Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 seq3 143 3e-29 seq2 123 3e-23 seq6 116 4e-21 seq1 114 1e-20 >seq4 Length=23292877 Score = 143 bits (158), Expect = 3e-29 Identities = 181/244 (74%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| ||||| | |||||| ||||| || || || |||||||| |||||||| || Sbjct 15563268 TTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG 15563327 Query 134545 CAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| || || | || || || || ||||| ||||| |||| | ||| ||||| || Sbjct 15563328 CAAGAGTTCTGCCA-TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGA 15563386 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| || || || || |||||| ||| | || || || | || Sbjct 15563387 GGGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATC--ACTACTCT 15563444 Query 134664 --ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 || || | ||| ||||| || ||||| | |||||| |||||||||||||| ||||||| Sbjct 15563445 CGACCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATTGTTTT 15563504 Query 134722 TGTT 134725 |||| Sbjct 15563505 TGTT 15563508 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || || ||||| || |||||||||||| | Sbjct 18773420 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18773361 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || || || | |||||||| || ||||| Sbjct 18773360 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 18773301 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 18773300 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 18773241 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || |||| ||||| ||||| || ||||| Sbjct 18773240 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18773194 >seq3 Length=27879571 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||||| | ||| |||||||| || |||||||||||||| |||||||| || Sbjct 13656450 CCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 13656391 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || |||||||||| | ||||| || || || Sbjct 13656390 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 13656331 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| ||||| |||||| ||| | ||||| || ||| || Sbjct 13656330 ATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCAACC 13656271 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| |||||||| || ||||| Sbjct 13656270 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 13656224 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| | ||| || || |||||||| || |||||||| || ||| |||||| Sbjct 13841539 AGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGTGA 13841598 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || |||||||| ||||||||||| | | |||||| || || || ||||| || Sbjct 13841599 CCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCC 13841658 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| ||| ||||| || | ||| ||||| || || || | ||| Sbjct 13841659 TTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCGGAACTCTCAACCTCCAAAGTG 13841718 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| | || ||||| || |||||||| Sbjct 13841719 ATTGTCTTACCGGTGAGGGTCTTAACAAAGATTTGCAT 13841756 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | ||| || || |||||||| ||||| |||||||| || Sbjct 13656906 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCA 13656847 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || |||||||| ||||||||||| | | |||||| || || || Sbjct 13656846 AGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 13656787 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| || ||||| ||| ||||| || | ||| || || ||| || Sbjct 13656786 ATGCCCTCTTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACC 13656727 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || ||||| | || || || || |||||||| Sbjct 13656726 TCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 13656680 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||||| | || ||||| || || |||||||||||||| |||||||| || Sbjct 13841986 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAACA 13842045 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||||| || || ||||| || || |||||||||| | || || || || || Sbjct 13842046 AGGGTGTGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTCCGGGGGG 13842105 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || ||||| |||||| || | ||||| || ||| || Sbjct 13842106 ATGCCTTCCTTGTCGTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAACC 13842165 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| || ||||| || ||||| Sbjct 13842166 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 13842212 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||||| | ||| ||||| || ||||| || ||||||||||||||||| || Sbjct 13774454 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 13774395 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| ||||| |||| | ||||| || || || Sbjct 13774394 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 13774335 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || ||| ||||| ||| | ||||| || ||| || Sbjct 13774334 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 13774275 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | ||||| || || || ||||| Sbjct 13774274 TCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || ||||| || |||||||| || ||| ||| | || || ||||| Sbjct 183755 TGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCCATCCTCAAGCTGC 183696 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| ||||| |||| ||||||||| || || || || || || || || ||||| || Sbjct 183695 TTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTG 183636 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | ||||| || || ||||| || || || || || || ||||| Sbjct 183635 GCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTG 183576 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||||| |||||||||||||| Sbjct 183575 AGGGTTTTCACGAAAATTTGCAT 183553 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| ||||||||||| || ||||| ||| || Sbjct 13657125 AGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTT 13657066 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || |||||||||||||| | |||||| || || || || || || Sbjct 13657065 CCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCCTCC 13657006 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| ||| || || | ||||| || |||||| || | ||| Sbjct 13657005 TTATCCTGAATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCACTTCCAAAGTG 13656946 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| | || || || || |||||||| Sbjct 13656945 ATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 13656908 Score = 109 bits (120), Expect = 6e-19 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAG--TCGTCGAGC 134567 || || || || ||||| || |||||||| || |||| |||| | || || ||| Sbjct 13775114 TGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCA---GTGTCCTACCATCCTCAAGC 13775058 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || |||||||| || | | |||||| || || || ||||||||||| || ||||| Sbjct 13775057 TGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATC 13774998 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 ||| ||||| || | |||||| || |||||| || | |||||| ||||| || Sbjct 13774997 TTTGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATAGTTTTCCCT 13774938 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| || || || ||||||||| Sbjct 13774937 GTCAAAGTCTTCACAAAGATTTGCATT 13774911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| ||||||||||||||||| || | | |||| | || || ||||| Sbjct 13656654 TGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTCAAGCTGC 13656595 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | | |||||| || || || || || ||||| || ||||| ||| Sbjct 13656594 TTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGAATCTTT 13656535 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | ||||| || || || || | || |||||||| || || Sbjct 13656534 GCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTCCCAGTG 13656475 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || || || |||||||| Sbjct 13656474 AGAGTCTTCACAAAGATTTGCAT 13656452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || ||||||||||||||||||||||| ||| || ||| || | |||||| ||| Sbjct 13774880 GTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCT 13774821 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| || | | ||||||||| || || || || || || || || || ||| ||| Sbjct 13774820 GCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTA 13774761 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | ||| || || |||||| || | || || || || || || | || Sbjct 13774760 ACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTTCCCAGTAAGGGTC 13774701 Query 134697 TTAACGAAAATTTGCATT 134714 || || || ||||||||| Sbjct 13774700 TTCACAAAGATTTGCATT 13774683 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| ||||||||||| || ||||| ||| || || || ||||| Sbjct 13841326 TGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCCATCCTCAAGCTGC 13841385 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||||||||||||||| | || || || || || || || || || ||||||||||| Sbjct 13841386 TTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGAATTTTA 13841445 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | ||||| || ||| || || | | | |||||||| || || Sbjct 13841446 GCTTTCACATTATCAATGGTGTCAGAGCTTTCGACTTCCACAATGATGGTTTTGCCAGTA 13841505 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 13841506 AGGGTCTTGACAAAGATTTGCAT 13841528 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || || | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 13774684 TTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTG 13774625 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | || | || || ||||||||||| ||||| || | | ||||||||| || | Sbjct 13774624 CGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 13774565 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || ||||| ||| ||||| || | |||||| || || | Sbjct 13774564 GGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCTCAA 13774505 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || ||||| || || || | ||| || || || || ||||| Sbjct 13774504 CCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 13774456 >seq2 Length=33308843 Score = 123 bits (136), Expect = 3e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || || || || || || ||||||||||| || |||| | || ||| || ||||| Sbjct 6938629 TGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCC-GTCCTCAAGCTG 6938687 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || |||||||| || | | |||||| || || || ||||||||||| || ||||| || Sbjct 6938688 CTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATCTT 6938747 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||||| || | |||||| || |||||| || | |||||||||||| ||||| Sbjct 6938748 TGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATGGTTTTCCCGGT 6938807 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || |||||||||||| Sbjct 6938808 CAAAGTCTTCACAAAAATTTGCATT 6938832 Score = 104 bits (114), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || || | ||| ||||| || || || |||||||| || ||||| ||| Sbjct 6939059 TTCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGG 6939118 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| |||| | || || ||||||||||| ||||| || | | ||||||||| || | Sbjct 6939119 CAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 6939178 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 ||||||| || || || || || ||| ||||| || | ||| || || || | Sbjct 6939179 GTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTCTCAA 6939238 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || ||||| || || || | ||| ||||| || || ||||| Sbjct 6939239 CCTC-AATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 6939286 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || ||||||||||||||||||||||| ||| || ||| || | |||||| ||| Sbjct 6938863 GTAGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCT 6938922 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| || | | ||||||||| || || || || || || || || |||||| ||| Sbjct 6938923 GCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTG 6938982 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | ||| ||||| |||||| || | || || || || || || | || Sbjct 6938983 ACATTGTCAATTGTATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTC 6939042 Query 134697 TTAACGAAAATTTGCATT 134714 || || || || |||||| Sbjct 6939043 TTTACAAAGATCTGCATT 6939060 >seq6 Length=38222195 Score = 116 bits (128), Expect = 4e-21 Identities = 143/194 (74%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 134524 CCTTT-TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || |||||||||||| | | |||| | ||| |||||||| || || || || Sbjct 22063132 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 22063073 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || | |||||||||||| || || |||||||| || ||||| || || ||||| | Sbjct 22063072 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22063013 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | |||||| ||||| |||||||| ||||| || || |||| ||||| ||| Sbjct 22063012 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 22062953 Query 134703 AAAATTTGCATTTT 134716 || || ||||| || Sbjct 22062952 AATATCTGCATCTT 22062939 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || || || ||||| || |||||||||||| | Sbjct 34520278 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 34520337 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| || || || || || | | |||||| || || || Sbjct 34520338 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 34520397 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || || Sbjct 34520398 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGACGGTGTCGGAGCTCTCGACC 34520457 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||||| ||||| || ||||||||||| Sbjct 34520458 TCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAAATTTGCAT 34520504 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || || || ||||| || |||||||||||| | Sbjct 34538181 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 34538240 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| || || || || || | | |||||| ||||| || Sbjct 34538241 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 34538300 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || || Sbjct 34538301 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACC 34538360 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | ||||| ||||| || ||||| Sbjct 34538361 TCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 34538407 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||| ||||| ||||||||||| || | Sbjct 34519594 CCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 34519653 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| ||||| ||||| ||||| | ||||| || || || Sbjct 34519654 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGG 34519713 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || |||||| || | || || || || || Sbjct 34519714 ATCCCTTCCTTATCCTGGATCTTGGCTTTGACATTATCAATGGTATCCGAGCTCTCAACC 34519773 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| || || || ||||| || || ||||| ||||| Sbjct 34519774 TCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 >seq1 Length=22681039 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || || ||||| || |||||||||||| | Sbjct 22555133 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22555192 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| ||||||||||| || || || || | |||||||| || ||||| Sbjct 22555193 AGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 22555252 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || || || || | |||||||| || ||||| Sbjct 22555253 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACC 22555312 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | || || || || || |||| ||||| ||||| || ||||| ||| Sbjct 22555313 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 22555363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505379144320960