Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq3048 650 0.0 seq2811 529 2e-145 seq2823 414 1e-110 seq838 378 8e-100 seq929 351 1e-91 seq990 219 5e-52 seq2704 147 2e-30 seq672 105 7e-18 >seq3048 Length=155691 Score = 650 bits (720), Expect = 0.0 Identities = 747/996 (75%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||| ||| |||| ||||| || ||| | || | || ||||| || || || Sbjct 1417 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1358 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || || || ||||| | ||| | Sbjct 1357 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCAC 1300 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || ||||| || |||| || | | || ||||||| Sbjct 1299 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 1240 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| | Sbjct 1239 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 1180 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| || | | || |||||| | ||||||||||| |||| | || ||| Sbjct 1179 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 1120 Query 164226 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 164283 | | |||||| | |||| | || |||| | ||||||||||||||||||||| || Sbjct 1119 TTCTACACTTCTTACTTGGTGTAGCT-TGCT-ATATGGGTCGTGAGTGGGAACTTAGTTT 1062 Query 164284 CCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 164343 |||||| |||||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 1061 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1002 Query 164344 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 164403 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| || Sbjct 1001 TGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 942 Query 164404 CATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCA 164463 |||||||| || ||||||| |||| | || ||||| ||||||||||||||||| ||||| Sbjct 941 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 882 Query 164464 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 164523 ||| || || ||||| || || || ||||| ||||||||||| || |||||||| ||||| Sbjct 881 CCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCA 822 Query 164524 CGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTA 164583 ||||| |||| || ||| || | | || ||||| |||||||| || || | Sbjct 821 TGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 762 Query 164584 TGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTT 164643 ||||||| || ||||| || ||||||||||| || ||||| |||||||| ||||| || Sbjct 761 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 702 Query 164644 TGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 164703 ||| || |||| |||||||| ||| |||||||| || ||||| | ||||||||| | Sbjct 701 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTT 642 Query 164704 CGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATT 164763 || || |||||||| || ||||||||||| || ||| | || | ||||| ||||| || Sbjct 641 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTT 582 Query 164764 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164823 |||| | || ||||| || ||||| || || | | ||| |||| |||||||| | || Sbjct 581 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 522 Query 164824 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAA 164883 || ||||| || || ||||||| ||| ||| || |||||||| ||||| || ||||| Sbjct 521 TACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAA 462 Query 164884 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||| || |||||||| ||||| ||||||| ||| Sbjct 461 TGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 426 Score = 567 bits (628), Expect = 8e-157 Identities = 722/991 (73%), Gaps = 2/991 (0%) Strand=Plus/Plus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||||||||||||||| || |||||||| || | || ||||| ||| ||| | Sbjct 33698 AGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTC 33757 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | ||||||||| | || || || || || || || |||||||| || ||| | Sbjct 33758 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTA 33817 Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359 || ||||||||| | || ||| ||||| | || || |||||||| || || || || Sbjct 33818 GCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTTTCCACCCCTGCTAAC 33877 Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419 | | | || ||| | || | |||||||||||||| | ||||| || || | || Sbjct 33878 AGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 33937 Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479 ||||| ||| | || || || ||||| ||||| || || ||||| || || | ||| ||| Sbjct 33938 TGGTGTCAATTGGGCGGTCTGTGGACCTTTGTCGCTCTGCACGGCGCTTTCGGACTAATA 33997 Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538 ||||||||| | || || |||||||| || ||| || || | | || ||||| ||||| Sbjct 33998 GGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGC 34056 Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598 ||||| ||||| ||||| |||||||| || ||| ||| || || || ||||| || || Sbjct 34057 AATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGG 34116 Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658 || || |||||||| || || || || || ||||| || || |||||| | || Sbjct 34117 TCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCT 34176 Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718 ||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || || Sbjct 34177 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGG 34236 Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778 | || |||| || || | | || |||||||||| ||| ||||| |||||||| | Sbjct 34237 GGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATT 34296 Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838 |||||||||||| ||||| || ||| || ||| | ||||| | || ||||| Sbjct 34297 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAAC 34356 Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898 ||||||||||||||| |||||||| || ||||| || || ||||| ||||||| ||| Sbjct 34357 TTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 34416 Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958 ||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 34417 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGC 34476 Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018 | |||| | | ||||| || || || || ||||| ||||| || || |||||||| || Sbjct 34477 TCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 34536 Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078 | || || || ||||| || ||||| || ||||| || ||||| || ||| | || || Sbjct 34537 CCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGA 34596 Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138 ||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||||||| Sbjct 34597 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 34656 Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || | || | || ||||| |||||| Sbjct 34657 GGAGGTTCTACCCCGTGGAAACGCTCTTTAA 34687 >seq2811 Length=1036 Score = 529 bits (586), Expect = 2e-145 Identities = 688/946 (73%), Gaps = 4/946 (0%) Strand=Plus/Plus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||||||||||||||| || |||||||| || | || ||||| ||| ||| | Sbjct 92 AGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTC 151 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | ||||||||| | || || || || || || || |||||||| || ||| | Sbjct 152 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTA 211 Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359 || ||||||||| | || ||| ||||| | || || |||||||| || || || || Sbjct 212 GCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTTTCCACCCCTGCTAAC 271 Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419 | | | || ||| | || | |||||||||||||| | ||||| || || | || Sbjct 272 AGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 331 Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479 ||||| ||| | || || || ||||| |||| | | || ||||| || || | ||| ||| Sbjct 332 TGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG-CTCTGCACGGCGCTTTCGGACTAATA 390 Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538 ||||||||| | || || |||||||| || ||| || || | | || ||||| ||||| Sbjct 391 GGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGC 449 Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598 ||||| ||||| ||||| |||||||| || ||| ||| || || || ||||| || || Sbjct 450 AATTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGG 509 Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGC-AGCAATCTTCCGATTCCTGC 165657 || || |||||||| || || || || || || ||| || || |||||| | | Sbjct 510 TCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCTAGCTATATTTCGATTCATCC 569 Query 165658 TCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAG 165717 |||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || | Sbjct 570 TCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTG 629 Query 165718 GTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGT 165777 | | || |||| || || | | || |||||||||| ||| ||||| |||||||| | Sbjct 630 GGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTAT 689 Query 165778 ATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAA 165837 |||||||||||| ||||| || ||| || ||| | ||||| | || |||| Sbjct 690 TTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAA 749 Query 165838 CTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCA 165897 |||||||||||||||| |||||||| || ||||| || || ||||| ||||||| || Sbjct 750 CTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 809 Query 165898 ATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTT 165957 |||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| Sbjct 810 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTG 869 Query 165958 CTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGA 166017 || |||| | | ||||| || || || || ||||| ||||| || || |||||||| | Sbjct 870 CTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 929 Query 166018 TTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATG 166077 | | || || || ||||| || ||||| || ||||| || ||||| || ||| | || | Sbjct 930 TCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACG 989 Query 166078 AAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAA 166123 |||| | ||||| ||| |||| || ||| || |||||||| || Sbjct 990 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 1035 >seq2823 Length=1025 Score = 414 bits (458), Expect = 1e-110 Identities = 425/553 (77%), Gaps = 2/553 (0%) Strand=Plus/Plus Query 164369 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCTTCAACTACATG 164428 |||||||| || ||||| | |||||||| || |||||||| || ||||||| |||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 164429 TTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCCCTTCC-ATATGCTCGGCGTAGC 164487 | || ||||| ||||||||||||||||| |||||||| || | | ||||| || || || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 164488 AGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCT 164547 ||||| ||||||||||| || |||||||| ||||| ||||| |||| || ||| | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 190 Query 164548 GGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGA 164607 | | | || ||||| |||||||| || || | ||||||| || ||||| || || Sbjct 191 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 250 Query 164608 AGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGC 164667 ||||||||| || ||||| |||||||| ||||| ||||| || |||| |||||||| || Sbjct 251 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 310 Query 164668 TTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTAT 164727 | |||||||| || ||||| | ||||||||| | || || |||||||| || ||||| Sbjct 311 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 370 Query 164728 CTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 164787 |||||| || ||| | || | ||||| ||||| |||||| | || ||||| || ||||| Sbjct 371 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 430 Query 164788 CCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCG 164847 || || | | ||| |||| |||||||| | || || ||||| || || ||||||| Sbjct 431 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 490 Query 164848 TG-CTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACC 164906 | || ||| || |||||||| ||||| || ||||||||||| || |||||||| |||| Sbjct 491 CGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACC 550 Query 164907 TTGCTGCTGCTGA 164919 | ||||||| ||| Sbjct 551 TAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 378 bits (418), Expect = 8e-100 Identities = 462/620 (75%), Gaps = 9/620 (1%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||| ||| |||| ||||| || ||| | || | || ||||| || || || Sbjct 618 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 559 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || || || ||||| | ||| | Sbjct 558 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCAC 501 Query 164046 CTCCTGTGGACATCGATGGCATCCGCG-AACCCGTCGCTGGTTCGCTCATGTATGGAAAC 164104 |||| || || || ||||| || || | |||| || |||| || | | || |||||| Sbjct 500 CTCCGGTAGATATTGATGGTATTCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAAC 441 Query 164105 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 164164 || || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| Sbjct 440 AATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 381 Query 164165 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 164224 || |||||||| || | | || |||||| | ||||||||||| |||| | || || Sbjct 380 ATATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATT 321 Query 164225 GTGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTT 164282 || | |||||| | |||| | || |||| | ||||||||||||||||||||| || Sbjct 320 GTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ATATGGGTCGTGAGTGGGAACTTAGTT 263 Query 164283 ACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 164342 |||||| |||||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 262 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 203 Query 164343 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 164402 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| | Sbjct 202 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 143 Query 164403 GCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGC 164462 | |||||||| || ||||||| |||| | || ||||| ||||||||||||||||| |||| Sbjct 142 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 83 Query 164463 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGC 164522 |||| || || ||||| || || || ||||| ||||||||||| || |||||||| |||| Sbjct 82 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGC 23 Query 164523 ACGGTTCGCTGGTTACTTCT 164542 | ||||| |||| || ||| Sbjct 22 ATGGTTCTTTGGTAACCTCT 3 >seq929 Length=1222 Score = 351 bits (388), Expect = 1e-91 Identities = 438/590 (74%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||| ||| |||| ||||| || ||| | || | || ||||| || || || Sbjct 637 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 696 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATC-GCCTTCATCGGTGCT 164044 ||||| |||| | | | | | || ||| | ||| || || || || ||||| | ||| Sbjct 697 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTAGCTTTCATTGCTGCA 754 Query 164045 CCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 164104 ||||| || || || ||||| || || ||||| || |||| || | | || |||||| Sbjct 755 CCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAAC 814 Query 164105 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 164164 || || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| Sbjct 815 AATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 874 Query 164165 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 164224 || |||||||| || | | || |||||| | ||||||||||| |||| | || || Sbjct 875 ATATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATT 934 Query 164225 GTGTTCCACTTCCTGATTG--GCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTT 164282 || | |||||| | ||| | | || ||| || ||||||||||||||||||||| || Sbjct 935 GTTCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTT 992 Query 164283 ACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 164342 |||||| |||||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 993 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 1052 Query 164343 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 164402 ||| || ||| || |||| || | |||||||| || ||||| | |||||||| | Sbjct 1053 CTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAG 1112 Query 164403 GCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGC 164462 | |||||||| || ||||||| |||| | || ||||| ||||||||||||||||| |||| Sbjct 1113 GAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGC 1172 Query 164463 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTC 164512 |||| || || ||||| || || || ||||| ||||||||||| || ||| Sbjct 1173 ACCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 219 bits (242), Expect = 5e-52 Identities = 294/404 (73%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 165769 ATACTTTGTATGAAGAT-GGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAG 165827 ||||||| | ||||||| ||||| |||| || ||| || ||| | ||||| Sbjct 1011 ATACTTTATTTGAAGATTGGTGATGGTGCAAT-ACATTCCGTGCTTTTAACCCAACTCAA 953 Query 165828 GAAGAGGAAACTTATTCCATGGTCACTGCTAACCG-TTTCTGGTCTCAGATTTTTGGTAT 165886 | || |||||||||||||||||||| |||||||| ||| ||||| || || ||||| | Sbjct 952 GCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTGGTCCCAAATCTTTGGGGT 893 Query 165887 TGCTTTCAGCAATAAGCG-TTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGAC 165945 |||||| |||||| || |||| | || ||||||||| | ||||| || || | || Sbjct 892 TGCTTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 833 Query 165946 TTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTG 166005 | |||| ||| || |||| | | ||||| || || || || ||||| ||||| || | Sbjct 832 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCG 773 Query 166006 TGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACA 166065 | |||||||| || | || || || ||||| || ||||| || ||||| || ||||| | Sbjct 772 TTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATA 713 Query 166066 TCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACT 166125 | ||| | || ||||| | ||||| ||| |||| || ||| || |||||||| ||| Sbjct 712 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 653 Query 166126 TTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || | |||||||| || || | || | || ||||| |||||| Sbjct 652 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 609 >seq2704 Length=1012 Score = 147 bits (162), Expect = 2e-30 Identities = 227/319 (71%), Gaps = 4/319 (1%) Strand=Plus/Plus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||| ||| |||| ||||| || ||| | || | || ||||| || || || Sbjct 678 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 737 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || || || ||||| | ||| | Sbjct 738 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCAC 795 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || ||||| || |||| || | | || ||||||| Sbjct 796 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 855 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || || || ||||| |||||||| ||||| ||||| ||| ||||||| ||||| | Sbjct 856 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 915 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| || | | || |||||| | ||||||||||| |||| | || ||| Sbjct 916 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 975 Query 164226 TGTTCCACTTCCTGATTGG 164244 | | |||||| | |||| Sbjct 976 TTCTACACTTCTTACTTGG 994 >seq672 Length=1075 Score = 105 bits (116), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 164802 ATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCA 164861 || |||| |||||||| | || || ||||| || || ||||||| ||| ||| || | Sbjct 1075 ATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTA 1016 Query 164862 TGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 ||||||| ||||| || ||||||||||| || |||||||| ||||| ||||||| ||| Sbjct 1015 TGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557633153367360