Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq2 127 2e-24 seq6 122 8e-23 seq4 109 5e-19 seq1 96.9 3e-15 seq5 91.5 1e-13 >seq3 Length=27879571 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||||||| |||| || ||||| ||||| | || Sbjct 183553 ATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 183612 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||| ||||| || || || || || || || Sbjct 183613 GACACCATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 183672 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || | ||| || | ||||||||| Sbjct 183673 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGATTACAAC 183732 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | |||||||| | ||| |||| ||||| || Sbjct 183733 ATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTCTGCGTGGTGGTAT 183782 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| |||| || || |||||||| | ||||||||| || Sbjct 13774912 ATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTCA 13774971 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| ||||| |||||||||||||| || || || || Sbjct 13774972 GACACAATTGATAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 13775031 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || || || ||| | | ||||||||| Sbjct 13775032 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATTACAAC 13775091 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | |||||||| | ||| | || ||||| || Sbjct 13775092 ATACAGAAGGAGTCAACTCTGCATTTGGTGCTCCGTCTACGTGGTGGGAT 13775141 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || ||| | || || | || |||||| || Sbjct 13774684 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACAATCACATTGGAGGTGGAAAGCTCT 13774743 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||| || || ||||| || || || || || ||||| Sbjct 13774744 GATACAATTGACAATGTTAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 13774803 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| ||||| ||| | || || | || |||||| Sbjct 13774804 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 13774863 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || || || |||||| | ||| |||| ||||| || Sbjct 13774864 ATTCAAAAGGAATCAACATTGCACTTGGTTCTCCGTCTGCGTGGTGGAAT 13774913 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || || ||||| ||| | || ||| | || || || || Sbjct 13841757 CATGCAAATCTTTGTTAAGACCCTCACCGGTAAGACAATCACTTTGGAGGTTGAGAGTTC 13841698 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| ||| ||||| ||||| || ||||| || || || || Sbjct 13841697 CGATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCA 13841638 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || ||||| | || || || || || | |||||||| Sbjct 13841637 GCAGAGGCTCATTTTTGCAGGGAAACAGCTAGAGGATGGTCACACTCTTGCAGATTACAA 13841578 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || || | || ||||| |||||| | | |||||||| Sbjct 13841577 CATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCGTCTTTGTGGTGGCAT 13841527 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || |||||| |||| || || || || ||| || Sbjct 13774228 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCTCT 13774287 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| || |||||||| || || || || || || || Sbjct 13774288 GACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAG 13774347 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| || | || ||| | || || | || |||||| Sbjct 13774348 CAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACAAC 13774407 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||| ||| | || |||| | | | || |||||||| Sbjct 13774408 ATTCAAAAAGAGTCCACCCTCCACCTGGTGCTTAGACTCCGTGGTGGCAT 13774457 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || || |||||||| | || ||| | ||||||||| || Sbjct 13656907 CATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTC 13656966 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| |||||||| || || || || || || || || || Sbjct 13656967 TGACACCATAGATAATGTGAAAGCTAAAATTCAGGATAAGGAGGGTATTCCTCCAGACCA 13657026 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || || || | || || | ||| || | || || || Sbjct 13657027 GCAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAA 13657086 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| || | || ||||| | ||| |||| ||||| || Sbjct 13657087 TATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCGGTGGTAT 13657137 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || || || ||||| | || | | | ||||| ||| || Sbjct 13841529 CATGCAAATCTTTGTCAAGACCCTTACTGGCAAAACCATCATTGTGGAAGTCGAAAGCTC 13841470 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| |||||||||||||| || || || || || || || Sbjct 13841469 TGACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCA 13841410 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || | || || | ||| || | || || || Sbjct 13841409 ACAAAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAA 13841350 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| || | || || || | ||| |||| ||||| || Sbjct 13841349 TATTCAAAAGGAGTCCACTCTGCAATTAGTGCTTCGTCTGCGCGGTGGTAT 13841299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || || ||||| || ||| || Sbjct 13656224 ATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTTGAAAGCTCT 13656283 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| ||||| ||||| || |||||||| || || || || Sbjct 13656284 GACACCATCGACAATGTCAAAGCCAAAATCCAAGATAAGGAAGGCATTCCCCCAGACCAG 13656343 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | || || | ||| || | || ||||| Sbjct 13656344 CAAAGACTGATTTTTGCTGGAAAGCAGCTCGAGGATGGACGCACCCTTGCTGACTACAAT 13656403 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| ||||| |||| |||| | | | || |||||||| Sbjct 13656404 ATTCAAAAGGAATCGACTCTACACCTGGTGCTCAGACTCCGCGGTGGCAT 13656453 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||||||||| || ||| | || || | || || || || Sbjct 13657136 ATGCAGATCTTTGTCAAAACTCTGACAGGGAAGACCATAACATTGGAGGTAGAGAGTTCA 13657195 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || ||| || ||||| || || || ||||| || || || || Sbjct 13657196 GATACGATTGACAATGTGAAAGCCAAGATTCAGGATAAGGAGGGCATCCCCCCAGACCAG 13657255 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| ||| || || || | || || | ||| || | ||||||||| Sbjct 13657256 CAGAGGCTCATATTCGCTGGAAAGCAGCTTGAGGATGGGAGGACTCTTGCAGATTACAAC 13657315 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| |||||||| ||| Sbjct 13657316 ATTCAGAAGGAGTCCACC 13657333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || || ||||| || ||| || Sbjct 13842212 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTTGAAAGCTCT 13842153 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||||| || ||||| |||||||| || || || ||| Sbjct 13842152 GACACCATTGATAATGTCAAAGCCAAAATCCACGACAAGGAAGGCATCCCCCCGGACCAA 13842093 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | || || | ||| || || ||||| Sbjct 13842092 CAAAGGCTGATTTTTGCTGGTAAGCAGCTTGAGGATGGACACACCCTTGTTGACTACAAT 13842033 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||||||||| ||||| | || ||||| Sbjct 13842032 ATTCAAAAGGAATCGACTCTTCACCTGGTT 13842003 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| || || ||| | || || | || || || || Sbjct 13774455 CATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTC 13774514 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| ||| ||||| ||||| || ||||| || || ||||| Sbjct 13774515 TGACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCA 13774574 Query 27107 ACAGCGTTTAATATACGCCGGCAAACA---ATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| | | || | ||||||||||| | ||| | | || || || | ||||| Sbjct 13774575 GCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACGCTCG---CAGATTA 13774631 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| ||||| ||| | || |||| | ||| | || ||||| || Sbjct 13774632 CAATATCCAAAAAGAGTCCACCCTCCACCTGGTGCTCCGTCTTCGTGGTGGAAT 13774685 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||||| || || || | || || | || || || || Sbjct 13656451 CATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTC 13656510 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || ||| ||||| || ||||| || || ||||| || || Sbjct 13656511 TGACACCATTGACAACGTGAAGGCAAAGATTCAGGATAAAGAGGGTATCCCACCAGACCA 13656570 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || || || | || || | ||| | | |||||||| Sbjct 13656571 GCAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAA 13656630 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||| ||| | ||||| || | ||| | || |||||||| Sbjct 13656631 CATTCAAAAGGAGTCCACCCTTCATTTAGTGCTTCGTCTACGTGGTGGCAT 13656681 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | || || ||||| ||||| || Sbjct 184237 ATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 184296 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||||||||| || || || ||||| || || Sbjct 184297 GACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAG 184356 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || | || ||| | || || | || ||||| Sbjct 184357 CAGAGGCTTATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACTCTTGCAGACTACAAT 184416 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||| ||| Sbjct 184417 ATCCAGAAGGAGTCTACC 184434 >seq2 Length=33308843 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || || || || ||| | || || | || |||||| ||| Sbjct 6939059 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTCC 6939000 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| |||||| || ||||| || || || || || ||||| Sbjct 6938999 GATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCAG 6938940 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| ||||| ||| | || || | || |||||| Sbjct 6938939 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 6938880 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || ||||| || |||||| | ||| |||| ||||| || Sbjct 6938879 ATTCAAAAGGAATCTACCTTGCACTTGGTTCTCCGTCTGCGTGGTGGAAT 6938830 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| || | |||||| | ||||||||| || Sbjct 6938831 ATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTCA 6938772 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| ||||| |||||||||||||| || || || || Sbjct 6938771 GACACAATTGATAACGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 6938712 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || ||| | ||| | | ||||||||| Sbjct 6938711 CAGAGGCTTATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTACAAC 6938652 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| | |||||||| | ||| | || ||||| || Sbjct 6938651 ATTCAGAAAGAGTCGACTCTGCATTTGGTGCTCCGTCTACGTGGTGGGAT 6938602 Score = 102 bits (112), Expect = 7e-17 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| || || ||| | || || |||| || || || Sbjct 6939287 CATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACA-TTGAGGTTGAGAGTTC 6939229 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | ||||| ||| || || ||||| || |||||||| || ||||| Sbjct 6939228 TGATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCA 6939169 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||||||||||| | || || | ||| || |||||||||| Sbjct 6939168 GCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAA 6939109 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | || |||| | ||| |||| ||||| || Sbjct 6939108 TATCCAAAAGGAGTCTACTCTTCACCTGGTGCTCCGTCTGCGTGGTGGAAT 6939058 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | || || | || || || || Sbjct 6938603 ATGCAGATCTTTGTGAAGACACTTACTGGAAAGACCATAACCTTGGAGGTAGAGAGTTCT 6938544 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||| ||||| ||||| |||||||| || || || || Sbjct 6938543 GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 6938484 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| || || || || | ||||| | ||| | | ||||||||| Sbjct 6938483 CAGAGGCTCATATTTGCTGGTAAGCAGCTTGAAGATGGGAGGACTCTGGCGGATTACAAC 6938424 Query 27168 ATTCAAAAGGAGTCGACC 27185 |||||||||||||||||| Sbjct 6938423 ATTCAAAAGGAGTCGACC 6938406 >seq6 Length=38222195 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || ||||| || || || ||| Sbjct 34537950 ATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAGAGCTCC 34537891 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || || || || || || || || || ||||| Sbjct 34537890 GACACGATTGACAACGTCAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAG 34537831 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| || || ||||| ||| | |||| | |||||||||| Sbjct 34537830 CAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAAT 34537771 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || ||||| | || ||| ||||||| || Sbjct 34537770 ATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGGTAT 34537721 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| ||||| ||| | || ||||| ||||| || ||| Sbjct 34520048 ATGCAAATCTTCGTGAAGACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAGAGCTCC 34519989 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || || || || ||||| || ||||| ||||| Sbjct 34519988 GACACGATTGATAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCAG 34519929 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || |||||||| || | ||| || | |||||||| Sbjct 34519928 CAGAGGTTGATTTTCGCTGGTAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAAT 34519869 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||||||||| | |||||||| Sbjct 34519868 ATCCAGAAGGAGTCGACTCTGCATTTGGT 34519840 Score = 116 bits (128), Expect = 3e-21 Identities = 165/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| | || ||||| || || || ||| Sbjct 34538179 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCC 34538120 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAG-AAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || ||||| | |||| || || || ||||| Sbjct 34538119 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGGAAGGGATCCCCCCAGATCA 34538060 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | |||||| || || | || ||| || |||| | | |||||||| Sbjct 34538059 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGGACCTTGGCTGATTACAA 34538000 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | |||||||| | ||| | || ||||| || Sbjct 34537999 CATCCAGAAGGAGTCAACCCTCCATTTGGTGCTCCGTCTTCGCGGTGGGAT 34537949 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| |||||| | || ||| | || || || || Sbjct 34519820 ATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTCG 34519761 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || || || || || ||||| || ||||| || || Sbjct 34519760 GATACCATTGATAATGTCAAAGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGACCAG 34519701 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||||| || | || ||| || ||| | | ||||||||| Sbjct 34519700 CAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTACAAC 34519641 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| ||| | || ||||| | ||| | || || || Sbjct 34519640 ATTCAGAAGGAGTCCACCCTTCACTTGGTCCTCCGTCTCCGTGGCGG 34519594 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| |||||||||||| | || || || || || || || Sbjct 34538408 CATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTC 34538349 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || || || ||||| || ||||| || ||||| || Sbjct 34538348 CGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 34538289 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||| || || | || ||| | ||| | |||| ||||| Sbjct 34538288 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGACTACAA 34538229 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || |||| | ||| | ||||||| || Sbjct 34538228 CATCCAGAAGGAGTCAACTCTCCACCTGGTGCTCCGTCTCAGGGGTGGTAT 34538178 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| || || || ||| | || ||||| || ||||| | Sbjct 22062942 ATGCAGATATTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTGGAGAGCAGC 22063001 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| |||||||| || || ||||| Sbjct 22063002 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGATCAG 22063061 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || | || ||| | ||| | |||| |||||| Sbjct 22063062 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAAC 22063121 Query 27168 ATTCA-AAAGG 27177 || || ||||| Sbjct 22063122 ATCCAGAAAGG 22063132 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| ||||| || ||||||||| | || || || || || || || Sbjct 34520505 CATGCAAATTTTTGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTC 34520446 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | | || | ||||| || || || ||||| || ||||| || || || || Sbjct 34520445 CGACACCGTCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 34520386 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||| || || | || ||| | ||| | |||| ||||| Sbjct 34520385 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAA 34520326 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | || |||| | ||| | ||||||| || Sbjct 34520325 CATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGTCTCAGGGGTGGTAT 34520275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135 |||| || || |||||||| || || ||||||||| | || || | ||||| || |||| Sbjct 19322136 TTCAGGATAAGGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCCGGTAAGCAAT 19322077 Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGG 27195 ||||||| | || || | ||||||||||| ||||||||||| || | || | | Sbjct 19322076 TGGAAGATGGAAGAACTCTTGCAGATTACAACATCCAAAAGGAGTCAACTCTTCACCTAG 19322017 Query 27196 TTTTGCGTTTGCGGGGTGG 27214 |||| | || ||||||| Sbjct 19322016 TTTTAAGGCTGAGGGGTGG 19321998 >seq4 Length=23292877 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||||||||| ||| | || ||| |||| || || Sbjct 15563496 ATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGTAGT 15563437 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| || || || |||||||||||||| || || |||||| Sbjct 15563436 GATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCCAGATCAA 15563377 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| ||| ||||||| | || || | ||||||||| Sbjct 15563376 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTACAAC 15563317 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || |||||||||||||| | || |||| ||| Sbjct 15563316 ATCCAAAAGGAGTCGACTCTTCACCTGGTGTTG 15563284 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || ||||| || || || ||| | || || || || ||||| | | Sbjct 18773192 CCATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCCT 18773251 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || || | ||||| || || || ||||| || ||||| || || || | Sbjct 18773252 CCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACC 18773311 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| | || | ||||||||| || | || ||| | ||| | |||| |||| Sbjct 18773312 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACA 18773371 Query 27166 ACATTCAAAAGGAGTCGAC 27184 |||| || ||||||||||| Sbjct 18773372 ACATCCAGAAGGAGTCGAC 18773390 >seq1 Length=22681039 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || | || ||||| | ||| Sbjct 22555359 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAGTCCTCC 22555300 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || |||||||| || ||||| || || || || Sbjct 22555299 GACACCATCGATAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGACCAG 22555240 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| ||||| | || ||| | ||| | |||| |||||| Sbjct 22555239 CAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGACTACAAC 22555180 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | || |||| | || | || |||||| Sbjct 22555179 ATCCAGAAGGAGTCGACTCTCCACCTGGTGCTCCGCCTCCGCGGTGGC 22555132 >seq5 Length=29328693 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 || |||||| ||||| || || || ||||||||| | | || || || ||||| || Sbjct 19804203 CAGGCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTC 19804262 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | |||||| || || || ||||| || ||||| || || ||||| Sbjct 19804263 CGACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCA 19804322 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | || | ||||| || || | || ||| | |||| | | || ||||| Sbjct 19804323 ACAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAA 19804382 Query 27167 CATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 19804383 TATCCAGAAGGAGTCGAC 19804400 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||||||||| || ||||| || || |||||| | || || || || ||||| | Sbjct 21081048 CCATGCAGATATTCGTGAAAACCCTAACGGGCAAGACCATCACCCTCGAGGTGGAGAGCT 21080989 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || || | ||||| || || || ||||| || ||||| || || || | Sbjct 21080988 CCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACC 21080929 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||| | | || | ||| ||||| || ||||| || | || | | ||||| | Sbjct 21080928 AGCAGAGGCTCATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACTCTCGCAGATTATA 21080869 Query 27166 ACATTCAAAAGGAGTCGAC 27184 |||| || |||||||| || Sbjct 21080868 ACATCCAGAAGGAGTCTAC 21080850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434901829608960