Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq3048 517 1e-141 seq2823 329 4e-85 seq838 318 7e-82 seq929 315 9e-81 seq793 145 9e-30 seq721 145 9e-30 seq2704 132 6e-26 seq2773 95.1 1e-14 seq672 95.1 1e-14 >seq3048 Length=155691 Score = 517 bits (572), Expect = 1e-141 Identities = 712/992 (72%), Gaps = 8/992 (1%) Strand=Plus/Minus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 1417 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1358 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACC 176231 ||||| || | | | || || | | ||| ||||| |||| || ||||| ||||| Sbjct 1357 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCACC 1299 Query 176232 ACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAA 176291 || || ||||| || |||||||| ||||| || | |||||| |||| || |||||||| Sbjct 1298 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 1239 Query 176292 CATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAAT 176351 || || || || || | |||| | || || || || | ||||| |||||||| Sbjct 1238 TATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 1179 Query 176352 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411 |||||||| || | ||||| |||||| | ||||| || || || || | || |||| Sbjct 1178 ATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGT 1119 Query 176412 ATTCCACTTCCTTATCGGTATCTCAGCTTAC---ATGGGACGCCAATGGGAACTTAGTTA 176468 | |||||| | | ||| | ||||| | ||||| || | ||||||||||||| Sbjct 1118 TCTACACTTCTTACTTGGTGT---AGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTT 1062 Query 176469 CAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGAT 176528 | | || || ||||| |||||||| ||||||||| || || || || | || || | Sbjct 1061 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1002 Query 176529 GGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGG 176588 || |||||| | |||| ||| | ||||||||| || ||||| ||||||||||| || Sbjct 1001 TGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 942 Query 176589 CATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCA 176648 || || ||||| |||||||| ||| ||||||||||||| ||||||||||| || ||||| Sbjct 941 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 882 Query 176649 CCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCA 176708 |||||| || ||||| || || || ||||| ||||| || || || ||| || ||||| Sbjct 881 CCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCA 822 Query 176709 CGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTA 176768 || | | || || ||| | | || || || || ||||| ||||| || | Sbjct 821 TGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 762 Query 176769 CGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTT 176828 ||||||| |||||| ||||| ||||| || || || || ||||| || || ||||| || Sbjct 761 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 702 Query 176829 TGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCT 176888 ||| || | |||||||| |||||| |||||| || || | | | ||||||||| | Sbjct 701 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTT 642 Query 176889 TGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATT 176948 || || | || || || | |||||||| || || | ||| | |||| ||||| || Sbjct 641 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTT 582 Query 176949 CAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCC 177008 |||| | || ||||| || ||||| || ||||| | || | ||| || ||| Sbjct 581 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 522 Query 177009 TACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAA 177068 ||| |||| ||||| | ||||| || || |||||||||||||||||||| || ||||| Sbjct 521 TACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAA 462 Query 177069 TGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||| || ||||| || ||||| ||||||| Sbjct 461 TGCTCATAATTTCCCTCTAGACCTAGCTGCTG 430 Score = 145 bits (160), Expect = 9e-30 Identities = 209/289 (72%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCAT-ACCGTCAGAGAGATACCGTGGTC 19353 ||| ||||| | || |||||||| || ||| | || |||| | ||| | | |||||||| Sbjct 120674 ACCCGTAACTATTCAATATCCTTATGAAAAATTAATCACCG-CGGAGCGTTTCCGTGGTC 120616 Query 19354 GTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTA 19413 | || || | ||| ||||| || ||||| || ||||| || ||||| | ||||| |||| Sbjct 120615 GAATTCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGGGTATGTCCTA 120556 Query 19414 TCAATCTACCAGTGGTGGATTGGGTGATG--AACAAACAGAC-AAAGAAGAAAGAACTTA 19470 | ||||||| || || |||||| || |||| | | | |||||| | ||||| Sbjct 120555 TAGATCTACCCGTTGTTGATTGGAAATTGGAAACAGATATTCGAAAGAAACGATTACTTA 120496 Query 19471 GAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCC 19530 |||| || || || ||| ||||| || || ||||| || || |||||||| | Sbjct 120495 ---ATTACAGTATTGATTTCGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTC 120439 Query 19531 CAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 ||||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 120438 CAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 120390 >seq2823 Length=1025 Score = 329 bits (364), Expect = 4e-85 Identities = 410/559 (73%), Gaps = 2/559 (0%) Strand=Plus/Plus Query 176544 CTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATT 176603 ||| ||| | ||||||||| || ||||| ||||||||||| || || || ||||| || Sbjct 1 CTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTT 60 Query 176604 CAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCA-TTCCATATGC 176662 |||||| ||| ||||||||||||| ||||||||||| || ||||||||| ||| | |||| Sbjct 61 CAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGC 120 Query 176663 TTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTA 176722 | || || || ||||| ||||| || || || ||| || ||||| || | | || | Sbjct 121 TAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAA 180 Query 176723 CTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCG 176782 | ||| | | || || || || ||||| ||||| || | ||||||| ||||| Sbjct 181 CCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCG 240 Query 176783 GACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCT 176842 | ||||| ||||| || || || || ||||| || || ||||| ||||| || | |||| Sbjct 241 GTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCT 300 Query 176843 TCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAG 176902 |||| |||||| |||||| || || | | | ||||||||| | || || | || | Sbjct 301 TCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTG 360 Query 176903 TTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTT 176962 | || | |||||||| || || | ||| | |||| ||||| |||||| | || |||| Sbjct 361 TAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTT 420 Query 176963 TCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATA 177022 | || ||||| || ||||| | || | ||| || ||| ||| |||| |||| Sbjct 421 TTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 480 Query 177023 TCCTTAACCGTG-CAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 177081 | | ||||| | | || |||||||||||||||||||| || ||||||||||| || ||| Sbjct 481 TTATCAACCGCGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTC 540 Query 177082 CCACTTGACCTTGCTGCTG 177100 || || ||||| ||||||| Sbjct 541 CCTCTAGACCTAGCTGCTG 559 >seq838 Length=1002 Score = 318 bits (352), Expect = 7e-82 Identities = 436/604 (72%), Gaps = 9/604 (1%) Strand=Plus/Minus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 618 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 559 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACC 176231 ||||| || | | | || || | | ||| ||||| |||| || ||||| ||||| Sbjct 558 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCACC 500 Query 176232 ACCTGTCGATATCGACGGTATTCGCG-AACCAGTAGCAGGATCTCTACTCTATGGAAACA 176290 || || ||||| || |||||||| | |||| || | |||||| |||| || ||||||| Sbjct 499 TCCGGTAGATATTGATGGTATTCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACA 440 Query 176291 ACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAA 176350 | || || || || || | |||| | || || || || | ||||| ||||||| Sbjct 439 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 380 Query 176351 TCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTG 176410 | |||||||| || | ||||| |||||| | ||||| || || || || | || ||| Sbjct 379 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 320 Query 176411 TATTCCACTTCCTTATCGGTATCTCAGCTTAC---ATGGGACGCCAATGGGAACTTAGTT 176467 | | |||||| | | ||| | ||||| | ||||| || | ||||||||||||| Sbjct 319 TTCTACACTTCTTACTTGGTGT---AGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTT 263 Query 176468 ACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGA 176527 | | || || ||||| |||||||| ||||||||| || || || || | || || | Sbjct 262 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 203 Query 176528 TGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTG 176587 || |||||| | |||| ||| | ||||||||| || ||||| ||||||||||| | Sbjct 202 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 143 Query 176588 GCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGC 176647 | || || ||||| |||||||| ||| ||||||||||||| ||||||||||| || |||| Sbjct 142 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 83 Query 176648 ACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGC 176707 ||||||| || ||||| || || || ||||| ||||| || || || ||| || |||| Sbjct 82 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGC 23 Query 176708 ACGG 176711 | || Sbjct 22 ATGG 19 >seq929 Length=1222 Score = 315 bits (348), Expect = 9e-81 Identities = 427/590 (72%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 637 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 696 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTT-GCATTTATTGCAGCAC 176230 ||||| || | | | || || | | ||| ||||| || || || ||||| |||| Sbjct 697 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTAGCTTTCATTGCTGCAC 755 Query 176231 CACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACA 176290 | || || ||||| || |||||||| ||||| || | |||||| |||| || ||||||| Sbjct 756 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 815 Query 176291 ACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAA 176350 | || || || || || | |||| | || || || || | ||||| ||||||| Sbjct 816 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 875 Query 176351 TCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTG 176410 | |||||||| || | ||||| |||||| | ||||| || || || || | || ||| Sbjct 876 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 935 Query 176411 TATTCCACTTCCTTATCGGTATCTCAGCTTAC---ATGGGACGCCAATGGGAACTTAGTT 176467 | | |||||| | | ||| | ||||| | ||||| || | ||||||||||||| Sbjct 936 TTCTACACTTCTTACTTGGTGT---AGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTT 992 Query 176468 ACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGA 176527 | | || || ||||| |||||||| ||||||||| || || || || | || || | Sbjct 993 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 1052 Query 176528 TGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTG 176587 || |||||| | |||| ||| | ||||||||| || ||||| ||||||||||| | Sbjct 1053 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 1112 Query 176588 GCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGC 176647 | || || ||||| |||||||| ||| ||||||||||||| ||||||||||| || |||| Sbjct 1113 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 1172 Query 176648 ACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTC 176697 ||||||| || ||||| || || || ||||| ||||| || || || ||| Sbjct 1173 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq793 Length=1101 Score = 145 bits (160), Expect = 9e-30 Identities = 209/289 (72%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCAT-ACCGTCAGAGAGATACCGTGGTC 19353 ||| ||||| | || |||||||| || ||| | || |||| | ||| | | |||||||| Sbjct 176 ACCCGTAACTATTCAATATCCTTATGAAAAATTAATCACCG-CGGAGCGTTTCCGTGGTC 234 Query 19354 GTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTA 19413 | || || | ||| ||||| || ||||| || ||||| || ||||| | ||||| |||| Sbjct 235 GAATTCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGGGTATGTCCTA 294 Query 19414 TCAATCTACCAGTGGTGGATTGGGTGATG--AACAAACAGAC-AAAGAAGAAAGAACTTA 19470 | ||||||| || || |||||| || |||| | | | |||||| | ||||| Sbjct 295 TAGATCTACCCGTTGTTGATTGGAAATTGGAAACAGATATTCGAAAGAAACGATTACTTA 354 Query 19471 GAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCC 19530 |||| || || || ||| ||||| || || ||||| || || |||||||| | Sbjct 355 ---ATTACAGTATTGATTTCGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTC 411 Query 19531 CAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 ||||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 412 CAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 460 >seq721 Length=1010 Score = 145 bits (160), Expect = 9e-30 Identities = 209/289 (72%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCAT-ACCGTCAGAGAGATACCGTGGTC 19353 ||| ||||| | || |||||||| || ||| | || |||| | ||| | | |||||||| Sbjct 548 ACCCGTAACTATTCAATATCCTTATGAAAAATTAATCACCG-CGGAGCGTTTCCGTGGTC 490 Query 19354 GTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTA 19413 | || || | ||| ||||| || ||||| || ||||| || ||||| | ||||| |||| Sbjct 489 GAATTCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGGGTATGTCCTA 430 Query 19414 TCAATCTACCAGTGGTGGATTGGGTGATG--AACAAACAGAC-AAAGAAGAAAGAACTTA 19470 | ||||||| || || |||||| || |||| | | | |||||| | ||||| Sbjct 429 TAGATCTACCCGTTGTTGATTGGAAATTGGAAACAGATATTCGAAAGAAACGATTACTTA 370 Query 19471 GAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCC 19530 |||| || || || ||| ||||| || || ||||| || || |||||||| | Sbjct 369 ---ATTACAGTATTGATTTCGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTC 313 Query 19531 CAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 ||||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 312 CAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 264 >seq2704 Length=1012 Score = 132 bits (146), Expect = 6e-26 Identities = 217/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 678 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 737 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACC 176231 ||||| || | | | || || | | ||| ||||| |||| || ||||| ||||| Sbjct 738 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCACC 796 Query 176232 ACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAA 176291 || || ||||| || |||||||| ||||| || | |||||| |||| || |||||||| Sbjct 797 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 856 Query 176292 CATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAAT 176351 || || || || || | |||| | || || || || | ||||| |||||||| Sbjct 857 TATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 916 Query 176352 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411 |||||||| || | ||||| |||||| | ||||| || || || || | || |||| Sbjct 917 ATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGT 976 Query 176412 ATTCCACTTC 176421 | |||||| Sbjct 977 TCTACACTTC 986 >seq2773 Length=1351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 19386 TGTGAGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTGGTGGATTGGGTGATG--A 19443 ||||| || ||||| | ||||| ||||| ||||||| || || |||||| || | Sbjct 1349 TGTGAAGTATGTGTTCGGGTATGTCCTATAGATCTACCCGTTGTTGATTGGAAATTGGAA 1290 Query 19444 ACAAACAGAC-AAAGAAGAAAGAACTTAGAAATTATTCGATAGACTTTGGAGCATGTATT 19502 ||| | | | |||||| | ||||| |||| || || || ||| ||||| Sbjct 1289 ACAGATATTCGAAAGAAACGATTACTTA---ATTACAGTATTGATTTCGGAATCTGTATA 1233 Query 19503 TTCTGCGGTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCCATGACAGAAGAATAT 19562 || || ||||| || || |||||||| |||||||| ||| |||| ||||| ||||||||| Sbjct 1232 TTTTGTGGTAATTGTGTTGAGTATTGTCCAACAAATTGTTTATCAATGACTGAAGAATAT 1173 Query 19563 GAATTGGCTACATTTGA 19579 ||| | |||| | ||| Sbjct 1172 GAACTTTCTACTTATGA 1156 >seq672 Length=1075 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 177001 GTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCAC 177060 || ||| ||| |||| ||||| | ||||| || || |||||||||||||||||||| Sbjct 1061 GTAATTAATACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCAT 1002 Query 177061 GAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 || ||||||||||| || ||||| || ||||| ||||||| Sbjct 1001 GAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTG 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603471406863360