Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq3048 646 1e-180 seq2811 491 5e-134 seq2823 419 3e-112 seq838 372 4e-98 seq929 343 2e-89 seq990 205 1e-47 seq2704 159 4e-34 seq1012 136 5e-27 seq672 102 1e-16 >seq3048 Length=155691 Score = 646 bits (716), Expect = 1e-180 Identities = 747/997 (75%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||| ||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 1417 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1358 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || | |||||| | ||||| || Sbjct 1357 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACC 1299 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || | | || || ||||| Sbjct 1298 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 1239 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || | ||| ||||| ||||| ||| | ||||| || || || Sbjct 1238 TATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 1179 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| |||||| | ||||| ||| | ||||| ||||| |||| | || || | Sbjct 1178 ATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGT 1119 Query 177897 CTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTAC 177954 | |||||| | | ||| | || ||| || ||||||||||||||||||||| || | Sbjct 1118 TCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTC 1061 Query 177955 CGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCT 178014 || || |||||||| || ||||| ||| ||||| || ||||| || || || || || Sbjct 1060 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 1001 Query 178015 GCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGT 178074 ||||| ||| | | || || | |||||||| || ||||||| |||||| || || Sbjct 1000 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGA 941 Query 178075 ATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCAC 178134 ||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| |||||| Sbjct 940 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCAC 881 Query 178135 CCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCAC 178194 || || |||||| | || || |||||||| ||||| ||||| || |||||||| ||||| Sbjct 880 CCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCAT 821 Query 178195 GGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTA 178253 |||||| |||| || || | | | | || | |||||||| || || ||| | || | Sbjct 820 GGTTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 762 Query 178254 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTT 178313 ||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| || Sbjct 761 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 702 Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373 || || ||||||||||||| || |||||||| || ||||| | ||||||||| | Sbjct 701 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTT 642 Query 178374 CGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATT 178433 || || |||||||| || |||||||||||||| ||| | ||| | ||||| ||||| || Sbjct 641 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTT 582 Query 178434 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAA 178493 |||| | || ||||| || ||||| || || | | |||||||| || || | || Sbjct 581 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 522 Query 178494 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAA 178553 || ||||| || || ||||||| ||| ||||||||||||||| ||||| || ||||| Sbjct 521 TACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGTAA 462 Query 178554 TGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||||| || |||||||| ||||| ||||||| |||| Sbjct 461 TGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGAA 425 Score = 527 bits (584), Expect = 7e-145 Identities = 727/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| || Sbjct 33671 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 33730 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| || ||||| || Sbjct 33731 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 33790 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || ||||| ||| | Sbjct 33791 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 33850 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || || |||||| || | | | ||| || | | | ||||||||| Sbjct 33851 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 33910 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || || ||| | ||||| Sbjct 33911 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTC 33970 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || || ||||| || |||| || |||||||||||| | || || |||||| | || || Sbjct 33971 GCTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 34030 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| |||||||| || || || |||||||||||||| ||||| Sbjct 34031 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 34089 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || ||||| |||||||||||||| ||||| Sbjct 34090 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 34149 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || ||||| || || || ||| | ||||| | || || || || || ||||| | || Sbjct 34150 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34209 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || || || | |||||| || || | || || ||||| Sbjct 34210 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34269 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||||||||| ||||| || || | |||||||| |||| ||||||||||| || Sbjct 34270 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34329 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 34330 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTC 34389 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 34390 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 34449 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | | ||||| || || ||||| | Sbjct 34450 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACG 34509 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 || |||||||| ||||| || || ||| | || || || |||||||| || ||||| || Sbjct 34510 TGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 34569 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 ||| ||||| || || || || || |||||| | |||||||||||||| | ||||| Sbjct 34570 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 34629 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 34630 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34683 >seq2811 Length=1036 Score = 491 bits (544), Expect = 5e-134 Identities = 696/973 (72%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| || Sbjct 65 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 124 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| || ||||| || Sbjct 125 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 184 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || ||||| ||| | Sbjct 185 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 244 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || || |||||| || | | | ||| || | | | ||||||||| Sbjct 245 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 304 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || || ||| | |||| | Sbjct 305 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG 364 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 | || ||||| || |||| || |||||||||||| | || || |||||| | || || Sbjct 365 -CTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 423 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| |||||||| || || || |||||||||||||| ||||| Sbjct 424 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 482 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || ||||| |||||||||||||| ||||| Sbjct 483 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 542 Query 179318 AGTTGC-AGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCA 179376 || || ||| || || || ||| | ||||| | || || || || || ||||| | | Sbjct 543 TGTAGCTAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 602 Query 179377 ACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTC 179436 |||| || || |||||||| || || || | |||||| || || | || || |||| Sbjct 603 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTC 662 Query 179437 ATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGG 179496 |||||||||| ||||| || || | |||||||| |||| ||||||||||| | Sbjct 663 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 722 Query 179497 CATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGT 179556 | || | || || |||| || || || ||||| ||||| || || ||||| || |||| Sbjct 723 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGT 782 Query 179557 CTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTG 179616 | || |||||||| | || || |||||| |||||| |||||||||||||||| |||| Sbjct 783 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 842 Query 179617 TTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTA 179676 | || || | ||| | |||| | |||| | | ||||| || || ||||| Sbjct 843 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTAC 902 Query 179677 GAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGT 179736 | || |||||||| ||||| || || ||| | || || || |||||||| || ||||| | Sbjct 903 GTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTT 962 Query 179737 TCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATC 179796 |||| ||||| || || || || || |||||| | |||||||||||||| | |||| Sbjct 963 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1022 Query 179797 AACCACATGAAAA 179809 | || |||||||| Sbjct 1023 AGCCTCATGAAAA 1035 >seq2823 Length=1025 Score = 419 bits (464), Expect = 3e-112 Identities = 429/555 (77%), Gaps = 4/555 (1%) Strand=Plus/Plus Query 178039 GGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATG 178098 |||||||| || ||||||| |||||| || || ||| ||| || ||||||| |||| Sbjct 11 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 70 Query 178099 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCC-ACATGTTGGGCGTCGC 178157 |||| |||||||| |||||||||||||| |||||||| || | ||||| | || || || Sbjct 71 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGCTAGGTGTGGC 130 Query 178158 TGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCT 178217 |||||| ||||| ||||| || |||||||| ||||| |||||| |||| || || | | | Sbjct 131 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGTT 189 Query 178218 GGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAG 178276 | || | |||||||| || || ||| | || | ||||||| ||||||||||| | Sbjct 190 TGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGG 249 Query 178277 AAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACG 178336 |||| ||||| || ||||| || ||||||||||| || || || ||||||||||||| | Sbjct 250 AAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATG 309 Query 178337 CATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTA 178396 | |||||||| || ||||| | ||||||||| | || || |||||||| || |||| Sbjct 310 CTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTA 369 Query 178397 TCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCA 178456 |||||||||| ||| | ||| | ||||| ||||| |||||| | || ||||| || |||| Sbjct 370 TCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCA 429 Query 178457 ACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACC 178516 | || || | | |||||||| || || | || || ||||| || || |||||| Sbjct 430 ATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACC 489 Query 178517 GTG-CTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGAC 178575 | | || ||||||||||||||| ||||| || ||||||||||| || |||||||| ||| Sbjct 490 GCGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGAC 549 Query 178576 CTCGCTGCTGCTGAA 178590 || ||||||| |||| Sbjct 550 CTAGCTGCTGTTGAA 564 >seq838 Length=1002 Score = 372 bits (412), Expect = 4e-98 Identities = 458/618 (74%), Gaps = 7/618 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||| ||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 618 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 559 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || | |||||| | ||||| || Sbjct 558 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACC 500 Query 177717 TCCTGTGGACATCGACGGCATCCGTG-AACCCGTCGCTGGTTCCCTGATGTATGGCAACA 177775 ||| || || || || || || |||| |||| || |||| || | | || || |||| Sbjct 499 TCCGGTAGATATTGATGGTATTCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACA 440 Query 177776 ACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCA 177835 | || ||||| ||||| || | ||| ||||| ||||| ||| | ||||| || || | Sbjct 439 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 380 Query 177836 TCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTA 177895 | |||||||| |||||| | ||||| ||| | ||||| ||||| |||| | || || Sbjct 379 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 320 Query 177896 TCTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTA 177953 | | |||||| | | ||| | || ||| || ||||||||||||||||||||| || Sbjct 319 TTCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTT 262 Query 177954 CCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATC 178013 ||| || |||||||| || ||||| ||| ||||| || ||||| || || || || | Sbjct 261 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 202 Query 178014 TGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGG 178073 |||||| ||| | | || || | |||||||| || ||||||| |||||| || || Sbjct 201 TGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 142 Query 178074 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCA 178133 ||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| ||||| Sbjct 141 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 82 Query 178134 CCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCA 178193 ||| || |||||| | || || |||||||| ||||| ||||| || |||||||| ||||| Sbjct 81 CCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCA 22 Query 178194 CGGTTCTCTGGTTACTTC 178211 |||||| |||| || || Sbjct 21 TGGTTCTTTGGTAACCTC 4 >seq929 Length=1222 Score = 343 bits (380), Expect = 2e-89 Identities = 433/589 (74%), Gaps = 7/589 (1%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||| ||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 637 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 696 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT--TTCATCGTCGCTTTCGTCGCTGCTC 177715 ||||||||||| | | | || || ||||| || | | |||||| | ||||| | Sbjct 697 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCAC 755 Query 177716 CTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACA 177775 |||| || || || || || || |||||||| || |||| || | | || || |||| Sbjct 756 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 815 Query 177776 ACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCA 177835 | || ||||| ||||| || | ||| ||||| ||||| ||| | ||||| || || | Sbjct 816 ATATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 875 Query 177836 TCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTA 177895 | |||||||| |||||| | ||||| ||| | ||||| ||||| |||| | || || Sbjct 876 TATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTG 935 Query 177896 TCTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTA 177953 | | |||||| | | ||| | || ||| || ||||||||||||||||||||| || Sbjct 936 TTCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTT 993 Query 177954 CCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATC 178013 ||| || |||||||| || ||||| ||| ||||| || ||||| || || || || | Sbjct 994 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1053 Query 178014 TGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGG 178073 |||||| ||| | | || || | |||||||| || ||||||| |||||| || || Sbjct 1054 TGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 1113 Query 178074 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCA 178133 ||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| ||||| Sbjct 1114 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1173 Query 178134 CCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTC 178182 ||| || |||||| | || || |||||||| ||||| ||||| || ||| Sbjct 1174 CCCATTTCACATGCTAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 205 bits (226), Expect = 1e-47 Identities = 269/370 (73%), Gaps = 2/370 (1%) Strand=Plus/Minus Query 179484 AATACATTCAAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCC 179543 ||||||||| || || | || || |||| || || || ||||| ||||| || || Sbjct 982 AATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCT 923 Query 179544 AACCG-TTTCTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTT-GGCTACATT 179601 ||||| ||| ||||| || |||||||| | || || |||||| |||| || |||||| Sbjct 922 AACCGCTTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTTGGTTACATT 863 Query 179602 TCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTC 179661 |||||||||| ||||| || || | ||| | |||| | |||| | | |||| Sbjct 862 TCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTC 803 Query 179662 TTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATC 179721 | || || ||||| | || |||||||| ||||| || || ||| | || || || |||| Sbjct 802 TGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATC 743 Query 179722 CTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGA 179781 |||| || ||||| ||||| ||||| || || || || || |||||| | |||||||||| Sbjct 742 CTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGA 683 Query 179782 TGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAG 179841 |||| | ||||| || ||||||||| || |||| ||||| || || | || | | Sbjct 682 TGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTG 623 Query 179842 GCAACGCTCT 179851 | |||||||| Sbjct 622 GAAACGCTCT 613 >seq2704 Length=1012 Score = 159 bits (176), Expect = 4e-34 Identities = 209/287 (73%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||| ||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 678 TTTTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 737 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || | |||||| | ||||| || Sbjct 738 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACC 796 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || | | || || ||||| Sbjct 797 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 856 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || | ||| ||||| ||||| ||| | ||||| || || || Sbjct 857 TATTATTTCCGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 916 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTT 177883 |||||||| |||||| | ||||| ||| | ||||| ||||| |||| Sbjct 917 ATGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGCCCTT 963 >seq1012 Length=1043 Score = 136 bits (150), Expect = 5e-27 Identities = 179/248 (72%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 179604 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTT 179663 |||||||| ||||| || || | ||| | |||| | |||| | | ||||| Sbjct 1043 TTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTG 984 Query 179664 GCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCT 179723 || || ||||| | || |||||||| ||||| || || ||| | || || || |||||| Sbjct 983 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCT 924 Query 179724 GAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATG 179783 || || ||||| ||||| ||||| || || || || || |||||| | |||||||||||| Sbjct 923 GAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATG 864 Query 179784 GCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGC 179843 || | ||||| || ||||||||| || |||| ||||| || || | || | || Sbjct 863 GCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGA 804 Query 179844 AACGCTCT 179851 |||||||| Sbjct 803 AACGCTCT 796 >seq672 Length=1075 Score = 102 bits (112), Expect = 1e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 178492 AACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGT 178551 || || ||||| || || ||||||| ||| ||||||||||||||| ||||| || ||| Sbjct 1055 AATACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAACGT 996 Query 178552 AATGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||||||| || |||||||| ||||| ||||||| |||| Sbjct 995 AATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGAA 957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596284480695680