Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq3048 554 5e-153 seq2811 450 2e-121 seq2823 360 2e-94 seq838 351 1e-91 seq929 315 9e-81 seq990 181 1e-40 seq1012 118 1e-21 >seq3048 Length=155691 Score = 554 bits (614), Expect = 5e-153 Identities = 711/974 (73%), Gaps = 6/974 (1%) Strand=Plus/Minus Query 177870 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177929 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 1396 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1337 Query 177930 GCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 177988 |||||| ||||| || || | || ||| | ||||| || || || || || || || || Sbjct 1336 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 1278 Query 177989 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGT 178048 |||||||| || |||| || | | || || ||||| || || || ||||| || | Sbjct 1277 TCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTAT 1218 Query 178049 TCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 178108 || |||| || || ||| | ||||| || || || |||||||| || || |||| Sbjct 1217 CCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGA 1158 Query 178109 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTAT 178168 ||| ||| | || |||||||| |||| | || | || | |||||| | ||||| | Sbjct 1157 TGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 1098 Query 178169 --CTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGG 178226 || ||| || ||||| ||||||||||||||| | |||| | ||||||||||| ||| Sbjct 1097 AGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGG 1040 Query 178227 ATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCT 178286 || ||| ||||| || ||||| || ||||| || | || || ||| || |||| || Sbjct 1039 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCA 980 Query 178287 TTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTAC 178346 | |||||||| |||||||||| ||||| || || ||||||||||| ||||||| | Sbjct 979 ATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTC 920 Query 178347 ATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTC 178406 ||| |||| |||||||| || |||||||| || |||||||| || |||||| | ||||| Sbjct 919 ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTG 860 Query 178407 GCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCA 178466 || |||||||| || ||||| || |||||||| ||||| ||||||||||| || ||| Sbjct 859 GCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGT 800 Query 178467 CTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAA 178526 | | | ||||| || |||| ||||| || | ||||| | ||||| ||||| Sbjct 799 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 740 Query 178527 GAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATAT 178586 ||||| || || || ||||| || || ||||| || || || || ||||||||||||||| Sbjct 739 GAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 680 Query 178587 GCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGA 178646 ||| |||||||| || ||||| | ||||||||| | || || ||||||||||| || Sbjct 679 GCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGT 620 Query 178647 ATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTC 178706 |||||||||||||| | || | ||||| ||||| || ||| | ||||| || || ||| Sbjct 619 ATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTC 560 Query 178707 AACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAAC 178766 || || || | | || | ||||| ||||| | || || ||||| || | ||||| Sbjct 559 AATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAAC 500 Query 178767 CGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGAT 178826 || || ||| || |||||||| ||||| || || || || || || ||||| || || Sbjct 499 CGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGAC 440 Query 178827 CTTGCAGCAGCTGA 178840 || || || | ||| Sbjct 439 CTAGCTGCTGTTGA 426 Score = 470 bits (520), Expect = 2e-127 Identities = 699/989 (71%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292 |||| |||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 33681 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 33740 Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 33741 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 33800 Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTTACGGCAGCTG 179412 |||| ||||| || | || ||||||||| | || ||| |||||| | || || || | Sbjct 33801 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAG 33860 Query 179413 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179472 | || || |||||| | | | | || ||| | | |||| ||||||||||| | | Sbjct 33861 TTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 33920 Query 179473 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 179532 | || |||| || ||||| ||| | || || || |||| || || ||||| |||| Sbjct 33921 AAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTCGCTCTGCACG 33980 Query 179533 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGT 179591 | || |||| || || ||||||||| | | ||||||||||||||||| ||| | | Sbjct 33981 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 34040 Query 179592 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTC 179651 | ||||||| ||||| ||||| || || ||||| |||||||| || || ||| ||| Sbjct 34041 TAC-GACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34099 Query 179652 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 179711 || || ||||| | || ||||| |||||| || ||||| |||||||| || || Sbjct 34100 CTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCAGCT 34159 Query 179712 ATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCAT 179771 || || | ||| | || || | || || || || || ||||| | ||||| || ||| Sbjct 34160 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 34219 Query 179772 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTACT 179831 ||||||||||||||||| | | || | || ||| | | ||||| ||||| | ||| Sbjct 34220 ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACC 34279 Query 179832 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCG 179891 ||||| ||||| || | ||||||||| || |||||||| || || ||| | | Sbjct 34280 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 34339 Query 179892 ACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 179951 || || | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| Sbjct 34340 ACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 34399 Query 179952 GGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 180011 || |||| ||||| || || || ||| | ||||| || ||||| ||||| || || | Sbjct 34400 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 34459 Query 180012 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGAT 180071 ||| |||||| || |||| | | ||||| || || ||||| ||||| || || Sbjct 34460 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 34519 Query 180072 TTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAG 180131 ||||| |||||| ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 34520 TTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 34579 Query 180132 AACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAG 180191 || ||||| | || ||||| | ||||| ||| |||| | ||||| || ||||| Sbjct 34580 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 34639 Query 180192 TCATTCGTATTCCCAGAAGAAGTTCTGCC 180220 | ||||||| || || ||||| || Sbjct 34640 AACCTTATATTCCCTGAGGAGGTTCTACC 34668 >seq2811 Length=1036 Score = 450 bits (498), Expect = 2e-121 Identities = 679/960 (71%), Gaps = 4/960 (0%) Strand=Plus/Plus Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292 |||| |||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 75 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 134 Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 135 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 194 Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTTACGGCAGCTG 179412 |||| ||||| || | || ||||||||| | || ||| |||||| | || || || | Sbjct 195 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAG 254 Query 179413 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179472 | || || |||||| | | | | || ||| | | |||| ||||||||||| | | Sbjct 255 TTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 314 Query 179473 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 179532 | || |||| || ||||| ||| | || || || |||| || | | |||| |||| Sbjct 315 AAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG-CTCTGCACG 373 Query 179533 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGT 179591 | || |||| || || ||||||||| | | ||||||||||||||||| ||| | | Sbjct 374 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 433 Query 179592 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTC 179651 | ||||||| ||||| ||||| || || ||||| |||||||| || || ||| ||| Sbjct 434 TAC-GACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTC 492 Query 179652 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCG-GC 179710 || || ||||| | || ||||| |||||| || ||||| |||||||| || || Sbjct 493 CTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCTAGC 552 Query 179711 GATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCA 179770 || || | ||| | || || | || || || || || ||||| | ||||| || || Sbjct 553 TATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 612 Query 179771 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTAC 179830 |||||||||||||||||| | | || | || ||| | | ||||| ||||| | ||| Sbjct 613 TATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTAC 672 Query 179831 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTC 179890 ||||| ||||| || | ||||||||| || |||||||| || || ||| | | Sbjct 673 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCC 732 Query 179891 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 179950 || || | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| Sbjct 733 AACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 792 Query 179951 CGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 180010 || |||| ||||| || || || ||| | ||||| || ||||| ||||| || || | Sbjct 793 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 852 Query 180011 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 180070 ||| |||||| || |||| | | ||||| || || ||||| ||||| || || Sbjct 853 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGA 912 Query 180071 TTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAA 180130 ||||| |||||| ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 913 CTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 972 Query 180131 GAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGA 180190 || ||||| | || ||||| | ||||| ||| |||| | ||||| || ||||| Sbjct 973 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1032 >seq2823 Length=1025 Score = 360 bits (398), Expect = 2e-94 Identities = 413/553 (75%), Gaps = 2/553 (0%) Strand=Plus/Plus Query 178290 GGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATG 178349 |||||||| |||||||||| ||||| || || ||||||||||| ||||||| |||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 178350 CTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCC-ACATGTTGGGTGTCGC 178408 |||| |||||||| || |||||||| || |||||||| || | ||||| | ||||| || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 178409 AGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 178468 |||||||| || ||||| || |||||||| ||||| ||||||||||| || ||| | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 190 Query 178469 CGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGA 178528 | | ||||| || |||| ||||| || | ||||| | ||||| ||||| || Sbjct 191 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 250 Query 178529 AGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGC 178588 ||| || || || ||||| || || ||||| || || || || ||||||||||||||||| Sbjct 251 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 310 Query 178589 TTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAAT 178648 | |||||||| || ||||| | ||||||||| | || || ||||||||||| || || Sbjct 311 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 370 Query 178649 CTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAA 178708 |||||||||||| | || | ||||| ||||| || ||| | ||||| || || ||||| Sbjct 371 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 430 Query 178709 CCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCG 178768 || || | | || | ||||| ||||| | || || ||||| || | ||||||| Sbjct 431 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 490 Query 178769 TG-CCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATC 178827 | | ||| || |||||||| ||||| || || || || || || ||||| || || | Sbjct 491 CGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACC 550 Query 178828 TTGCAGCAGCTGA 178840 | || || | ||| Sbjct 551 TAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 351 bits (388), Expect = 1e-91 Identities = 441/598 (74%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 177870 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177929 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 597 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 538 Query 177930 GCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 177988 |||||| ||||| || || | || ||| | ||||| || || || || || || || || Sbjct 537 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 479 Query 177989 CCGTG-AACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTG 178047 |||| |||| || |||| || | | || || ||||| || || || ||||| || Sbjct 478 TCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 419 Query 178048 TTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTG 178107 | || |||| || || ||| | ||||| || || || |||||||| || || ||| Sbjct 418 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 359 Query 178108 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTA 178167 |||| ||| | || |||||||| |||| | || | || | |||||| | ||||| Sbjct 358 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 299 Query 178168 T--CTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTG 178225 | || ||| || ||||| ||||||||||||||| | |||| | ||||||||||| || Sbjct 298 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTG 241 Query 178226 GATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCC 178285 ||| ||| ||||| || ||||| || ||||| || | || || ||| || |||| || Sbjct 240 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCC 181 Query 178286 TTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTA 178345 | |||||||| |||||||||| ||||| || || ||||||||||| ||||||| Sbjct 180 AATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 121 Query 178346 CATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGT 178405 |||| |||| |||||||| || |||||||| || |||||||| || |||||| | ||||| Sbjct 120 CATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGT 61 Query 178406 CGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCT 178463 || |||||||| || ||||| || |||||||| ||||| ||||||||||| || ||| Sbjct 60 GGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCT 3 >seq929 Length=1222 Score = 315 bits (348), Expect = 9e-81 Identities = 414/568 (73%), Gaps = 7/568 (1%) Strand=Plus/Plus Query 177870 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177929 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 658 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 717 Query 177930 GCAACTATCTGT--TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCA 177987 |||||| ||||| || | | || ||| | ||||| || || || || || || || | Sbjct 718 GCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTA 776 Query 177988 TCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTG 178047 | |||||||| || |||| || | | || || ||||| || || || ||||| || Sbjct 777 TTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 836 Query 178048 TTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTG 178107 | || |||| || || ||| | ||||| || || || |||||||| || || ||| Sbjct 837 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 896 Query 178108 ATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTA 178167 |||| ||| | || |||||||| |||| | || | || | |||||| | ||||| Sbjct 897 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 956 Query 178168 T--CTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTG 178225 | || ||| || ||||| ||||||||||||||| | |||| | ||||||||||| || Sbjct 957 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTG 1014 Query 178226 GATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCC 178285 ||| ||| ||||| || ||||| || ||||| || | || || ||| || |||| || Sbjct 1015 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCC 1074 Query 178286 TTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTA 178345 | |||||||| |||||||||| ||||| || || ||||||||||| ||||||| Sbjct 1075 AATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 1134 Query 178346 CATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGT 178405 |||| |||| |||||||| || |||||||| || |||||||| || |||||| | ||||| Sbjct 1135 CATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGT 1194 Query 178406 CGCAGGTGTATTCGGTGGTTCACTGTTC 178433 || |||||||| || ||||| || ||| Sbjct 1195 GGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 181 bits (200), Expect = 1e-40 Identities = 235/322 (73%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 179901 GAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCT-GGTCGCAGATCTTCGGTATTGC 179959 ||||| |||||||| |||||||| || |||||||| | |||| || ||||| || |||| Sbjct 949 GAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTGGTCCCAAATCTTTGGGGTTGC 890 Query 179960 ATTTTCTAACAAGCGGTGGCTT-CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTAT 180018 ||||| || || || | | || ||||| || ||||| ||||| || || | ||| ||| Sbjct 889 TTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTAT 830 Query 180019 GGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAA 180078 ||| || |||| | | ||||| || || ||||| ||||| || || ||||| Sbjct 829 GGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTT 770 Query 180079 GTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAGAACATTC 180138 |||||| ||| | ||||| |||||||| || |||||||| ||||||||||| || |||| Sbjct 769 CTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTC 710 Query 180139 TTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCATTCG 180198 | | || ||||| | ||||| ||| |||| | ||||| || ||||| | Sbjct 709 TCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTA 650 Query 180199 TATTCCCAGAAGAAGTTCTGCC 180220 ||||||| || || ||||| || Sbjct 649 TATTCCCTGAGGAGGTTCTACC 628 >seq1012 Length=1043 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 179988 TTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTT 180047 || ||||| ||||| || || | ||| |||||| || |||| | | ||||| Sbjct 1043 TTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTG 984 Query 180048 GCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCC 180107 || || ||||| ||||| || || ||||| |||||| ||| | ||||| |||||||| Sbjct 983 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCT 924 Query 180108 GAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTG 180167 || |||||||| ||||||||||| || ||||| | || ||||| | ||||| ||| || Sbjct 923 GAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATG 864 Query 180168 GCACCAGTTGATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCC 180220 || | ||||| || ||||| | ||||||| || || ||||| || Sbjct 863 GCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605986511034240