Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq6 123 2e-23 seq3 122 8e-23 seq2 122 8e-23 seq4 120 3e-22 seq5 100 3e-16 >seq1 Length=22681039 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || |||| || ||||| || || || || Sbjct 22555168 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 22555227 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||||| | | Sbjct 22555228 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 22555287 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||||| ||||||||| || ||||| | |||||||| Sbjct 22555288 ATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22555347 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22555348 GAAGATCTGCAT 22555359 >seq6 Length=38222195 Score = 123 bits (136), Expect = 2e-23 Identities = 158/214 (74%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || |||||| || || |||||||||||||| ||||| | || || Sbjct 34520067 CACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCCATCCTC 34520126 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||||||| || || ||||||| ||||||||||| |||| | |||||||||| Sbjct 34520127 CAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 34520186 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||| | |||| | | || || |||| || ||||| | ||||||| Sbjct 34520187 GATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TCGACCTCGAGAGTGATCG 34520242 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || | ||||| || || |||||||| Sbjct 34520243 TCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 34520276 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| |||| ||| || |||| || |||||||| || ||||| Sbjct 34519629 CTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAA 34519688 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| |||||||||| || | | ||||| ||| |||||| || | | | Sbjct 34519689 GATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGGATCTTGGCTTTGACATT 34519748 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || |||| || ||||||| ||||| || || || |||||||| || Sbjct 34519749 ATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTT 34519805 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 34519806 CACAAAAATCTGCAT 34519820 Score = 116 bits (128), Expect = 3e-21 Identities = 141/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||||||||| || |||| || |||||||| || || || Sbjct 22063132 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 22063073 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||| || | ||| | || |||||||| |||||| ||| | | | Sbjct 22063072 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22063013 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| |||||||| | ||||| || || ||||| | |||||||| Sbjct 22063012 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 22062953 Query 35726 AATATCTGCAT 35736 ||||||||||| Sbjct 22062952 AATATCTGCAT 22062942 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 34520313 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAA 34520372 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || |||||||||| |||||| ||| | || Sbjct 34520373 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GT 34520431 Query 35665 TGCC-ACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | || |||||| ||| || ||||| | ||||| || || || || | |||| Sbjct 34520432 TGTCGACGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTT 34520488 Query 35721 TCACAAATATCTGCAT 35736 ||||||| || ||||| Sbjct 34520489 TCACAAAAATTTGCAT 34520504 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||| |||| ||| || | || || |||||||| || ||||| Sbjct 34537303 CTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAA 34537362 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||||| || | | ||||| ||| |||||| || | | | Sbjct 34537363 GATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGGATCTTGGCTTTGACATT 34537422 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| |||||||||| ||||| || || || |||||||| || Sbjct 34537423 ATCGATGGTATCTGAACTC---TCCACCTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTT 34537479 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 34537480 CACAAAGATCTGCAT 34537494 Score = 109 bits (120), Expect = 5e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || || ||||||||||||| ||| | |||| || Sbjct 34537741 CACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTC 34537800 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||||||| ||||| ||||| | |||||| |||| |||| | |||||| ||| Sbjct 34537801 CAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCCGGGGGAATTCCCTCCTTATCCTG 34537860 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||| | |||| | | |||||| |||| || ||||| | ||||| | Sbjct 34537861 GATCTTAGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TCAACCTCGAGAGTGATGG 34537916 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || | || ||||| || |||||||| Sbjct 34537917 TCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 34537950 Score = 107 bits (118), Expect = 2e-18 Identities = 156/215 (73%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || |||||| || ||||||||||| |||||||| | |||| || Sbjct 34537969 CACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTCCTACCGTCCTC 34538028 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC-CGAAGGAACGCTCTCCTTGTCCA 35645 |||||||| || || || ||||||| |||||| || | ||| | || |||||||| Sbjct 34538029 GAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATCCCTTCCCTTGTCCT 34538088 Query 35646 TGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATC 35701 |||||| ||| | |||| | | ||||| |||| || ||||| | |||||| Sbjct 34538089 GGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATC 34538144 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || | |||||||| || |||||||| Sbjct 34538145 GTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 >seq3 Length=27879571 Score = 122 bits (134), Expect = 8e-23 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | ||||||||| | || |||||| || ||||||||||| ||| Sbjct 13775138 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 13775079 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || || |||||||| || ||||| || | || ||||||||| | ||| Sbjct 13775078 AGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 13775019 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || || |||||| |||||| ||| | | | | | ||||| ||| |||| Sbjct 13775018 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCT---TTCC 13774962 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| || || ||||| || |||||||| |||||||| || ||||||| Sbjct 13774961 ACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATTC 13774910 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||| | || |||||| || ||||||||||| || Sbjct 183779 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 183720 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || || |||||||| || ||||| |||| ||||||||||||| || Sbjct 183719 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 183660 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| ||| || || | | |||| | | ||||| || ||||| Sbjct 183659 ATTCCCTCCTTGTCC-TGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 183601 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || || | |||||||| || || ||||| Sbjct 183600 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||| |||||||| || | || || | || || ||||||||||| ||||| Sbjct 13775331 CTCCTTTTGAATATTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCAGCAAA 13775272 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | || ||||||||||| ||||| || |||||||||| |||||| |||| | | Sbjct 13775271 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 13775212 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| || ||||||| || || || || || || | || || Sbjct 13775211 ATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTT 13775155 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 13775154 CACAAAGATCTGCAT 13775140 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || | ||||| || | || ||| |||||||||||||| || || Sbjct 13774454 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 13774395 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| || |||||||| || ||||| |||| || |||||||| | || Sbjct 13774394 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 13774335 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| ||||||| ||| | | | | | ||||| ||| ||| Sbjct 13774334 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCT---TTCA 13774278 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 ||||| | ||||| || || || || | ||||||||||| ||||||| ||||| Sbjct 13774277 ACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCA-TCTGT 13774224 Score = 111 bits (122), Expect = 1e-19 Identities = 168/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | ||||| || || || ||||||||||||||||| || | Sbjct 13774912 TTCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTG 13774853 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | |||| |||| |||| ||| ||||| ||||| || | || |||||| || | | Sbjct 13774852 CAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 13774793 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGAT 35683 ||| | |||||||||| |||| ||||||| | ||| | | || || ||| | Sbjct 13774792 GAATACCCTCCTTGTCCTGGATC-TTTGCTTTAACATTGTCAATTGTATCAGAGCT---T 13774737 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||||||| ||||| || || || || | || |||||||| || ||||||| Sbjct 13774736 TCCACCTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATTC 13774682 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | ||| ||||| | || ||||||||||||||||||||| ||| Sbjct 13656678 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 13656619 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| || | | ||||||||| | || Sbjct 13656618 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 13656559 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | ||| || ||| |||||| ||||| |||| | | ||||| ||| || Sbjct 13656558 ATACCCTCTTTATCCTGAATCTTTGCCTTCA-CGTTGTCAATGGTGTCAGAACTC---TC 13656503 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || ||||| || || | ||| |||||||| || ||||| Sbjct 13656502 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 13656452 Score = 100 bits (110), Expect = 3e-16 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||||||||| || || || || | || | | || || Sbjct 13657117 CACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTC 13657058 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| ||||| ||||||| ||||||||| | ||||| | |||||| ||| | Sbjct 13657057 AAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTATCC-T 13656999 Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 || ||| || |||| | | | | ||||| ||| |||||| |||| ||||| | Sbjct 13656998 GAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGG 13656942 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || | || || ||||| || ||||| Sbjct 13656941 TTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| || | || | | | || || |||||||| || || || Sbjct 13657327 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAA 13657268 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | || ||||||||| | || | || |||||| ||| ||||| |||| | | Sbjct 13657267 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTTGGCTTTCACATT 13657208 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||| || ||| || ||||||| || || || || || |||| |||||| Sbjct 13657207 GTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCTGTCAGAGTTTT 13657151 Query 35722 CACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 13657150 GACAAAGATCTGCAT 13657136 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | | ||||||||| || | || ||||| || ||||||||||| || Sbjct 13841530 CCACCACAAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCA 13841589 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || || ||||| || || ||||| || | || ||||||||| | |||| Sbjct 13841590 AGAGTGTGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 13841649 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATTCC 35686 | || |||||||||| |||||| ||| | | | | | || ||| ||| || Sbjct 13841650 ATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTC---TCA 13841706 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || ||||| || | || || ||||| || ||||| Sbjct 13841707 ACCTCCAAAGTGATTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 35505 TATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAAT 35564 || |||| || | ||||||||||| | || | || ||| ||||| || || |||| Sbjct 9477433 TAGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAAT 9477492 Query 35565 CGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCG 35624 | || | |||||| | || |||| ||||||||| ||||| |||| | |||||| || | Sbjct 9477493 CTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTG 9477552 Query 35625 AAGGAACGCTCTCCTTGTCC 35644 ||| | || ||||||||| Sbjct 9477553 GAGGGATGCCTTCCTTGTCC 9477572 Score = 82.4 bits (90), Expect = 7e-11 Identities = 167/243 (69%), Gaps = 9/243 (4%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | || | ||||| |||| || ||||||||||| ||||| || || Sbjct 13656450 CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 13656391 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| |||| | |||||||| | ||| Sbjct 13656390 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 13656331 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGATTC 35685 | || ||||| || ||| ||| || || | | | | | ||||| ||| ||| Sbjct 13656330 ATGCCTTCCTTATCTTGGAT-TTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTC 13656275 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGC 35745 ||||| | ||||| || || || || | ||| || || || ||||||| ||||| | | Sbjct 13656274 AACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCA-TCTGTTCTC 13656216 Query 35746 ACA 35748 ||| Sbjct 13656215 ACA 13656213 >seq2 Length=33308843 Score = 122 bits (134), Expect = 8e-23 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | ||||||||| | || ||| || |||||||||||||| ||| Sbjct 6938605 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 6938664 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | |||| || |||||||| || ||||| || | || ||||||||| | ||| Sbjct 6938665 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 6938724 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || || |||||| |||||| ||| | | | | ||||| ||| |||| Sbjct 6938725 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCT---TTCC 6938781 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| || || ||||| || |||||||| |||||||| || ||||||| Sbjct 6938782 ACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATTC 6938833 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||||||||||||||| |||| || | | | || || ||||||||||| ||||| Sbjct 6938412 CTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 6938471 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | || ||||||||| | ||||| || ||||||||| |||||| |||| | | Sbjct 6938472 TATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACATT 6938531 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| || ||||||| || || || || || || | || || Sbjct 6938532 ATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCTT 6938588 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 6938589 CACAAAGATCTGCAT 6938603 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | ||||| || || ||| ||||||||||||||||| || | Sbjct 6938831 TTCCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCTG 6938890 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | |||| |||| |||| ||| ||||| ||||| || | || |||||| || | | Sbjct 6938891 CAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 6938950 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | |||||||||| ||| ||| ||| | | | | | || ||| ||||| Sbjct 6938951 GGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCA 6939010 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||| ||||| || || || || | || || ||||| |||||||||| Sbjct 6939011 CCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATTC 6939061 Score = 104 bits (114), Expect = 2e-17 Identities = 172/246 (70%), Gaps = 7/246 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || | ||||| || | || ||| ||||| |||||||| || || Sbjct 6939288 CCACCACGGAGTCTGAGAACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTATTCAGCG 6939347 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || ||| |||| || |||||||| || ||||| |||| || || |||||| ||| Sbjct 6939348 AGTGTCCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTCGGTCCGGGGGA 6939407 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| ||||||| || | | | | | ||||| ||| ||| Sbjct 6939408 ATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCT---TTCA 6939464 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGCA 35746 ||||| | ||||| || || || || | ||||||||||| ||||||| ||||| || Sbjct 6939465 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCA-TCTGTTGACA 6939523 Query 35747 CACACA 35752 || ||| Sbjct 6939524 CAAACA 6939529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | ||||| || | ||| ||||||||| || |||||||||| Sbjct 6939059 TTCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGG 6939118 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||| || | || || ||||| || || ||||| || | || |||||| || | | Sbjct 6939119 CAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 6939178 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | || |||||||||| ||||||| ||| | | | | | || || ||| | Sbjct 6939179 GTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTC---T 6939235 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||| || ||||| || || || || | ||| || ||||| |||||||| Sbjct 6939236 CAACCT-CAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 >seq4 Length=23292877 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 18773385 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18773326 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | || Sbjct 18773325 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18773267 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || || ||||| | ||||||| Sbjct 18773266 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 18773207 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 18773206 CGAAGATCTGCAT 18773194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 35505 TATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAAT 35564 || |||| || | | ||||||||||| || | || ||||||||| |||||||||| Sbjct 15563265 TAGTTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAAT 15563324 Query 35565 CGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCG 35624 | || | |||| | || ||||| ||||| || ||||| |||| | ||| || || | Sbjct 15563325 CCGCAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTG 15563384 Query 35625 AAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATT 35684 ||| | || || |||||| |||||| || | | | | | || || || | Sbjct 15563385 GAGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTACTCT 15563444 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | ||||| || || || |||| ||||||||| || || ||||| Sbjct 15563445 CGACCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCAT 15563496 >seq5 Length=29328693 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || || ||||||||||| || || | || |||| |||||| || || || Sbjct 19804623 CTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGCTTTCCGGCGAA 19804564 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 ||||||| ||||| |||| || | | |||||| | | ||| | || || || | | Sbjct 19804563 GATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTAT-CTTGAACCTTGGCTTTGACAT 19804505 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | || || |||| |||||||||| ||||| || || || |||||||| | Sbjct 19804504 TGTCAATGGTATCGGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCT 19804448 Query 35721 TCACAAATATCTGCAT 35736 ||||||| |||||||| Sbjct 19804447 TCACAAAAATCTGCAT 19804432 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| || | || || | || |||| |||||| || || || Sbjct 21080855 CTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCCTCCAACTGCTTGCCAGCGAA 21080914 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || |||||||||| |||||| ||| | || Sbjct 21080915 GATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GT 21080973 Query 35665 TGCC-ACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | |||||| ||| |||||||| | ||||| || || ||||| | |||| Sbjct 21080974 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTT 21081030 Query 35721 TCACAAATATCTGCAT 35736 |||| ||||||||||| Sbjct 21081031 TCACGAATATCTGCAT 21081046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450776424763840