 861 Query 178115 TGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTC 178174 ||||| ||||| || || || || ||| |||||||||||| | | || || ||| Sbjct 860 GGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 801 Query 178175 GCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGA 178234 | || | || || ||||||| ||| || || | ||||||| ||||| ||||| Sbjct 800 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 741 Query 178235 AGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATA 178294 |||||||| ||||| ||||| || || |||||||| || || || |||||||||||||| Sbjct 740 GGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 681 Query 178295 TGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGG 178354 ||| |||||||| || ||||| | ||||||||| | || || ||||||||||| || Sbjct 680 TGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGG 621 Query 178355 AATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTT 178414 |||||||||||||| | ||| | ||| ||||| || ||| | ||||| || || || Sbjct 620 TATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTT 561 Query 178415 CAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAA 178474 ||| || || | | || | ||||| ||||| | || || ||||| || | |||| Sbjct 560 CAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAA 501 Query 178475 CCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTG 178534 ||| || ||| || |||||||| ||||| ||| | ||| || ||||| ||||| || | Sbjct 500 CCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAATTTCCCTCTAG 442 Query 178535 ATCTTGCAGCAGCTGA 178550 | || || || | ||| Sbjct 441 ACCTAGCTGCTGTTGA 426 Score = 533 bits (590), Expect = 2e-146 Identities = 722/1004 (72%), Gaps = 2/1004 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 33681 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 33740 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 33741 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 33800 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128 |||| |||||||| | || ||||||||| | |||||| |||||| | || || || | Sbjct 33801 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAG 33860 Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188 | || || |||||| | | | | || ||| | | |||| ||||||||||| | | Sbjct 33861 TTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 33920 Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248 | || |||| || ||||| ||| | || || || |||| || || ||||| |||| Sbjct 33921 AAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTCGCTCTGCACG 33980 Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307 | || |||| ||||| || |||||| | ||||| |||||||| || || ||| || | Sbjct 33981 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 34040 Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367 | || ||||| ||||| ||||| || | ||||| ||||| || || ||| |||||| Sbjct 34041 -TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34099 Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427 || || || || || || || || |||||||||||||||| |||||||| || || Sbjct 34100 CTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCAGCT 34159 Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487 || ||| ||||| | || || || ||||| || || || |||||| | ||||| ||||| Sbjct 34160 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 34219 Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547 |||||||||||||| || | |||| | ||||||| | | ||||||||||| | || Sbjct 34220 ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACC 34279 Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607 ||||| ||||| || | ||||||||| || ||||| ||||| || || || | Sbjct 34280 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 34339 Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 34340 ACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 34399 Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727 |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || | Sbjct 34400 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 34459 Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787 ||| | ||| | | || |||| | | || || || || || || ||||| ||||| Sbjct 34460 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 34519 Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847 || || ||| || ||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 34520 TTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 34579 Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907 || ||||| | || ||||| | ||||||||| |||| || ||||| || |||||| Sbjct 34580 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 34639 Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 34640 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34683 >seq2811 Length=1036 Score = 491 bits (544), Expect = 5e-134 Identities = 690/963 (72%), Gaps = 4/963 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 75 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 134 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 135 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 194 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128 |||| |||||||| | || ||||||||| | |||||| |||||| | || || || | Sbjct 195 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAG 254 Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188 | || || |||||| | | | | || ||| | | |||| ||||||||||| | | Sbjct 255 TTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 314 Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248 | || |||| || ||||| ||| | || || || |||| || | | |||| |||| Sbjct 315 AAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG-CTCTGCACG 373 Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307 | || |||| ||||| || |||||| | ||||| |||||||| || || ||| || | Sbjct 374 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 433 Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367 | || ||||| ||||| ||||| || | ||||| ||||| || || ||| |||||| Sbjct 434 -TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTC 492 Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCG-GC 179426 || || || || || || || || |||||||||||||||| |||||||| || || Sbjct 493 CTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCTAGC 552 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 || ||| ||||| | || || || ||||| || || || |||||| | ||||| ||||| Sbjct 553 TATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 612 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| || | |||| | ||||||| | | ||||||||||| | || Sbjct 613 TATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTAC 672 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 ||||| ||||| || | ||||||||| || ||||| ||||| || || || | Sbjct 673 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCC 732 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 733 AACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 792 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || | Sbjct 793 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 852 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | || |||| | | || || || || || || ||||| ||||| Sbjct 853 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGA 912 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 || || ||| || ||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 913 CTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 972 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || ||||| | || ||||| | ||||||||| |||| || ||||| || ||||| Sbjct 973 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1032 Query 179907 AAA 179909 ||| Sbjct 1033 AAA 1035 >seq2823 Length=1025 Score = 358 bits (396), Expect = 8e-94 Identities = 414/554 (75%), Gaps = 3/554 (1%) Strand=Plus/Plus Query 177999 GGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 178058 |||||||| || || || | ||||||||| || |||||||||||||| |||| |||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 178059 CTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCC-ACATGCTCGGTGTTGC 178117 ||||||||||||| || ||||| |||||||||||||| || | ||||||| ||||| || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 178118 TGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCT 178177 ||| ||||| || || || || ||| |||||||||||| | | || || ||| | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 190 Query 178178 CGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGA 178237 || | || || ||||||| ||| || || | ||||||| ||||| ||||| || Sbjct 191 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 250 Query 178238 AGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 178297 |||||| ||||| ||||| || || |||||||| || || || ||||||||||||||||| Sbjct 251 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 310 Query 178298 ATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAAT 178357 |||||||| || ||||| | ||||||||| | || || ||||||||||| || || Sbjct 311 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 370 Query 178358 CTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAA 178417 |||||||||||| | ||| | ||| ||||| || ||| | ||||| || || ||||| Sbjct 371 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 430 Query 178418 CCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCG 178477 || || | | || | ||||| ||||| | || || ||||| || | ||||||| Sbjct 431 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 490 Query 178478 TG-CCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGAT 178536 | | ||| || |||||||| ||||| ||| | ||| || ||||| ||||| || || Sbjct 491 CGACTAATCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAATTTCCCTCTAGAC 549 Query 178537 CTTGCAGCAGCTGA 178550 || || || | ||| Sbjct 550 CTAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 334 bits (370), Expect = 9e-87 Identities = 430/583 (74%), Gaps = 9/583 (2%) Strand=Plus/Minus Query 177579 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177638 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 597 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 538 Query 177639 GCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCAT 177697 |||||| |||| || || | || ||| | ||||| || || || || || || || || Sbjct 537 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 479 Query 177698 CCGTG-AACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTG 177756 |||| |||| || |||| || | | || || ||||| || || || ||||| || Sbjct 478 TCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 419 Query 177757 TACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTG 177816 | || |||| || || ||| | ||||| || || || |||||||| || || ||| Sbjct 418 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 359 Query 177817 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCA 177876 |||| ||| | || |||||||| |||| | || | || | |||||| | | || Sbjct 358 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 299 Query 177877 T--CTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTG 177934 | || ||| |||||||| ||||||||||||||| | |||||| ||||||||||| || Sbjct 298 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTG 241 Query 177935 GATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATC 177993 ||| ||||||||| || || ||||||||||| || | || || ||||| | |||| | Sbjct 240 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACC 182 Query 177994 CTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACT 178053 | | |||||||| || || || | ||||||||| || |||||||||||||| |||| Sbjct 181 CAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACT 122 Query 178054 ACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTG 178113 |||| ||||||||||||| || ||||| |||||||||||||| || |||||||| |||| Sbjct 121 TCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTG 62 Query 178114 TTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 | ||||| ||||| || || || || ||| |||||||||||| Sbjct 61 TGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGG 19 >seq929 Length=1222 Score = 318 bits (352), Expect = 7e-82 Identities = 417/569 (73%), Gaps = 9/569 (2%) Strand=Plus/Plus Query 177579 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177638 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 658 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 717 Query 177639 GCAACTATCTGC--TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCA 177696 |||||| |||| || | | || ||| | ||||| || || || || || || || | Sbjct 718 GCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTA 776 Query 177697 TCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTG 177756 | |||||||| || |||| || | | || || ||||| || || || ||||| || Sbjct 777 TTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 836 Query 177757 TACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTG 177816 | || |||| || || ||| | ||||| || || || |||||||| || || ||| Sbjct 837 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 896 Query 177817 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCA 177876 |||| ||| | || |||||||| |||| | || | || | |||||| | | || Sbjct 897 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 956 Query 177877 T--CTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTG 177934 | || ||| |||||||| ||||||||||||||| | |||||| ||||||||||| || Sbjct 957 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTG 1014 Query 177935 GATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATC 177993 ||| ||||||||| || || ||||||||||| || | || || ||||| | |||| | Sbjct 1015 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACC 1073 Query 177994 CTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACT 178053 | | |||||||| || || || | ||||||||| || |||||||||||||| |||| Sbjct 1074 CAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACT 1133 Query 178054 ACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTG 178113 |||| ||||||||||||| || ||||| |||||||||||||| || |||||||| |||| Sbjct 1134 TCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTG 1193 Query 178114 TTGCTGGGGTATTCGGTGGATCTCTTTTC 178142 | ||||| ||||| || || || || ||| Sbjct 1194 TGGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 197 bits (218), Expect = 2e-45 Identities = 253/346 (73%), Gaps = 2/346 (1%) Strand=Plus/Minus Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCG-TTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || ||||| ||||||||| || ||||| Sbjct 958 ACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTGGTCCCAAATCTT 899 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTT-GGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCA 179725 |||||| | ||| |||||| |||| |||| || ||||||| | | ||||| || || | Sbjct 898 TGGGGTTGCTTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 839 Query 179726 TGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATG 179785 ||| | ||| | | || |||| | | || || || || || || ||||| |||| Sbjct 838 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATG 779 Query 179786 ATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAA 179845 | || || ||| || ||| | ||||| ||||||||||| || ||||| ||||| || | Sbjct 778 ACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCA 719 Query 179846 AGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATG 179905 | || ||||| | || ||||| | ||||||||| |||| || ||||| || |||| Sbjct 718 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 659 Query 179906 AAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||||| | || ||||| || || || ||||| |||| ||||| || Sbjct 658 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 613 >seq1012 Length=1043 Score = 127 bits (140), Expect = 2e-24 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 179704 TTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTA 179763 |||| | | ||||| || || | ||| | ||| | | || |||| | | || || Sbjct 1043 TTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTG 984 Query 179764 GCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCT 179823 || || || || ||||| ||||| || || ||| || ||| | ||||| ||||||||| Sbjct 983 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCT 924 Query 179824 GAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTG 179883 || || ||||| ||||| || || || ||||| | || ||||| | ||||||||| || Sbjct 923 GAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATG 864 Query 179884 GCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGT 179943 || || ||||| || ||||||||| | || ||||| || || || ||||| |||| Sbjct 863 GCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGA 804 Query 179944 AACGCACT 179951 ||||| || Sbjct 803 AACGCTCT 796 >seq5 Length=29328693 Score = 125 bits (138), Expect = 9e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138527 CTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCT 138586 |||||||| ||||| || || || || || || |||||| | || || || ||||||| Sbjct 16018212 CTGATGATGTCTACATTCTCGACGCCGCCGAGGAGGCAGGTCTCGACCTCCCTTACTCCT 16018153 Query 138587 GTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGT 138646 |||| || ||| | || ||| |||| || || || | ||||| || || || || |||| Sbjct 16018152 GTCGCGCCGGTTCCTGCTCTTCCTGCGCCGGCAAGGTTGTTGATGGCACCGTCGACCAGT 16018093 Query 138647 CTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAG 138706 |||||||| || |||||||||||||| |||| | || ||| || | ||||| || | Sbjct 16018092 CTGACCAGAGCTTTCTTGATGATGACCAGATTGATGGTGGCTTTGTCCTCACTTGTGTCG 16018033 Query 138707 CATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755 | || || | || ||| || ||||||| | || ||||| || || Sbjct 16018032 CCTATCCTTCCTCTGATGTTACTCTTGAAACCCACAAGGAGGAGGAGCT 16017984 >seq2 Length=33308843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTT 138576 |||||| | | ||||| |||||| | ||| | ||||| | ||||| |||| || Sbjct 26874698 TTTGACGCTCCAGATGACTCTTACATCTTGGATTCAGCTGAGAATGCAGGAGTTGAGCTG 26874639 Query 138577 CCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACT 138636 ||||| || || | ||||| ||||| || |||||||| || || | || | ||| || Sbjct 26874638 CCCTATTCTTGCAGGGCTGGGGCATGCTCCACCTGTGCAGGAAAGATGGTAGCAGGTTCT 26874579 Query 138637 GTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATT-TATCAT 138695 || || |||||||| || ||||||||||| |||||| || || ||| || | | | Sbjct 26874578 GTTGACCAGTCTGATGGTTCCTTCCTTGATGACAACCAAA-TGAAGGAGGGTTATTTGCT 26874520 Query 138696 GACTTGCGTAGCATACCCCACATCCGATTGT 138726 ||| || || ||||||| | || || ||| Sbjct 26874519 GACCTGTGTCTCATACCCATCTTCAGACTGT 26874489 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 138507 AGAACAAATCTTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGG 138566 ||||| ||| |||| | | |||||| |||||| | ||| | ||||| | ||||| Sbjct 743640 AGAACGAAT--TTGATGCTCCAGATGATGCTTACATCTTGGATTCAGCTGAGAATGCAGG 743583 Query 138567 TATTGATCTTCCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGT 138626 ||||| || ||||| || || | ||||| ||||| || |||||||| || || | || Sbjct 743582 AATTGAGCTGCCCTATTCTTGCAGGGCTGGGGCATGCTCCACCTGTGCAGGAAAGATGGT 743523 Query 138627 TGAAGGAACTGTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAA 138676 | ||| || || || |||||||| || ||||||||||| |||||| Sbjct 743522 AGCAGGTACAGTGGACCAGTCTGATGGTTCCTTCCTTGATGACAACCAAA 743473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605644124079680