Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq3048 82.4 2e-11 seq2816 82.4 2e-11 >seq3048 Length=155691 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 37638 CGGGGTAGAGCAGCGTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 37579 Query 21210 CTGTCTCCGCAAC 21222 | ||||||||||| Sbjct 37578 CCGTCTCCGCAAC 37566 >seq2816 Length=1062 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 795 CGGGGTAGAGCAGCGTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 854 Query 21210 CTGTCTCCGCAAC 21222 | ||||||||||| Sbjct 855 CCGTCTCCGCAAC 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162518917414864