Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 161 1e-34 seq4 152 5e-32 seq5 125 7e-24 seq1 120 3e-22 seq3 118 1e-21 seq2 114 1e-20 >seq6 Length=38222195 Score = 161 bits (178), Expect = 1e-34 Identities = 157/200 (79%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| ||| || || || |||||||||||||| | Sbjct 34538211 GTTGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTCCGGCCG--TCCTCGAGCTGCTTTC 34538268 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||||| ||||||||||||||||||||| |||||||| |||||| || Sbjct 34538269 CGGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCT 34538328 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | ||| || |||| ||||| ||| ||||||||||| | Sbjct 34538329 TGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 34538388 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| ||||| ||||||||| Sbjct 34538389 TTTTCACGAAGATCTGCATG 34538408 Score = 143 bits (158), Expect = 3e-29 Identities = 153/200 (77%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| | | || ||| |||||| |||||||| | Sbjct 34520308 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGT--ACGGCCGTCCTCAAGCTGCTTTC 34520365 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||||| ||||||||| ||||||||||| |||||||| |||||| || Sbjct 34520366 CGGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCT 34520425 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || || ||||||| | ||| || |||| ||||| ||| |||||||| || | Sbjct 34520426 TGACGTTGTCGACGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGG 34520485 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| || ||||| |||||| Sbjct 34520486 TTTTCACAAAAATTTGCATG 34520505 Score = 140 bits (154), Expect = 3e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||||| || ||||| ||| ||| ||| ||||||||||||||| || ||| | | Sbjct 22063131 CTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGA 22063072 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 |||| |||||||| || |||||||||||||||||||| |||||| ||||| | | Sbjct 22063071 TGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGT 22063012 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||| || |||||| |||| |||| ||| || || || || ||||| |||| Sbjct 22063011 CGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 22062952 Query 133651 AAATCTGCAT 133660 | |||||||| Sbjct 22062951 ATATCTGCAT 22062942 Score = 118 bits (130), Expect = 1e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||||||||| ||||| || |||||||| ||| || |||| |||||||| Sbjct 34519615 AAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGT--ACGACCGTCCTCGA 34519672 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| || | || | || |||||||| || ||||| |||||||| || || Sbjct 34519673 GCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGGA 34519732 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| |||| | |||| || || | | ||| || || | |||| ||| |||| Sbjct 34519733 TCTTGGCTTTGACATTATCAATGGTATCCGAGCTCTCAACCTCCAAAGTGATGGTCTTGC 34519792 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||| || || ||||||||||| Sbjct 34519793 CTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCG-TGGACGAGTCCTCGAG 133513 ||||| | ||||||||| ||||| |||||||||||| ||| | | | | | ||||| | Sbjct 34520071 AAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCCA-TCCTCCAA 34520129 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | || ||||||||| || || || || |||||||| ||| Sbjct 34520130 CTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGAT 34520189 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| || || | | ||| || |||| |||| || || || Sbjct 34520190 CTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACCTCGAGAGTGATCGTCTTCCC 34520249 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| ||||| |||||||| Sbjct 34520250 GGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 118 bits (130), Expect = 1e-21 Identities = 151/207 (73%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| ||||| || |||||||| ||| || |||||||||| Sbjct 34537973 AAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACCGTCCTCGAGC 34538032 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTT-CCTTGTCGGTGAT 133573 ||||| || ||| | || | || |||||| || || ||||| |||| ||||||| ||| Sbjct 34538033 TGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCCTTGTCCTGGAT 34538092 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||||| | ||| || |||| |||| || || || Sbjct 34538093 CTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATCGTCTTTCC 34538152 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| ||||| |||||||| Sbjct 34538153 GGTTAGGGTTTTCACGAAGATCTGCAT 34538179 Score = 107 bits (118), Expect = 2e-18 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCG 133511 ||||| | || ||||| ||||| ||||||||||| | | || || | | ||||| Sbjct 34519843 AAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG--CCA-TCCTCC 34519899 Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 | ||||| || ||| |||| | || |||||| || || ||||| |||||||| || | Sbjct 34519900 AATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTGG 34519959 Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||||| ||||| | |||| |||||||| | ||| || |||| |||| || || Sbjct 34519960 ATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGATTGTCTTC 34520019 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||| || ||||| || ||||| Sbjct 34520020 CCGGTGAGAGTCTTCACGAAGATTTGCAT 34520048 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| ||||||||||| ||| || ||| | |||||||| Sbjct 34537289 AAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCA-TCCTCGAG 34537347 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | || ||||||||| || ||||| |||||||| || ||| Sbjct 34537348 CTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGGAT 34537407 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | || | || || | |||||| || | |||| ||| || || Sbjct 34537408 CTTGGCTTTGACATTATCGATGGTATCTGAACTCTCCACCTCCAAAGTGATGGTCTTTCC 34537467 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || || |||||||| Sbjct 34537468 TGTCAAAGTCTTCACAAAGATCTGCAT 34537494 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| |||||||||||| ||| || |||||| | | Sbjct 34537745 AAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTCCAAC 34537804 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | | |||||| || || || || || ||||| || |||| Sbjct 34537805 TGCTTACCGGCAAAGATCAATCTCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATC 34537864 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| |||||||| | ||| || |||| |||| ||| || ||| Sbjct 34537865 TTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTCCCG 34537924 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 34537925 GTAAGGGTCTTCACGAAGATCTGCAT 34537950 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCG 133511 || || | ||||||||| ||||| ||||||||||| | | || || | | ||||| Sbjct 34537517 AAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG--CCA-TCCTCC 34537573 Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 | ||||| || ||| | || | || |||||| || || ||||| |||||||| || | Sbjct 34537574 AATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTGG 34537633 Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||||| ||||| | |||| || |||| | ||| || || | ||| | ||| || Sbjct 34537634 ATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTCTTC 34537693 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||| ||| || || ||||||||||| Sbjct 34537694 CCTGTCAAAGTCTTCACAAAAATCTGCAT 34537722 >seq4 Length=23292877 Score = 152 bits (168), Expect = 5e-32 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| | | ||| |||||||||||||||||| Sbjct 18773390 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 18773331 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| || |||||||| |||||||| |||||| |||| Sbjct 18773330 GCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 18773271 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| || |||||| |||| ||||| ||| || || || || ||| Sbjct 18773270 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTT 18773211 Query 133644 TTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 18773210 TTCACGAAGATCTGCATGG 18773192 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| || | || || | ||| || || |||||||||||||| ||| Sbjct 15563342 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGGATGCCTTCTTTG 15563401 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| |||| | || | || || | ||| || || | |||| | Sbjct 15563402 TCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCTCGACCTCAATAGTGATG 15563461 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || |||||||||||||| |||||||| ||||| Sbjct 15563462 GTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCAT 15563496 >seq5 Length=29328693 Score = 125 bits (138), Expect = 7e-24 Identities = 149/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||| || | | || || || |||||||||||||| | Sbjct 19804400 GTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCG--TCCTCGAGCTGCTTTC 19804343 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||| || || ||||||||||| |||||||| |||||| | Sbjct 19804342 CGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTT 19804283 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||||||| |||||||| || | Sbjct 19804282 TGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGACGGTCTTGCCGGTAAGCG 19804223 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || |||||| || Sbjct 19804222 TCTTCACAAAGATCTGCCTG 19804203 Score = 107 bits (118), Expect = 2e-18 Identities = 145/197 (74%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 133467 GACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGC 133525 ||||| ||||| ||||| |||||| ||| || ||| | ||||| | |||||| || || Sbjct 19804625 GACTCCTTCTGGATATTATAATCGGCCAAAGTACGACCA-TCCTCCAACTGCTTTCCGGC 19804567 Query 133526 GTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT-GA 133584 | | || | || ||||| || || ||||| || ||||| || ||| | || |||| || Sbjct 19804566 GAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCT-TGAACCTTGGCTTTGA 19804508 Query 133585 GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTT 133644 | |||| || |||| | |||||| || | ||||| ||| ||||| |||| ||| | Sbjct 19804507 CATTGTCAATGGTATCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCT 19804448 Query 133645 TTACGAAAATCTGCATG 133661 | || |||||||||||| Sbjct 19804447 TCACAAAAATCTGCATG 19804431 >seq1 Length=22681039 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| | | || || || ||||||||||| || | Sbjct 22555163 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCG--TCCTCGAGCTGTTTTC 22555220 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || |||||||| |||||||| |||||| || Sbjct 22555221 CGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 22555280 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| || |||||| || | |||| || || || || || | Sbjct 22555281 TCACATTATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGG 22555340 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 22555341 TTTTCACGAAGATCTGCAT 22555359 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || | | || || || |||||||||| || | Sbjct 22583181 GTCGACTCCTTCTGGATGTTGTAGACGGCGAGAGTCCGGCCG--TCCTCGAGCTATTTTC 22583238 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || || |||||||| | |||||||| |||||||| |||||| || Sbjct 22583239 CGACGAAGATAAGGCGTTGCTGGTCCAGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 22583298 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| || |||||| || | |||| || || || || || | Sbjct 22583299 TCACATTGTCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGG 22583358 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 22583359 TTTTCACGAAGATCTGCAT 22583377 >seq3 Length=27879571 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || |||||||| | | || | | | ||||| || Sbjct 183758 AAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCCA-TCCTCAAG 183700 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | || || ||||||||||| || ||||| || |||||||| || Sbjct 183699 CTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAAT 183640 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||| | | |||||| || | ||||| || ||||| Sbjct 183639 CTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCC 183580 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| |||||||| ||||| Sbjct 183579 GGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 116 bits (128), Expect = 4e-21 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||||||||| || || ||||| || | | || || || ||||||||||||||| Sbjct 13774425 GGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCG--TCCTCGAGCTGCTTG 13774368 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || |||| |||||||| || ||||| || |||||||| ||||||| | Sbjct 13774367 CCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTTGCC 13774308 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | | || || |||| ||||| || ||||| || || Sbjct 13774307 TTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCTTGCCTGTGAGG 13774248 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 13774247 GTTTTCACAAAGATCTGCAT 13774228 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| |||||||| || | | ||| | | | ||||| || Sbjct 183986 AAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCA-TCCTCAAG 183928 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || |||| ||||||||| || || |||||||||||||| || Sbjct 183927 CTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAAT 183868 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | ||| || || | ||||| ||| || || Sbjct 183867 CTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTTCC 183808 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || || |||||||| Sbjct 183807 AGTCAAAGTCTTGACAAAGATCTGCAT 183781 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||||||| || ||||||||||| | | ||| | | | ||||| ||||| |||| Sbjct 13774653 GGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCCA-TCCTCTAGCTGTTTGC 13774595 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| |||||| || || |||||||| |||||||| |||||| || Sbjct 13774594 CGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGAATCTTTGCCT 13774535 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | ||| || || | |||| ||| || || || |||| Sbjct 13774534 TGACATTATCGATTGTGTCAGAGCTCTCAACCTCCAATGTGATGGTCTTCCCTGTGAGAG 13774475 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 13774474 TCTTGACAAAGATCTGCATG 13774455 Score = 107 bits (118), Expect = 2e-18 Identities = 130/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||| || | | || || || |||||||||||||| | Sbjct 6885676 GTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGGCCG--TCCTCGAGCTGCTTTC 6885619 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||| ||||| ||||||||||| |||||||| |||||| | Sbjct 6885618 CGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTT 6885559 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | ||||||| | ||| || |||| ||||| ||| |||||||| Sbjct 6885558 TGACGTTGTCGATGGTGTCGGAGCTCTCTACCTCGAGGGTGATGGTCTTGCCGGT 6885504 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||| || | | || | |||||| ||||||||||| Sbjct 184434 GGTAGACTCCTTCTGGATATTGTAGTCTGCAAGAGTACGCCCGTCCTCAAGCTGCTTGCC 184375 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || || || || |||||||| ||||| ||| Sbjct 184374 GGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTGGCCTT 184315 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | |||||| || | ||||| ||| || || || || || Sbjct 184314 CACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTAAGGGT 184255 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 184254 CTTGACAAAAATCTGCAT 184237 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || |||||||| || | | ||| | | | ||||| |||||||| || Sbjct 13842016 GTCGATTCCTTTTGAATATTGTAGTCAACAAGGGTGTGTCCA-TCCTCAAGCTGCTTACC 13842074 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || |||| |||| || ||||| || |||||||||||||||||| ||| ||| || | Sbjct 13842075 AGCAAAAATCAGCCTTTGTTGGTCCGGGGGGATGCCTTCCTTGTCGTGGAT-TTTGGCTT 13842133 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | || || || | ||||| ||| ||||| || |||| Sbjct 13842134 TGACATTATCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAG 13842193 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 13842194 TCTTGACGAAGATCTGCAT 13842212 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || |||||||| | | || | ||||| |||||||| || Sbjct 13657333 GGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCC 13657274 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||||| ||||||||| || |||||||| ||||| || ||||| || Sbjct 13657273 AGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTTGGCTTT 13657214 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||| || | ||| || || | || | ||| || || |||||||| Sbjct 13657213 CACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGT 13657154 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || |||||||| Sbjct 13657153 TTTGACAAAGATCTGCAT 13657136 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||||||||||| ||||| |||||| ||| || ||| | ||||| | |||||| || Sbjct 6885904 TGGACTCTTTCTGGATATTATAATCGGCCAAAGTACGACCA-TCCTCCAACTGCTTTCCG 6885846 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | || ||||| || || ||||| || ||||| || ||||| | ||| Sbjct 6885845 GCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCTTGAATCTTGGGTTTG 6885786 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTC-AGAGT 133642 | | |||| || || | | ||| || |||| ||||| ||| |||| ||| | ||| Sbjct 6885785 ACATTGTCAATGGTATCAGAGCTCTCTACCTCGAGGGTGATGGTCTTGCAAGTCAAAAGT 6885726 Query 133643 TTTTACGAAAATCTGCATG 133661 || || |||| ||||||| Sbjct 6885725 CTTCACAAAAACCTGCATG 6885707 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 |||| || || || || || |||||||| || | | ||| | | | ||||||||||| Sbjct 13656426 TGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCA-TCCTCGAGCTG 13656368 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || |||| || | |||||||| || || ||||||||||| || ||| || Sbjct 13656367 CTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGAT-TT 13656309 Query 133577 TTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | || |||| | || | ||||| | | || || || | ||||| ||| ||||| | Sbjct 13656308 TGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTGCCAG 13656249 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || ||||| |||||||| Sbjct 13656248 TGAGAGTCTTAACGAAGATCTGCAT 13656224 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| || || ||||||||||| | | || | | | || || |||||||| | Sbjct 13775337 GGTTGACTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCA-TCTTCAAGCTGCTTAC 13775279 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| ||||| ||||| |||||||| |||||| | Sbjct 13775278 CAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTT 13775219 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || || | ||| || || | ||| | ||| || || || || | Sbjct 13775218 TCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGG 13775159 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 13775158 TCTTCACAAAGATCTGCAT 13775140 >seq2 Length=33308843 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| || |||||||| ||| || |||||| ||| Sbjct 6938626 AAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCCGTCCTCAAGC 6938685 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| ||||||||| || || |||||||| ||||| ||| Sbjct 6938686 TGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATC 6938745 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | |||| ||||| | | ||||| || | || | |||||| ||| Sbjct 6938746 TTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATGGTTTTCCCG 6938805 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || ||||| ||||| Sbjct 6938806 GTCAAAGTCTTCACAAAAATTTGCAT 6938831 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||||||| | | ||| | | | ||||| ||||| ||||| Sbjct 6939091 GTAGACTCCTTTTGGATATTGTAATCGGCAAGGGTGCGGCCA-TCCTCTAGCTGTTTGCC 6939149 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| |||||| || || || ||||| |||||||| ||||||| ||| Sbjct 6939150 GGCAAAGATGAGCCTCTGCTGATCTGGGGGTATGCCCTCCTTGTCCTGGATCTTTGCCTT 6939209 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | ||| || || | |||| ||| || || || ||||| Sbjct 6939210 GACATTATCGATTGTATCAGAACTCTCAACCTC-AATGTGATGGTCTTCCCTGTGAGAGT 6939268 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 6939269 CTTAACAAAGATCTGCATG 6939287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||||||||| || || ||||| || | | || | |||||| ||||||||||| Sbjct 6939318 GTGGACTCTTTTTGGATGTTGTATTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 6939377 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| || |||| || || || || |||||||| ||||||| ||| Sbjct 6939378 GCAAAGATCAGCCTTTGTCGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 6939437 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | || || || | ||||| ||| ||||| || || ||| Sbjct 6939438 ACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTT 6939497 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 6939498 TTCACAAAGATCTGCAT 6939514 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| || || || |||||||| ||| || | || || |||||||| || Sbjct 6938406 GGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACC 6938465 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| ||||| |||||||||||||| |||||| || Sbjct 6938466 AGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTT 6938525 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || || | ||| || || | ||| | ||| || || || || || Sbjct 6938526 CACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGT 6938585 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 6938586 CTTCACAAAGATCTGCAT 6938603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483402381667520